RNA–Protein interactions for RNA: ENST00000506415.1

FRMD1-207, Transcript of FERM domain containing 1, humanhuman

TSL 4

Gene FRMD1, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1-207ENST00000506415 GPRC5DQ9NZD1 345 aa17.5■□□□□ 0.39
FRMD1-207ENST00000506415 PGAP2Q9UHJ9 254 aa17.5■□□□□ 0.39
FRMD1-207ENST00000506415 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
FRMD1-207ENST00000506415 MKI67P46013 3256 aaKnown RBP17.5■□□□□ 0.39
FRMD1-207ENST00000506415 KCNQ3O43525 872 aa17.49■□□□□ 0.39
FRMD1-207ENST00000506415 GLIS2Q9BZE0 524 aaPredicted RBP17.49■□□□□ 0.39
FRMD1-207ENST00000506415 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
FRMD1-207ENST00000506415 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
FRMD1-207ENST00000506415 NOGQ13253 232 aa17.48■□□□□ 0.39
FRMD1-207ENST00000506415 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
FRMD1-207ENST00000506415 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
FRMD1-207ENST00000506415 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
FRMD1-207ENST00000506415 SLC51AQ86UW1 340 aa17.47■□□□□ 0.39
FRMD1-207ENST00000506415 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
FRMD1-207ENST00000506415 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
FRMD1-207ENST00000506415 SAGE1Q9NXZ1 904 aa17.46■□□□□ 0.39
FRMD1-207ENST00000506415 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
FRMD1-207ENST00000506415 HLFQ16534 295 aa17.45■□□□□ 0.38
FRMD1-207ENST00000506415 ZNF408Q9H9D4 720 aa17.45■□□□□ 0.38
FRMD1-207ENST00000506415 RIC1Q4ADV7 1423 aa17.45■□□□□ 0.38
FRMD1-207ENST00000506415 NPC1L1Q9UHC9 1359 aa17.44■□□□□ 0.38
FRMD1-207ENST00000506415 BTBD11A6QL63 1104 aa17.44■□□□□ 0.38
FRMD1-207ENST00000506415 NBPF26B4DH59 902 aa17.44■□□□□ 0.38
FRMD1-207ENST00000506415 DIAPH1O60610 1272 aaKnown RBP17.44■□□□□ 0.38
FRMD1-207ENST00000506415 HIRAP54198 1017 aaPredicted RBP17.44■□□□□ 0.38
FRMD1-207ENST00000506415 AMER1Q5JTC6 1135 aaPredicted RBP17.44■□□□□ 0.38
FRMD1-207ENST00000506415 NBPF10Q6P3W6 841 aaKnown RBP17.44■□□□□ 0.38
FRMD1-207ENST00000506415 NBPF15Q8N660 670 aa17.44■□□□□ 0.38
FRMD1-207ENST00000506415 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
FRMD1-207ENST00000506415 ZC3H15Q8WU90 426 aaKnown RBP17.44■□□□□ 0.38
FRMD1-207ENST00000506415 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
FRMD1-207ENST00000506415 FAM155AB1AL88 458 aaPredicted RBP17.43■□□□□ 0.38
FRMD1-207ENST00000506415 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
FRMD1-207ENST00000506415 GMPSP49915 693 aaPredicted RBP17.43■□□□□ 0.38
FRMD1-207ENST00000506415 CXCL9Q07325 125 aa17.43■□□□□ 0.38
FRMD1-207ENST00000506415 KNSTRNQ9Y448 316 aa17.43■□□□□ 0.38
FRMD1-207ENST00000506415 PPIP5K2O43314 1243 aa17.42■□□□□ 0.38
FRMD1-207ENST00000506415 HUNKP57058 714 aa17.42■□□□□ 0.38
FRMD1-207ENST00000506415 AOC3Q16853 763 aa17.42■□□□□ 0.38
FRMD1-207ENST00000506415 CDC37L1Q7L3B6 337 aa17.42■□□□□ 0.38
FRMD1-207ENST00000506415 NUTM1Q86Y26 1132 aa17.42■□□□□ 0.38
FRMD1-207ENST00000506415 VPS33BQ9H267 617 aa17.42■□□□□ 0.38
FRMD1-207ENST00000506415 PPEF1O14829 653 aaPredicted RBP17.41■□□□□ 0.38
FRMD1-207ENST00000506415 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
FRMD1-207ENST00000506415 RPGRQ92834 1020 aaKnown RBP17.41■□□□□ 0.38
FRMD1-207ENST00000506415 NYXQ9GZU5 481 aa17.41■□□□□ 0.38
FRMD1-207ENST00000506415 CDHR2Q9BYE9 1310 aa17.41■□□□□ 0.38
FRMD1-207ENST00000506415 TRPM4Q8TD43 1214 aa17.4■□□□□ 0.38
FRMD1-207ENST00000506415 CRAMP1Q96RY5 1269 aa17.4■□□□□ 0.38
FRMD1-207ENST00000506415 RNF186Q9NXI6 227 aa17.4■□□□□ 0.38
FRMD1-207ENST00000506415 ZNRF3Q9ULT6 936 aa17.4■□□□□ 0.38
FRMD1-207ENST00000506415 AKAP11Q9UKA4 1901 aa17.4■□□□□ 0.38
FRMD1-207ENST00000506415 NUP98P52948 1817 aa17.4■□□□□ 0.38
FRMD1-207ENST00000506415 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
FRMD1-207ENST00000506415 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
FRMD1-207ENST00000506415 TCERG1O14776 1098 aaKnown RBP17.38■□□□□ 0.37
FRMD1-207ENST00000506415 TRPA1O75762 1119 aa17.38■□□□□ 0.37
FRMD1-207ENST00000506415 KIF23Q02241 960 aaPredicted RBP17.38■□□□□ 0.37
FRMD1-207ENST00000506415 RGMBQ6NW40 437 aa17.38■□□□□ 0.37
FRMD1-207ENST00000506415 DLK2Q6UY11 383 aa17.38■□□□□ 0.37
FRMD1-207ENST00000506415 RBM17Q96I25 401 aaKnown RBP17.38■□□□□ 0.37
FRMD1-207ENST00000506415 IBTKQ9P2D0 1353 aaPredicted RBP17.38■□□□□ 0.37
FRMD1-207ENST00000506415 HTTP42858 3142 aa17.38■□□□□ 0.37
FRMD1-207ENST00000506415 USP48Q86UV5 1035 aa17.37■□□□□ 0.37
FRMD1-207ENST00000506415 RTFDC1Q9BY42 306 aaPredicted RBP17.37■□□□□ 0.37
FRMD1-207ENST00000506415 CENPFP49454 3210 aa17.37■□□□□ 0.37
FRMD1-207ENST00000506415 CCDC102AQ96A19 550 aa17.36■□□□□ 0.37
FRMD1-207ENST00000506415 HPS5Q9UPZ3 1129 aa17.36■□□□□ 0.37
FRMD1-207ENST00000506415 SHTN1A0MZ66 631 aa17.35■□□□□ 0.37
FRMD1-207ENST00000506415 ERVV-1B6SEH8 477 aa17.35■□□□□ 0.37
FRMD1-207ENST00000506415 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
FRMD1-207ENST00000506415 C3orf67Q6ZVT6 689 aa17.35■□□□□ 0.37
FRMD1-207ENST00000506415 GCC1Q96CN9 775 aa17.35■□□□□ 0.37
FRMD1-207ENST00000506415 BCL2L13Q9BXK5 485 aa17.35■□□□□ 0.37
FRMD1-207ENST00000506415 CNOT7Q9UIV1 285 aaKnown RBP17.35■□□□□ 0.37
FRMD1-207ENST00000506415 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
FRMD1-207ENST00000506415 UBN2Q6ZU65 1347 aa17.35■□□□□ 0.37
FRMD1-207ENST00000506415 BRCA2P51587 3418 aa17.35■□□□□ 0.37
FRMD1-207ENST00000506415 POLR2AP24928 1970 aaKnown RBP17.35■□□□□ 0.37
FRMD1-207ENST00000506415 RAD17O75943 681 aa17.34■□□□□ 0.37
FRMD1-207ENST00000506415 CSRNP1Q96S65 589 aa17.34■□□□□ 0.37
FRMD1-207ENST00000506415 GBA2Q9HCG7 927 aaPredicted RBP17.34■□□□□ 0.37
FRMD1-207ENST00000506415 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
FRMD1-207ENST00000506415 LAMB4A4D0S4 1761 aa17.33■□□□□ 0.37
FRMD1-207ENST00000506415 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
FRMD1-207ENST00000506415 ZNF157P51786 506 aaPredicted RBP17.33■□□□□ 0.36
FRMD1-207ENST00000506415 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.36
FRMD1-207ENST00000506415 KIAA2012Q0VF49 1180 aa17.33■□□□□ 0.36
FRMD1-207ENST00000506415 TNIP1Q15025 636 aa17.33■□□□□ 0.36
FRMD1-207ENST00000506415 SUSD4Q5VX71 490 aa17.33■□□□□ 0.36
FRMD1-207ENST00000506415 SUPT20HQ8NEM7 779 aa17.33■□□□□ 0.36
FRMD1-207ENST00000506415 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.36
FRMD1-207ENST00000506415 MAP3K15Q6ZN16 1313 aa17.32■□□□□ 0.36
FRMD1-207ENST00000506415 NTSR2O95665 410 aa17.32■□□□□ 0.36
FRMD1-207ENST00000506415 SLC10A3P09131 477 aa17.32■□□□□ 0.36
FRMD1-207ENST00000506415 C2orf69Q8N8R5 385 aa17.32■□□□□ 0.36
FRMD1-207ENST00000506415 YDJCA8MPS7 323 aa17.31■□□□□ 0.36
FRMD1-207ENST00000506415 H7C1D1 291 aa17.31■□□□□ 0.36
FRMD1-207ENST00000506415 PKN2Q16513 984 aaKnown RBP17.31■□□□□ 0.36
FRMD1-207ENST00000506415 HABP4Q5JVS0 413 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms