RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 ERVV-1B6SEH8 477 aa12.61□□□□□ -0.39
CDK7-203ENST00000504147 CDC45O75419 566 aa12.61□□□□□ -0.39
CDK7-203ENST00000504147 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
CDK7-203ENST00000504147 FOXO4P98177 505 aa12.61□□□□□ -0.39
CDK7-203ENST00000504147 HLFQ16534 295 aa12.61□□□□□ -0.39
CDK7-203ENST00000504147 HSP90AB3PQ58FF7 597 aa12.61□□□□□ -0.39
CDK7-203ENST00000504147 DDRGK1Q96HY6 314 aa12.61□□□□□ -0.39
CDK7-203ENST00000504147 QTRT2Q9H974 415 aaKnown RBP12.61□□□□□ -0.39
CDK7-203ENST00000504147 ATRNO75882 1429 aa12.61□□□□□ -0.39
CDK7-203ENST00000504147 SDSP20132 328 aa12.6□□□□□ -0.39
CDK7-203ENST00000504147 RFX5P48382 616 aaPredicted RBP12.6□□□□□ -0.39
CDK7-203ENST00000504147 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
CDK7-203ENST00000504147 MFAP1P55081 439 aaKnown RBP12.6□□□□□ -0.39
CDK7-203ENST00000504147 LMBR1LQ6UX01 489 aa12.6□□□□□ -0.39
CDK7-203ENST00000504147 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
CDK7-203ENST00000504147 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
CDK7-203ENST00000504147 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
CDK7-203ENST00000504147 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
CDK7-203ENST00000504147 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
CDK7-203ENST00000504147 TBC1D2BQ9UPU7 963 aa12.6□□□□□ -0.39
CDK7-203ENST00000504147 AOX1Q06278 1338 aa12.6□□□□□ -0.39
CDK7-203ENST00000504147 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
CDK7-203ENST00000504147 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
CDK7-203ENST00000504147 PCCAP05165 728 aaPredicted RBP12.59□□□□□ -0.39
CDK7-203ENST00000504147 RTL5Q5HYW3 569 aaPredicted RBP12.59□□□□□ -0.39
CDK7-203ENST00000504147 CLASRPQ8N2M8 674 aaKnown RBP12.59□□□□□ -0.39
CDK7-203ENST00000504147 COPRSQ9NQ92 184 aa12.59□□□□□ -0.39
CDK7-203ENST00000504147 SASH1O94885 1247 aa12.58□□□□□ -0.4
CDK7-203ENST00000504147 TSHZ3Q63HK5 1081 aa12.58□□□□□ -0.4
CDK7-203ENST00000504147 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
CDK7-203ENST00000504147 NLRP10Q86W26 655 aa12.58□□□□□ -0.4
CDK7-203ENST00000504147 ZBTB38Q8NAP3 1195 aaPredicted RBP12.58□□□□□ -0.4
CDK7-203ENST00000504147 C22orf23Q9BZE7 217 aa12.58□□□□□ -0.4
CDK7-203ENST00000504147 GPTP24298 496 aa12.57□□□□□ -0.4
CDK7-203ENST00000504147 PTPN12Q05209 780 aaKnown RBP12.57□□□□□ -0.4
CDK7-203ENST00000504147 FAM182BQ5T319 152 aa12.57□□□□□ -0.4
CDK7-203ENST00000504147 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
CDK7-203ENST00000504147 KLHDC4Q8TBB5 520 aa12.57□□□□□ -0.4
CDK7-203ENST00000504147 SIL1Q9H173 461 aa12.57□□□□□ -0.4
CDK7-203ENST00000504147 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.57□□□□□ -0.4
CDK7-203ENST00000504147 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
CDK7-203ENST00000504147 IFIT2P09913 472 aaKnown RBP12.56□□□□□ -0.4
CDK7-203ENST00000504147 ZNF34Q8IZ26 560 aa12.56□□□□□ -0.4
CDK7-203ENST00000504147 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
CDK7-203ENST00000504147 FAM89AQ96GI7 184 aa12.56□□□□□ -0.4
CDK7-203ENST00000504147 PLA2G12BQ9BX93 195 aa12.56□□□□□ -0.4
CDK7-203ENST00000504147 CHMP3Q9Y3E7 222 aa12.56□□□□□ -0.4
CDK7-203ENST00000504147 THSD7AQ9UPZ6 1657 aa12.56□□□□□ -0.4
CDK7-203ENST00000504147 USP42Q9H9J4 1324 aaKnown RBP12.56□□□□□ -0.4
CDK7-203ENST00000504147 CAMTA2O94983 1202 aa12.55□□□□□ -0.4
CDK7-203ENST00000504147 AACSQ86V21 672 aa12.55□□□□□ -0.4
CDK7-203ENST00000504147 GPATCH3Q96I76 525 aa12.55□□□□□ -0.4
CDK7-203ENST00000504147 TTC41PQ6P2S7 1318 aa12.55□□□□□ -0.4
CDK7-203ENST00000504147 TJP1Q07157 1748 aa12.54□□□□□ -0.4
CDK7-203ENST00000504147 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
CDK7-203ENST00000504147 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
CDK7-203ENST00000504147 RC3H1Q5TC82 1133 aaKnown RBP12.54□□□□□ -0.4
CDK7-203ENST00000504147 PI4K2BQ8TCG2 481 aa12.54□□□□□ -0.4
CDK7-203ENST00000504147 RILPL2Q969X0 211 aa12.54□□□□□ -0.4
CDK7-203ENST00000504147 EAF2Q96CJ1 260 aaPredicted RBP12.54□□□□□ -0.4
CDK7-203ENST00000504147 ECHDC1Q9NTX5 307 aa12.54□□□□□ -0.4
CDK7-203ENST00000504147 TRMT112Q9UI30 125 aaKnown RBP12.54□□□□□ -0.4
CDK7-203ENST00000504147 CDHR2Q9BYE9 1310 aa12.54□□□□□ -0.4
CDK7-203ENST00000504147 ERC2O15083 957 aa12.53□□□□□ -0.4
CDK7-203ENST00000504147 GLRX3O76003 335 aaKnown RBP12.53□□□□□ -0.4
CDK7-203ENST00000504147 CSF1RP07333 972 aa12.53□□□□□ -0.4
CDK7-203ENST00000504147 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
CDK7-203ENST00000504147 RBM25P49756 843 aaKnown RBP12.53□□□□□ -0.4
CDK7-203ENST00000504147 KCNQ4P56696 695 aa12.53□□□□□ -0.4
CDK7-203ENST00000504147 TFCP2Q12800 502 aa12.53□□□□□ -0.4
CDK7-203ENST00000504147 CCDC8Q9H0W5 538 aaPredicted RBP12.53□□□□□ -0.4
CDK7-203ENST00000504147 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.53□□□□□ -0.4
CDK7-203ENST00000504147 CNTNAP4Q9C0A0 1308 aa12.53□□□□□ -0.4
CDK7-203ENST00000504147 IRS4O14654 1257 aaPredicted RBP12.52□□□□□ -0.41
CDK7-203ENST00000504147 IL15P40933 162 aaPredicted RBP12.52□□□□□ -0.41
CDK7-203ENST00000504147 CCDC57Q2TAC2 916 aa12.52□□□□□ -0.41
CDK7-203ENST00000504147 ATG9AQ7Z3C6 839 aa12.52□□□□□ -0.41
CDK7-203ENST00000504147 SYNE4Q8N205 404 aa12.52□□□□□ -0.41
CDK7-203ENST00000504147 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
CDK7-203ENST00000504147 DAXXQ9UER7 740 aaPredicted RBP12.52□□□□□ -0.41
CDK7-203ENST00000504147 CCNL1Q9UK58 526 aaPredicted RBP12.52□□□□□ -0.41
CDK7-203ENST00000504147 EYA2O00167 538 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 RPS6KA4O75676 772 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 CIAO1O76071 339 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 MAP4K4O95819 1239 aaPredicted RBP12.51□□□□□ -0.41
CDK7-203ENST00000504147 CHMLP26374 656 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 PARP10Q53GL7 1025 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 TNNI3KQ59H18 835 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 FAM196AQ6ZSG2 479 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 KRT27Q7Z3Y8 459 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 ZNF594Q96JF6 807 aaPredicted RBP12.51□□□□□ -0.41
CDK7-203ENST00000504147 UTP14AQ9BVJ6 771 aaKnown RBP12.51□□□□□ -0.41
CDK7-203ENST00000504147 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 FPGT-TNNI3KV9GXZ4 949 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 UBN2Q6ZU65 1347 aa12.51□□□□□ -0.41
CDK7-203ENST00000504147 PDE8AO60658 829 aa12.5□□□□□ -0.41
CDK7-203ENST00000504147 IFIT5Q13325 482 aaKnown RBP12.5□□□□□ -0.41
CDK7-203ENST00000504147 BECN1Q14457 450 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms