RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 TRIM28Q13263 835 aaKnown RBP9.93□□□□□ -0.82
COL4A5-208ENST00000505728 TTLL7Q6ZT98 887 aa9.93□□□□□ -0.82
COL4A5-208ENST00000505728 ERC1Q8IUD2 1116 aa9.93□□□□□ -0.82
COL4A5-208ENST00000505728 CCDC191Q8NCU4 936 aa9.93□□□□□ -0.82
COL4A5-208ENST00000505728 SMARCC1Q92922 1105 aaPredicted RBP9.93□□□□□ -0.82
COL4A5-208ENST00000505728 SYTL4Q96C24 671 aaPredicted RBP9.93□□□□□ -0.82
COL4A5-208ENST00000505728 STAP2Q9UGK3 403 aa9.93□□□□□ -0.82
COL4A5-208ENST00000505728 AOX1Q06278 1338 aa9.92□□□□□ -0.82
COL4A5-208ENST00000505728 CDC45O75419 566 aa9.92□□□□□ -0.82
COL4A5-208ENST00000505728 CYP19A1P11511 503 aaPredicted RBP9.92□□□□□ -0.82
COL4A5-208ENST00000505728 PDE1AP54750 535 aa9.92□□□□□ -0.82
COL4A5-208ENST00000505728 MAPK8IP2Q13387 824 aaPredicted RBP9.92□□□□□ -0.82
COL4A5-208ENST00000505728 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
COL4A5-208ENST00000505728 KIF6Q6ZMV9 814 aa9.92□□□□□ -0.82
COL4A5-208ENST00000505728 RHPN1Q8TCX5 695 aa9.92□□□□□ -0.82
COL4A5-208ENST00000505728 KAZALD1Q96I82 304 aa9.92□□□□□ -0.82
COL4A5-208ENST00000505728 SGIP1Q9BQI5 828 aa9.92□□□□□ -0.82
COL4A5-208ENST00000505728 CWC25Q9NXE8 425 aaPredicted RBP9.92□□□□□ -0.82
COL4A5-208ENST00000505728 ARFGEF2Q9Y6D5 1785 aa9.92□□□□□ -0.82
COL4A5-208ENST00000505728 AFDNP55196 1824 aaKnown RBP9.91□□□□□ -0.82
COL4A5-208ENST00000505728 SALL3Q9BXA9 1300 aa9.91□□□□□ -0.82
COL4A5-208ENST00000505728 A0A087WZG4 1122 aa9.91□□□□□ -0.82
COL4A5-208ENST00000505728 GSPT1P15170 499 aaKnown RBP9.91□□□□□ -0.82
COL4A5-208ENST00000505728 CASP7P55210 303 aa9.91□□□□□ -0.82
COL4A5-208ENST00000505728 G3BP1Q13283 466 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL4A5-208ENST00000505728 ZNF827Q17R98 1081 aa9.91□□□□□ -0.82
COL4A5-208ENST00000505728 RABL6Q3YEC7 729 aaPredicted RBP9.91□□□□□ -0.82
COL4A5-208ENST00000505728 HSP90AB3PQ58FF7 597 aa9.91□□□□□ -0.82
COL4A5-208ENST00000505728 TBC1D32Q96NH3 1257 aa9.91□□□□□ -0.82
COL4A5-208ENST00000505728 SLC4A9Q96Q91 983 aa9.91□□□□□ -0.82
COL4A5-208ENST00000505728 ISCA1Q9BUE6 129 aa9.91□□□□□ -0.82
COL4A5-208ENST00000505728 BICC1Q9H694 974 aaKnown RBP9.91□□□□□ -0.82
COL4A5-208ENST00000505728 LRRC4BQ9NT99 713 aa9.91□□□□□ -0.82
COL4A5-208ENST00000505728 MAP3K15Q6ZN16 1313 aa9.9□□□□□ -0.82
COL4A5-208ENST00000505728 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
COL4A5-208ENST00000505728 MX1P20591 662 aa9.9□□□□□ -0.82
COL4A5-208ENST00000505728 IL6STP40189 918 aaPredicted RBP9.9□□□□□ -0.82
COL4A5-208ENST00000505728 OS9Q13438 667 aaPredicted RBP9.9□□□□□ -0.82
COL4A5-208ENST00000505728 OTUD7AQ8TE49 926 aaPredicted RBP9.9□□□□□ -0.82
COL4A5-208ENST00000505728 FHDC1Q9C0D6 1143 aaPredicted RBP9.9□□□□□ -0.82
COL4A5-208ENST00000505728 MTFR1LQ9H019 292 aa9.9□□□□□ -0.82
COL4A5-208ENST00000505728 ERVV-1B6SEH8 477 aa9.89□□□□□ -0.83
COL4A5-208ENST00000505728 CASC1Q6TDU7 716 aa9.89□□□□□ -0.83
COL4A5-208ENST00000505728 GIGYF2Q6Y7W6 1299 aaKnown RBP9.89□□□□□ -0.83
COL4A5-208ENST00000505728 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
COL4A5-208ENST00000505728 UBE3BQ7Z3V4 1068 aa9.89□□□□□ -0.83
COL4A5-208ENST00000505728 CLASRPQ8N2M8 674 aaKnown RBP9.89□□□□□ -0.83
COL4A5-208ENST00000505728 SYT17Q9BSW7 474 aa9.89□□□□□ -0.83
COL4A5-208ENST00000505728 C22orf23Q9BZE7 217 aa9.89□□□□□ -0.83
COL4A5-208ENST00000505728 ZBTB3Q9H5J0 574 aa9.89□□□□□ -0.83
COL4A5-208ENST00000505728 COPRSQ9NQ92 184 aa9.89□□□□□ -0.83
COL4A5-208ENST00000505728 TAF1LQ8IZX4 1826 aa9.89□□□□□ -0.83
COL4A5-208ENST00000505728 USP42Q9H9J4 1324 aaKnown RBP9.88□□□□□ -0.83
COL4A5-208ENST00000505728 LOC102724428A0A0B4J2F2 783 aa9.88□□□□□ -0.83
COL4A5-208ENST00000505728 DCAF8L1A6NGE4 600 aa9.88□□□□□ -0.83
COL4A5-208ENST00000505728 PCCAP05165 728 aaPredicted RBP9.88□□□□□ -0.83
COL4A5-208ENST00000505728 SDSP20132 328 aa9.88□□□□□ -0.83
COL4A5-208ENST00000505728 ATP6V1AP38606 617 aa9.88□□□□□ -0.83
COL4A5-208ENST00000505728 RFX5P48382 616 aaPredicted RBP9.88□□□□□ -0.83
COL4A5-208ENST00000505728 MFAP1P55081 439 aaKnown RBP9.88□□□□□ -0.83
COL4A5-208ENST00000505728 SIK1P57059 783 aa9.88□□□□□ -0.83
COL4A5-208ENST00000505728 EPHA10Q5JZY3 1008 aa9.88□□□□□ -0.83
COL4A5-208ENST00000505728 AKT1S1Q96B36 256 aa9.88□□□□□ -0.83
COL4A5-208ENST00000505728 IL1RAPL2Q9NP60 686 aa9.88□□□□□ -0.83
COL4A5-208ENST00000505728 TTC41PQ6P2S7 1318 aa9.87□□□□□ -0.83
COL4A5-208ENST00000505728 RBM25P49756 843 aaKnown RBP9.87□□□□□ -0.83
COL4A5-208ENST00000505728 EIF5P55010 431 aaKnown RBP9.87□□□□□ -0.83
COL4A5-208ENST00000505728 KCNQ4P56696 695 aa9.87□□□□□ -0.83
COL4A5-208ENST00000505728 ERICH6Q7L0X2 663 aa9.87□□□□□ -0.83
COL4A5-208ENST00000505728 PLA2G12BQ9BX93 195 aa9.87□□□□□ -0.83
COL4A5-208ENST00000505728 CCDC87Q9NVE4 849 aa9.87□□□□□ -0.83
COL4A5-208ENST00000505728 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
COL4A5-208ENST00000505728 PA2G4Q9UQ80 394 aaKnown RBP9.87□□□□□ -0.83
COL4A5-208ENST00000505728 ZBTB1Q9Y2K1 713 aa9.87□□□□□ -0.83
COL4A5-208ENST00000505728 TJP1Q07157 1748 aa9.87□□□□□ -0.83
COL4A5-208ENST00000505728 PALLDQ8WX93 1383 aa9.87□□□□□ -0.83
COL4A5-208ENST00000505728 CICQ96RK0 1608 aaPredicted RBP9.86□□□□□ -0.83
COL4A5-208ENST00000505728 ERC2O15083 957 aa9.86□□□□□ -0.83
COL4A5-208ENST00000505728 FOXO4P98177 505 aa9.86□□□□□ -0.83
COL4A5-208ENST00000505728 PTPN12Q05209 780 aaKnown RBP9.86□□□□□ -0.83
COL4A5-208ENST00000505728 BECN1Q14457 450 aa9.86□□□□□ -0.83
COL4A5-208ENST00000505728 INTS5Q6P9B9 1019 aaKnown RBP9.86□□□□□ -0.83
COL4A5-208ENST00000505728 LMBR1LQ6UX01 489 aa9.86□□□□□ -0.83
COL4A5-208ENST00000505728 DZIP3Q86Y13 1208 aaKnown RBP9.86□□□□□ -0.83
COL4A5-208ENST00000505728 NUTM1Q86Y26 1132 aa9.86□□□□□ -0.83
COL4A5-208ENST00000505728 JARID2Q92833 1246 aaPredicted RBP9.86□□□□□ -0.83
COL4A5-208ENST00000505728 GPATCH3Q96I76 525 aa9.86□□□□□ -0.83
COL4A5-208ENST00000505728 ARXQ96QS3 562 aa9.86□□□□□ -0.83
COL4A5-208ENST00000505728 BCL11AQ9H165 835 aa9.86□□□□□ -0.83
COL4A5-208ENST00000505728 ZNF330Q9Y3S2 320 aaPredicted RBP9.86□□□□□ -0.83
COL4A5-208ENST00000505728 ZNF831Q5JPB2 1677 aa9.86□□□□□ -0.83
COL4A5-208ENST00000505728 PNPLA7Q6ZV29 1317 aa9.85□□□□□ -0.83
COL4A5-208ENST00000505728 CDHR2Q9BYE9 1310 aa9.85□□□□□ -0.83
COL4A5-208ENST00000505728 NUP98P52948 1817 aa9.85□□□□□ -0.83
COL4A5-208ENST00000505728 GLRX3O76003 335 aaKnown RBP9.85□□□□□ -0.83
COL4A5-208ENST00000505728 SASH1O94885 1247 aa9.85□□□□□ -0.83
COL4A5-208ENST00000505728 IFIT2P09913 472 aaKnown RBP9.85□□□□□ -0.83
COL4A5-208ENST00000505728 CRKLP46109 303 aaKnown RBP9.85□□□□□ -0.83
COL4A5-208ENST00000505728 ZBTB38Q8NAP3 1195 aaPredicted RBP9.85□□□□□ -0.83
COL4A5-208ENST00000505728 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms