RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 DRC7Q8IY82 874 aa15.69■□□□□ 0.1
LETM1-203ENST00000505551 LOC102724159A0A0B4J2E5 919 aa15.68■□□□□ 0.1
LETM1-203ENST00000505551 STX6O43752 255 aa15.68■□□□□ 0.1
LETM1-203ENST00000505551 DHX16O60231 1041 aaKnown RBP15.68■□□□□ 0.1
LETM1-203ENST00000505551 PLA2G4AP47712 749 aa15.68■□□□□ 0.1
LETM1-203ENST00000505551 TYRO3Q06418 890 aa15.68■□□□□ 0.1
LETM1-203ENST00000505551 PWP2Q15269 919 aaKnown RBP15.68■□□□□ 0.1
LETM1-203ENST00000505551 GTF3C6Q969F1 213 aa15.68■□□□□ 0.1
LETM1-203ENST00000505551 CEP85Q6P2H3 762 aa15.68■□□□□ 0.1
LETM1-203ENST00000505551 SLIT1O75093 1534 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 PNMA6AP0CW24 399 aaPredicted RBP15.67■□□□□ 0.1
LETM1-203ENST00000505551 CDC25BP30305 580 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 PTPN14Q15678 1187 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 TDRD7Q8NHU6 1098 aaKnown RBP15.67■□□□□ 0.1
LETM1-203ENST00000505551 RAD50Q92878 1312 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 HTATSF1O43719 755 aaKnown RBP15.67■□□□□ 0.1
LETM1-203ENST00000505551 SYT1P21579 422 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 UPF3BQ9BZI7 483 aaKnown RBP15.67■□□□□ 0.1
LETM1-203ENST00000505551 CBX8Q9HC52 389 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 USP27XA6NNY8 438 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 MAP3K11Q16584 847 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 CCDC144BQ3MJ40 725 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 TEX35Q5T0J7 233 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 SYT10Q6XYQ8 523 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 CCDC144CPQ8IYA2 1237 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 USHBP1Q8N6Y0 703 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 NEK11Q8NG66 645 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 TRIM5Q9C035 493 aa15.67■□□□□ 0.1
LETM1-203ENST00000505551 PDE1AP54750 535 aa15.66■□□□□ 0.1
LETM1-203ENST00000505551 GNAI1P63096 354 aa15.66■□□□□ 0.1
LETM1-203ENST00000505551 CDK12Q9NYV4 1490 aaPredicted RBP15.66■□□□□ 0.1
LETM1-203ENST00000505551 NEMFO60524 1076 aa15.66■□□□□ 0.1
LETM1-203ENST00000505551 TWISTNBQ3B726 338 aaPredicted RBP15.66■□□□□ 0.1
LETM1-203ENST00000505551 CASQ1P31415 396 aa15.65■□□□□ 0.1
LETM1-203ENST00000505551 CLCN6P51797 869 aa15.65■□□□□ 0.1
LETM1-203ENST00000505551 KCND1Q9NSA2 647 aa15.65■□□□□ 0.1
LETM1-203ENST00000505551 ATG3Q9NT62 314 aa15.65■□□□□ 0.1
LETM1-203ENST00000505551 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
LETM1-203ENST00000505551 RGPD8O14715 1765 aaPredicted RBP15.65■□□□□ 0.1
LETM1-203ENST00000505551 MYO1CO00159 1063 aa15.65■□□□□ 0.1
LETM1-203ENST00000505551 LRRC8AQ8IWT6 810 aa15.65■□□□□ 0.1
LETM1-203ENST00000505551 EYA1Q99502 592 aa15.65■□□□□ 0.1
LETM1-203ENST00000505551 RIMS1Q86UR5 1692 aaKnown RBP15.65■□□□□ 0.1
LETM1-203ENST00000505551 ZRANB2O95218 330 aaKnown RBP eCLIP15.64■□□□□ 0.09
LETM1-203ENST00000505551 TPM4P67936 248 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 CC2D2BQ6DHV5 1058 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 L2HGDHQ9H9P8 463 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 PSME1Q06323 249 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 ICE2Q659A1 982 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 KRBA2Q6ZNG9 492 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 ORAI2Q96SN7 254 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 UBXN6Q9BZV1 441 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 NUP62CLQ9H1M0 184 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 PHF8Q9UPP1 1060 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 OVOS2A0A0J9YW53 1432 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 OVOS2Q6IE36 1432 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 ITSN1Q15811 1721 aa15.64■□□□□ 0.09
LETM1-203ENST00000505551 GTF2A1P52655 376 aaPredicted RBP15.63■□□□□ 0.09
LETM1-203ENST00000505551 DNM1Q05193 864 aaKnown RBP15.63■□□□□ 0.09
LETM1-203ENST00000505551 MTHFSDQ2M296 383 aaKnown RBP15.63■□□□□ 0.09
LETM1-203ENST00000505551 ANO6Q4KMQ2 910 aa15.63■□□□□ 0.09
LETM1-203ENST00000505551 ANO2Q9NQ90 1003 aa15.63■□□□□ 0.09
LETM1-203ENST00000505551 MON2Q7Z3U7 1717 aa15.63■□□□□ 0.09
LETM1-203ENST00000505551 KIF2AO00139 706 aaPredicted RBP15.63■□□□□ 0.09
LETM1-203ENST00000505551 EPB41L2O43491 1005 aaKnown RBP15.63■□□□□ 0.09
LETM1-203ENST00000505551 ZNF853P0CG23 659 aa15.63■□□□□ 0.09
LETM1-203ENST00000505551 DIP2AQ14689 1571 aa15.62■□□□□ 0.09
LETM1-203ENST00000505551 APBB1O00213 710 aa15.62■□□□□ 0.09
LETM1-203ENST00000505551 BANK1Q8NDB2 785 aa15.62■□□□□ 0.09
LETM1-203ENST00000505551 ELP1O95163 1332 aa15.62■□□□□ 0.09
LETM1-203ENST00000505551 SALL3Q9BXA9 1300 aa15.62■□□□□ 0.09
LETM1-203ENST00000505551 TRIM66O15016 1216 aa15.62■□□□□ 0.09
LETM1-203ENST00000505551 CHMLP26374 656 aa15.62■□□□□ 0.09
LETM1-203ENST00000505551 ERCC6LQ2NKX8 1250 aa15.62■□□□□ 0.09
LETM1-203ENST00000505551 NBPF20Q3BBV1 942 aa15.62■□□□□ 0.09
LETM1-203ENST00000505551 RBM43Q6ZSC3 357 aaKnown RBP15.62■□□□□ 0.09
LETM1-203ENST00000505551 LCMT1Q9UIC8 334 aa15.61■□□□□ 0.09
LETM1-203ENST00000505551 LRRFIP2Q9Y608 721 aaKnown RBP15.61■□□□□ 0.09
LETM1-203ENST00000505551 CEP170BQ9Y4F5 1589 aaPredicted RBP15.61■□□□□ 0.09
LETM1-203ENST00000505551 AKAP12Q02952 1782 aa15.61■□□□□ 0.09
LETM1-203ENST00000505551 TTC21AQ8NDW8 1320 aa15.61■□□□□ 0.09
LETM1-203ENST00000505551 LMOD3Q0VAK6 560 aa15.61■□□□□ 0.09
LETM1-203ENST00000505551 C10orf67Q8IYJ2 551 aa15.61■□□□□ 0.09
LETM1-203ENST00000505551 CCAR2Q8N163 923 aaKnown RBP15.61■□□□□ 0.09
LETM1-203ENST00000505551 TTC14Q96N46 770 aa15.61■□□□□ 0.09
LETM1-203ENST00000505551 BRMS1Q9HCU9 246 aa15.61■□□□□ 0.09
LETM1-203ENST00000505551 MTMR6Q9Y217 621 aa15.61■□□□□ 0.09
LETM1-203ENST00000505551 ZSCAN26Q16670 478 aa15.6■□□□□ 0.09
LETM1-203ENST00000505551 NECTIN2Q92692 538 aa15.6■□□□□ 0.09
LETM1-203ENST00000505551 SMARCE1Q969G3 411 aa15.6■□□□□ 0.09
LETM1-203ENST00000505551 KIAA0232Q92628 1395 aa15.6■□□□□ 0.09
LETM1-203ENST00000505551 HSPA4P34932 840 aa15.6■□□□□ 0.09
LETM1-203ENST00000505551 CCDC93Q567U6 631 aa15.6■□□□□ 0.09
LETM1-203ENST00000505551 SKILP12757 684 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 ST5P78524 1137 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 CCZ1BP86790 482 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 CCZ1P86791 482 aaPredicted RBP15.59■□□□□ 0.09
LETM1-203ENST00000505551 SARM1Q6SZW1 724 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 CCDC191Q8NCU4 936 aa15.59■□□□□ 0.09
LETM1-203ENST00000505551 CWC15Q9P013 229 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms