RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 NAT10Q9H0A0 1025 aaKnown RBP9.38□□□□□ -0.91
PROM1-206ENST00000505450 ARGLU1Q9NWB6 273 aaPredicted RBP9.38□□□□□ -0.91
PROM1-206ENST00000505450 MTMR6Q9Y217 621 aa9.38□□□□□ -0.91
PROM1-206ENST00000505450 PAXBP1Q9Y5B6 917 aa9.38□□□□□ -0.91
PROM1-206ENST00000505450 NPATQ14207 1427 aa9.38□□□□□ -0.91
PROM1-206ENST00000505450 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
PROM1-206ENST00000505450 VGLL3A8MV65 326 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 CCT2P78371 535 aaKnown RBP9.37□□□□□ -0.91
PROM1-206ENST00000505450 BICDL1Q6ZP65 573 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 PAXIP1Q6ZW49 1069 aaPredicted RBP9.37□□□□□ -0.91
PROM1-206ENST00000505450 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 TMX1Q9H3N1 280 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 CFAP45Q9UL16 551 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 PTCH1Q13635 1447 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 YTHDC2Q9H6S0 1430 aaKnown RBP9.37□□□□□ -0.91
PROM1-206ENST00000505450 RAD50Q92878 1312 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 PTCD1O75127 700 aaKnown RBP9.37□□□□□ -0.91
PROM1-206ENST00000505450 ZFYVE9O95405 1425 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 GTF2F1P35269 517 aaKnown RBP eCLIP9.37□□□□□ -0.91
PROM1-206ENST00000505450 STK38Q15208 465 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 ZNF710Q8N1W2 664 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 DNAAF4Q8WXU2 420 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 ERCC4Q92889 916 aaPredicted RBP9.37□□□□□ -0.91
PROM1-206ENST00000505450 FEZ1Q99689 392 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 CHMP4AQ9BY43 222 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 AFF2P51816 1311 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 SOS1Q07889 1333 aaPredicted RBP9.37□□□□□ -0.91
PROM1-206ENST00000505450 CPLX1O14810 134 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 ZSCAN20P17040 1043 aaPredicted RBP9.37□□□□□ -0.91
PROM1-206ENST00000505450 PTH1RQ03431 593 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 ADCK5Q3MIX3 580 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 LARP1Q6PKG0 1096 aaKnown RBP9.37□□□□□ -0.91
PROM1-206ENST00000505450 UBXN4Q92575 508 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 ATP7AQ04656 1500 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 A0A087WWV3 80 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 OSBPL3Q9H4L5 887 aa9.37□□□□□ -0.91
PROM1-206ENST00000505450 MYOM2P54296 1465 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 URI1O94763 535 aaPredicted RBP9.36□□□□□ -0.91
PROM1-206ENST00000505450 GPR162Q16538 588 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 ME3Q16798 604 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 SYNE3Q6ZMZ3 975 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 BRF1Q92994 677 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 IQGAP1P46940 1657 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 ABCC1P33527 1531 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 ZCCHC11Q5TAX3 1644 aaKnown RBP9.36□□□□□ -0.91
PROM1-206ENST00000505450 NBPF7P0C2Y1 421 aaPredicted RBP9.36□□□□□ -0.91
PROM1-206ENST00000505450 ZNF75DP51815 510 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 NEXNQ0ZGT2 675 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 CCAR1Q8IX12 1150 aaKnown RBP9.36□□□□□ -0.91
PROM1-206ENST00000505450 FSIP1Q8NA03 581 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 TFCP2L1Q9NZI6 479 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 MAP3K4Q9Y6R4 1608 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 CCDC69A6NI79 296 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 SFPQP23246 707 aaKnown RBP eCLIP9.36□□□□□ -0.91
PROM1-206ENST00000505450 SKIDA1Q1XH10 827 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 TMC6Q7Z403 805 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 GTF3C6Q969F1 213 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 USP44Q9H0E7 712 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 ACEP12821 1306 aa9.36□□□□□ -0.91
PROM1-206ENST00000505450 HIP1O00291 1037 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 ELF2Q15723 593 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 CREB3L3Q68CJ9 461 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 FAM227BQ96M60 508 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 TMEM2Q9UHN6 1383 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 UTP14CQ5TAP6 766 aaKnown RBP9.35□□□□□ -0.91
PROM1-206ENST00000505450 ZSCAN25Q6NSZ9 544 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 ERC1Q8IUD2 1116 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 ZNF215Q9UL58 517 aaPredicted RBP9.35□□□□□ -0.91
PROM1-206ENST00000505450 SERPINC1P01008 464 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 GRM1Q13255 1194 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 NMIQ13287 307 aaPredicted RBP9.35□□□□□ -0.91
PROM1-206ENST00000505450 SNW1Q13573 536 aaKnown RBP9.35□□□□□ -0.91
PROM1-206ENST00000505450 VPS53Q5VIR6 699 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
PROM1-206ENST00000505450 IL25Q9H293 177 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 RGS12O14924 1447 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 ABCA6Q8N139 1617 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 GPS2Q13227 327 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 TAF3Q5VWG9 929 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 AOPEPQ8N6M6 819 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 EVI5LQ96CN4 794 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 ZNF396Q96N95 335 aaPredicted RBP9.35□□□□□ -0.91
PROM1-206ENST00000505450 ANO10Q9NW15 660 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 CHPF2Q9P2E5 772 aa9.35□□□□□ -0.91
PROM1-206ENST00000505450 PIK3R4Q99570 1358 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 TTLL5Q6EMB2 1281 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 CACTINQ8WUQ7 758 aaKnown RBP9.34□□□□□ -0.91
PROM1-206ENST00000505450 NOL10Q9BSC4 688 aaKnown RBP9.34□□□□□ -0.91
PROM1-206ENST00000505450 TTC21BQ7Z4L5 1316 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 VIRMAQ69YN4 1812 aaKnown RBP9.34□□□□□ -0.91
PROM1-206ENST00000505450 FAM135BQ49AJ0 1406 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 JAK2O60674 1132 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 NR1I2O75469 434 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 DDX58O95786 925 aaKnown RBP9.34□□□□□ -0.91
PROM1-206ENST00000505450 MYL6BP14649 208 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 TMCO3Q6UWJ1 677 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 TRIM37O94972 964 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 POLD1P28340 1107 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 RAB11FIP4Q86YS3 637 aa9.34□□□□□ -0.91
PROM1-206ENST00000505450 KCNH5Q8NCM2 988 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms