RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 ST5P78524 1137 aa9.5□□□□□ -0.89
RFC1-206ENST00000503784 FKBP4Q02790 459 aaKnown RBP eCLIP9.5□□□□□ -0.89
RFC1-206ENST00000503784 AMOTQ4VCS5 1084 aa9.5□□□□□ -0.89
RFC1-206ENST00000503784 CST9Q5W186 159 aa9.5□□□□□ -0.89
RFC1-206ENST00000503784 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
RFC1-206ENST00000503784 TLL2Q9Y6L7 1015 aa9.5□□□□□ -0.89
RFC1-206ENST00000503784 DICER1Q9UPY3 1922 aaKnown RBP9.5□□□□□ -0.89
RFC1-206ENST00000503784 ANKRD31Q8N7Z5 1873 aa9.49□□□□□ -0.89
RFC1-206ENST00000503784 PDE4DIPQ5VU43 2346 aa9.49□□□□□ -0.89
RFC1-206ENST00000503784 LMOD1P29536 600 aaPredicted RBP9.49□□□□□ -0.89
RFC1-206ENST00000503784 MAP2K2P36507 400 aa9.49□□□□□ -0.89
RFC1-206ENST00000503784 CIAPIN1Q6FI81 312 aa9.49□□□□□ -0.89
RFC1-206ENST00000503784 MASTLQ96GX5 879 aa9.49□□□□□ -0.89
RFC1-206ENST00000503784 TBC1D2BQ9UPU7 963 aa9.49□□□□□ -0.89
RFC1-206ENST00000503784 SLX4Q8IY92 1834 aa9.48□□□□□ -0.89
RFC1-206ENST00000503784 CELF2O95319 508 aaKnown RBP9.48□□□□□ -0.89
RFC1-206ENST00000503784 IARSP41252 1262 aaKnown RBP9.48□□□□□ -0.89
RFC1-206ENST00000503784 EPS15P42566 896 aa9.48□□□□□ -0.89
RFC1-206ENST00000503784 BRPF1P55201 1214 aaPredicted RBP9.48□□□□□ -0.89
RFC1-206ENST00000503784 MIER1Q8N108 512 aa9.48□□□□□ -0.89
RFC1-206ENST00000503784 GPC2Q8N158 579 aa9.48□□□□□ -0.89
RFC1-206ENST00000503784 TMEM121BQ9BXQ6 578 aaPredicted RBP9.48□□□□□ -0.89
RFC1-206ENST00000503784 ZNF408Q9H9D4 720 aa9.48□□□□□ -0.89
RFC1-206ENST00000503784 SLC52A2Q9HAB3 445 aa9.48□□□□□ -0.89
RFC1-206ENST00000503784 A0A087WZG4 1122 aa9.47□□□□□ -0.89
RFC1-206ENST00000503784 FZD9O00144 591 aa9.47□□□□□ -0.89
RFC1-206ENST00000503784 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
RFC1-206ENST00000503784 C7orf43Q8WVR3 580 aa9.47□□□□□ -0.89
RFC1-206ENST00000503784 SETDB2Q96T68 719 aa9.47□□□□□ -0.89
RFC1-206ENST00000503784 LGR6Q9HBX8 967 aa9.47□□□□□ -0.89
RFC1-206ENST00000503784 SCNN1DP51172 638 aa9.46□□□□□ -0.9
RFC1-206ENST00000503784 EIF5P55010 431 aaKnown RBP9.46□□□□□ -0.9
RFC1-206ENST00000503784 EIF6P56537 245 aaKnown RBP9.46□□□□□ -0.9
RFC1-206ENST00000503784 SULT6B1Q6IMI4 303 aa9.46□□□□□ -0.9
RFC1-206ENST00000503784 SAPCD2Q86UD0 394 aa9.46□□□□□ -0.9
RFC1-206ENST00000503784 SYNE4Q8N205 404 aa9.46□□□□□ -0.9
RFC1-206ENST00000503784 ZIC5Q96T25 663 aa9.46□□□□□ -0.9
RFC1-206ENST00000503784 SCN7AQ01118 1682 aa9.45□□□□□ -0.9
RFC1-206ENST00000503784 STARD3NLO95772 234 aa9.45□□□□□ -0.9
RFC1-206ENST00000503784 NPR1P16066 1061 aa9.45□□□□□ -0.9
RFC1-206ENST00000503784 PLCG2P16885 1265 aa9.45□□□□□ -0.9
RFC1-206ENST00000503784 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
RFC1-206ENST00000503784 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
RFC1-206ENST00000503784 RTKN2Q8IZC4 609 aa9.45□□□□□ -0.9
RFC1-206ENST00000503784 JDP2Q8WYK2 163 aa9.45□□□□□ -0.9
RFC1-206ENST00000503784 GLIS2Q9BZE0 524 aaPredicted RBP9.45□□□□□ -0.9
RFC1-206ENST00000503784 CACNA1SQ13698 1873 aa9.45□□□□□ -0.9
RFC1-206ENST00000503784 CASP8AP2Q9UKL3 1982 aa9.44□□□□□ -0.9
RFC1-206ENST00000503784 RNMTO43148 476 aaKnown RBP9.44□□□□□ -0.9
RFC1-206ENST00000503784 CAMTA2O94983 1202 aa9.44□□□□□ -0.9
RFC1-206ENST00000503784 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
RFC1-206ENST00000503784 AKAP4Q5JQC9 854 aa9.44□□□□□ -0.9
RFC1-206ENST00000503784 NPM2Q86SE8 214 aaKnown RBP9.44□□□□□ -0.9
RFC1-206ENST00000503784 NBPF5PQ86XG9 351 aaPredicted RBP9.44□□□□□ -0.9
RFC1-206ENST00000503784 MRC1P22897 1456 aa9.44□□□□□ -0.9
RFC1-206ENST00000503784 COL4A5P29400 1685 aa9.43□□□□□ -0.9
RFC1-206ENST00000503784 FAM177BA6PVY3 158 aa9.43□□□□□ -0.9
RFC1-206ENST00000503784 USP50Q70EL3 339 aaPredicted RBP9.43□□□□□ -0.9
RFC1-206ENST00000503784 TTC5Q8N0Z6 440 aa9.43□□□□□ -0.9
RFC1-206ENST00000503784 VSIG10Q8N0Z9 540 aa9.43□□□□□ -0.9
RFC1-206ENST00000503784 NBPF15Q8N660 670 aa9.43□□□□□ -0.9
RFC1-206ENST00000503784 TMEM106CQ9BVX2 250 aa9.43□□□□□ -0.9
RFC1-206ENST00000503784 PIP4K2AP48426 406 aaPredicted RBP9.42□□□□□ -0.9
RFC1-206ENST00000503784 NOGQ13253 232 aa9.42□□□□□ -0.9
RFC1-206ENST00000503784 SLC51AQ86UW1 340 aa9.42□□□□□ -0.9
RFC1-206ENST00000503784 LARGE2Q8N3Y3 721 aa9.42□□□□□ -0.9
RFC1-206ENST00000503784 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
RFC1-206ENST00000503784 A1BGP04217 495 aa9.41□□□□□ -0.9
RFC1-206ENST00000503784 HABP4Q5JVS0 413 aaKnown RBP9.41□□□□□ -0.9
RFC1-206ENST00000503784 DZIP3Q86Y13 1208 aaKnown RBP9.41□□□□□ -0.9
RFC1-206ENST00000503784 MARVELD3Q96A59 401 aa9.41□□□□□ -0.9
RFC1-206ENST00000503784 GCC1Q96CN9 775 aa9.41□□□□□ -0.9
RFC1-206ENST00000503784 ZNF496Q96IT1 587 aaPredicted RBP9.41□□□□□ -0.9
RFC1-206ENST00000503784 HHIPL1Q96JK4 782 aa9.41□□□□□ -0.9
RFC1-206ENST00000503784 SCN11AQ9UI33 1791 aa9.4□□□□□ -0.9
RFC1-206ENST00000503784 ARFGEF2Q9Y6D5 1785 aa9.4□□□□□ -0.9
RFC1-206ENST00000503784 SNPHO15079 494 aa9.4□□□□□ -0.9
RFC1-206ENST00000503784 TRPA1O75762 1119 aa9.4□□□□□ -0.9
RFC1-206ENST00000503784 IL6STP40189 918 aaPredicted RBP9.4□□□□□ -0.9
RFC1-206ENST00000503784 HUNKP57058 714 aa9.4□□□□□ -0.9
RFC1-206ENST00000503784 CTU1Q7Z7A3 348 aaKnown RBP9.4□□□□□ -0.9
RFC1-206ENST00000503784 NIM1KQ8IY84 436 aa9.4□□□□□ -0.9
RFC1-206ENST00000503784 PSMD1Q99460 953 aa9.4□□□□□ -0.9
RFC1-206ENST00000503784 ADARB2Q9NS39 739 aaKnown RBP9.4□□□□□ -0.9
RFC1-206ENST00000503784 HPS5Q9UPZ3 1129 aa9.4□□□□□ -0.9
RFC1-206ENST00000503784 BCORQ6W2J9 1755 aa9.4□□□□□ -0.91
RFC1-206ENST00000503784 HEG1Q9ULI3 1381 aa9.39□□□□□ -0.91
RFC1-206ENST00000503784 TCERG1O14776 1098 aaKnown RBP9.39□□□□□ -0.91
RFC1-206ENST00000503784 DLK2Q6UY11 383 aa9.39□□□□□ -0.91
RFC1-206ENST00000503784 GPRC5DQ9NZD1 345 aa9.39□□□□□ -0.91
RFC1-206ENST00000503784 SNED1Q8TER0 1413 aa9.39□□□□□ -0.91
RFC1-206ENST00000503784 PPIP5K2O43314 1243 aa9.38□□□□□ -0.91
RFC1-206ENST00000503784 HMOX1P09601 288 aa9.38□□□□□ -0.91
RFC1-206ENST00000503784 GMPSP49915 693 aaPredicted RBP9.38□□□□□ -0.91
RFC1-206ENST00000503784 NUBP1P53384 320 aa9.38□□□□□ -0.91
RFC1-206ENST00000503784 KIF23Q02241 960 aaPredicted RBP9.38□□□□□ -0.91
RFC1-206ENST00000503784 RNF186Q9NXI6 227 aa9.38□□□□□ -0.91
RFC1-206ENST00000503784 SAGE1Q9NXZ1 904 aa9.38□□□□□ -0.91
RFC1-206ENST00000503784 NIP7Q9Y221 180 aaKnown RBP eCLIP9.38□□□□□ -0.91
RFC1-206ENST00000503784 TRPM7Q96QT4 1865 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms