RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
LMNA-220ENST00000504687 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
LMNA-220ENST00000504687 C16orf71Q8IYS4 520 aaPredicted RBP16.39■□□□□ 0.21
LMNA-220ENST00000504687 TAF1LQ8IZX4 1826 aa16.39■□□□□ 0.21
LMNA-220ENST00000504687 MX1P20591 662 aa16.38■□□□□ 0.21
LMNA-220ENST00000504687 CRKLP46109 303 aaKnown RBP16.38■□□□□ 0.21
LMNA-220ENST00000504687 FOXO4P98177 505 aa16.38■□□□□ 0.21
LMNA-220ENST00000504687 EPHA10Q5JZY3 1008 aa16.38■□□□□ 0.21
LMNA-220ENST00000504687 UPF2Q9HAU5 1272 aaKnown RBP16.38■□□□□ 0.21
LMNA-220ENST00000504687 MYH3P11055 1940 aa16.37■□□□□ 0.21
LMNA-220ENST00000504687 CDC45O75419 566 aa16.37■□□□□ 0.21
LMNA-220ENST00000504687 ZBTB38Q8NAP3 1195 aaPredicted RBP16.37■□□□□ 0.21
LMNA-220ENST00000504687 OTUD7AQ8TE49 926 aaPredicted RBP16.37■□□□□ 0.21
LMNA-220ENST00000504687 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
LMNA-220ENST00000504687 TTC41PQ6P2S7 1318 aa16.37■□□□□ 0.21
LMNA-220ENST00000504687 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
LMNA-220ENST00000504687 LAMB2P55268 1798 aa16.36■□□□□ 0.21
LMNA-220ENST00000504687 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
LMNA-220ENST00000504687 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
LMNA-220ENST00000504687 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
LMNA-220ENST00000504687 ZNF34Q8IZ26 560 aa16.36■□□□□ 0.21
LMNA-220ENST00000504687 AK7Q96M32 723 aa16.36■□□□□ 0.21
LMNA-220ENST00000504687 SEC24BO95487 1268 aa16.35■□□□□ 0.21
LMNA-220ENST00000504687 HMGB2P26583 209 aaKnown RBP16.35■□□□□ 0.21
LMNA-220ENST00000504687 PTPN12Q05209 780 aaKnown RBP16.35■□□□□ 0.21
LMNA-220ENST00000504687 G3BP1Q13283 466 aaKnown RBP eCLIP16.35■□□□□ 0.219e-9■■■□□ 15.8
LMNA-220ENST00000504687 NLRP10Q86W26 655 aa16.35■□□□□ 0.21
LMNA-220ENST00000504687 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
LMNA-220ENST00000504687 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
LMNA-220ENST00000504687 TBC1D32Q96NH3 1257 aa16.35■□□□□ 0.21
LMNA-220ENST00000504687 IPO9Q96P70 1041 aaKnown RBP16.35■□□□□ 0.21
LMNA-220ENST00000504687 CSF1RP07333 972 aa16.34■□□□□ 0.21
LMNA-220ENST00000504687 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
LMNA-220ENST00000504687 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
LMNA-220ENST00000504687 A0A0G2JS52 829 aa16.33■□□□□ 0.2
LMNA-220ENST00000504687 APBB1O00213 710 aa16.33■□□□□ 0.2
LMNA-220ENST00000504687 SASH1O94885 1247 aa16.33■□□□□ 0.2
LMNA-220ENST00000504687 SDSP20132 328 aa16.33■□□□□ 0.2
LMNA-220ENST00000504687 MYT1Q01538 1121 aa16.33■□□□□ 0.2
LMNA-220ENST00000504687 HLFQ16534 295 aa16.33■□□□□ 0.2
LMNA-220ENST00000504687 PARP10Q53GL7 1025 aa16.33■□□□□ 0.2
LMNA-220ENST00000504687 TBC1D9Q6ZT07 1266 aa16.33■□□□□ 0.2
LMNA-220ENST00000504687 CIAO1O76071 339 aa16.32■□□□□ 0.2
LMNA-220ENST00000504687 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
LMNA-220ENST00000504687 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
LMNA-220ENST00000504687 AK9Q5TCS8 1911 aa16.32■□□□□ 0.2
LMNA-220ENST00000504687 LMBR1LQ6UX01 489 aa16.32■□□□□ 0.2
LMNA-220ENST00000504687 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
LMNA-220ENST00000504687 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
LMNA-220ENST00000504687 RBM25P49756 843 aaKnown RBP16.31■□□□□ 0.2
LMNA-220ENST00000504687 FAM196AQ6ZSG2 479 aa16.31■□□□□ 0.2
LMNA-220ENST00000504687 LINC00116Q8NCU8 138 aa16.31■□□□□ 0.2
LMNA-220ENST00000504687 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
LMNA-220ENST00000504687 IL1RAPL2Q9NP60 686 aa16.31■□□□□ 0.2
LMNA-220ENST00000504687 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
LMNA-220ENST00000504687 ERC2O15083 957 aa16.3■□□□□ 0.2
LMNA-220ENST00000504687 EPB41L2O43491 1005 aaKnown RBP16.3■□□□□ 0.2
LMNA-220ENST00000504687 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
LMNA-220ENST00000504687 GLRX3O76003 335 aaKnown RBP16.3■□□□□ 0.2
LMNA-220ENST00000504687 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
LMNA-220ENST00000504687 CASC1Q6TDU7 716 aa16.3■□□□□ 0.2
LMNA-220ENST00000504687 GPATCH3Q96I76 525 aa16.3■□□□□ 0.2
LMNA-220ENST00000504687 ZNF652Q9Y2D9 606 aa16.3■□□□□ 0.2
LMNA-220ENST00000504687 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
LMNA-220ENST00000504687 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
LMNA-220ENST00000504687 DDX60Q8IY21 1712 aaKnown RBP16.29■□□□□ 0.2
LMNA-220ENST00000504687 IL15P40933 162 aaPredicted RBP16.29■□□□□ 0.2
LMNA-220ENST00000504687 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
LMNA-220ENST00000504687 LRP5O75197 1615 aa16.29■□□□□ 0.2
LMNA-220ENST00000504687 RTL9Q8NET4 1388 aa16.28■□□□□ 0.2
LMNA-220ENST00000504687 UBN2Q6ZU65 1347 aa16.28■□□□□ 0.2
LMNA-220ENST00000504687 KRT27Q7Z3Y8 459 aa16.28■□□□□ 0.2
LMNA-220ENST00000504687 TICAM2Q86XR7 235 aa16.28■□□□□ 0.2
LMNA-220ENST00000504687 ECHDC1Q9NTX5 307 aa16.28■□□□□ 0.2
LMNA-220ENST00000504687 PDE8AO60658 829 aa16.27■□□□□ 0.2
LMNA-220ENST00000504687 IFIT2P09913 472 aaKnown RBP16.27■□□□□ 0.2
LMNA-220ENST00000504687 PTF1AQ7RTS3 328 aa16.27■□□□□ 0.2
LMNA-220ENST00000504687 JARID2Q92833 1246 aaPredicted RBP16.27■□□□□ 0.2
LMNA-220ENST00000504687 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
LMNA-220ENST00000504687 C22orf23Q9BZE7 217 aa16.27■□□□□ 0.2
LMNA-220ENST00000504687 C4AP0C0L4 1744 aa16.27■□□□□ 0.19
LMNA-220ENST00000504687 EYA2O00167 538 aa16.26■□□□□ 0.19
LMNA-220ENST00000504687 SLC27A3Q5K4L6 730 aa16.26■□□□□ 0.19
LMNA-220ENST00000504687 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
LMNA-220ENST00000504687 ATG9AQ7Z3C6 839 aa16.26■□□□□ 0.19
LMNA-220ENST00000504687 NUTM1Q86Y26 1132 aa16.26■□□□□ 0.19
LMNA-220ENST00000504687 FAM89AQ96GI7 184 aa16.26■□□□□ 0.19
LMNA-220ENST00000504687 CCNL1Q9UK58 526 aaPredicted RBP16.26■□□□□ 0.19
LMNA-220ENST00000504687 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
LMNA-220ENST00000504687 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
LMNA-220ENST00000504687 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
LMNA-220ENST00000504687 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
LMNA-220ENST00000504687 MFAP1P55081 439 aaKnown RBP16.25■□□□□ 0.19
LMNA-220ENST00000504687 CTSWP56202 376 aa16.25■□□□□ 0.19
LMNA-220ENST00000504687 CCDC57Q2TAC2 916 aa16.25■□□□□ 0.19
LMNA-220ENST00000504687 TNNI3KQ59H18 835 aa16.25■□□□□ 0.19
LMNA-220ENST00000504687 AACSQ86V21 672 aa16.25■□□□□ 0.19
LMNA-220ENST00000504687 TTLL11Q8NHH1 800 aa16.25■□□□□ 0.19
LMNA-220ENST00000504687 NARFQ9UHQ1 456 aa16.25■□□□□ 0.19
LMNA-220ENST00000504687 TRMT112Q9UI30 125 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms