RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 CWC25Q9NXE8 425 aaPredicted RBP27.23■■□□□ 1.95
PCDH1-204ENST00000503492 LMBR1LQ6UX01 489 aa27.23■■□□□ 1.95
PCDH1-204ENST00000503492 SNX14Q9Y5W7 946 aa27.23■■□□□ 1.95
PCDH1-204ENST00000503492 TJP1Q07157 1748 aa27.22■■□□□ 1.95
PCDH1-204ENST00000503492 PIGBQ92521 554 aa27.22■■□□□ 1.95
PCDH1-204ENST00000503492 BOLA2Q9H3K6 86 aa27.22■■□□□ 1.95
PCDH1-204ENST00000503492 TFCP2Q12800 502 aa27.22■■□□□ 1.95
PCDH1-204ENST00000503492 ASAP1Q9ULH1 1129 aa27.22■■□□□ 1.95
PCDH1-204ENST00000503492 COL14A1Q05707 1796 aaKnown RBP27.22■■□□□ 1.95
PCDH1-204ENST00000503492 CUL4AQ13619 759 aa27.21■■□□□ 1.95
PCDH1-204ENST00000503492 ROBO1Q9Y6N7 1651 aa27.21■■□□□ 1.95
PCDH1-204ENST00000503492 DISP2A7MBM2 1401 aa27.21■■□□□ 1.95
PCDH1-204ENST00000503492 BAG4O95429 457 aaKnown RBP27.21■■□□□ 1.95
PCDH1-204ENST00000503492 RASEFQ8IZ41 740 aa27.21■■□□□ 1.95
PCDH1-204ENST00000503492 TNNI3KQ59H18 835 aa27.2■■□□□ 1.95
PCDH1-204ENST00000503492 NOL8Q76FK4 1167 aaKnown RBP27.2■■□□□ 1.95
PCDH1-204ENST00000503492 FPGT-TNNI3KV9GXZ4 949 aa27.2■■□□□ 1.95
PCDH1-204ENST00000503492 PTH1RQ03431 593 aa27.2■■□□□ 1.94
PCDH1-204ENST00000503492 CCDC191Q8NCU4 936 aa27.19■■□□□ 1.94
PCDH1-204ENST00000503492 DBNLQ9UJU6 430 aaKnown RBP27.19■■□□□ 1.94
PCDH1-204ENST00000503492 ATG3Q9NT62 314 aa27.18■■□□□ 1.94
PCDH1-204ENST00000503492 DNAJC10Q8IXB1 793 aa27.17■■□□□ 1.94
PCDH1-204ENST00000503492 FAM227BQ96M60 508 aa27.17■■□□□ 1.94
PCDH1-204ENST00000503492 ZDHHC9Q9Y397 364 aa27.17■■□□□ 1.94
PCDH1-204ENST00000503492 ITGB4P16144 1822 aa27.17■■□□□ 1.94
PCDH1-204ENST00000503492 HIP1O00291 1037 aa27.17■■□□□ 1.94
PCDH1-204ENST00000503492 PTMSP20962 102 aa27.17■■□□□ 1.94
PCDH1-204ENST00000503492 NMIQ13287 307 aaPredicted RBP27.17■■□□□ 1.94
PCDH1-204ENST00000503492 IL27Q8NEV9 243 aa27.16■■□□□ 1.94
PCDH1-204ENST00000503492 CHMP3Q9Y3E7 222 aa27.16■■□□□ 1.94
PCDH1-204ENST00000503492 COL16A1Q07092 1604 aaPredicted RBP27.16■■□□□ 1.94
PCDH1-204ENST00000503492 VSIG10Q8N0Z9 540 aa27.16■■□□□ 1.94
PCDH1-204ENST00000503492 AHDC1Q5TGY3 1603 aaPredicted RBP27.16■■□□□ 1.94
PCDH1-204ENST00000503492 ATP5JP18859 108 aa27.15■■□□□ 1.94
PCDH1-204ENST00000503492 INTS4Q96HW7 963 aaKnown RBP27.15■■□□□ 1.94
PCDH1-204ENST00000503492 TTC14Q96N46 770 aa27.15■■□□□ 1.94
PCDH1-204ENST00000503492 FSD1Q9BTV5 496 aa27.15■■□□□ 1.94
PCDH1-204ENST00000503492 COL22A1Q8NFW1 1626 aaPredicted RBP27.15■■□□□ 1.94
PCDH1-204ENST00000503492 ISCA1Q9BUE6 129 aa27.14■■□□□ 1.94
PCDH1-204ENST00000503492 TEX13AQ9BXU3 409 aaPredicted RBP27.14■■□□□ 1.94
PCDH1-204ENST00000503492 CCDC171Q6TFL3 1326 aa27.14■■□□□ 1.94
PCDH1-204ENST00000503492 SKOR2Q2VWA4 1001 aaPredicted RBP27.14■■□□□ 1.93
PCDH1-204ENST00000503492 SNRKQ9NRH2 765 aa27.14■■□□□ 1.93
PCDH1-204ENST00000503492 ZNF330Q9Y3S2 320 aaPredicted RBP27.14■■□□□ 1.93
PCDH1-204ENST00000503492 GOLGA6L22H0YM25 854 aa27.13■■□□□ 1.93
PCDH1-204ENST00000503492 ATG9AQ7Z3C6 839 aa27.13■■□□□ 1.93
PCDH1-204ENST00000503492 KCNB2Q92953 911 aa27.13■■□□□ 1.93
PCDH1-204ENST00000503492 EDC3Q96F86 508 aaKnown RBP27.13■■□□□ 1.93
PCDH1-204ENST00000503492 DBNDD2Q9BQY9 259 aa27.13■■□□□ 1.93
PCDH1-204ENST00000503492 A0A0D9SFI3 127 aa27.12■■□□□ 1.93
PCDH1-204ENST00000503492 TCIRG1Q13488 830 aa27.12■■□□□ 1.93
PCDH1-204ENST00000503492 BRPF3Q9ULD4 1205 aa27.12■■□□□ 1.93
PCDH1-204ENST00000503492 FSD2A1L4K1 749 aa27.12■■□□□ 1.93
PCDH1-204ENST00000503492 PRPF40BQ6NWY9 871 aaKnown RBP27.12■■□□□ 1.93
PCDH1-204ENST00000503492 PLCH1Q4KWH8 1693 aa27.11■■□□□ 1.93
PCDH1-204ENST00000503492 NECTIN1Q15223 517 aa27.11■■□□□ 1.93
PCDH1-204ENST00000503492 BCL9O00512 1426 aa27.11■■□□□ 1.93
PCDH1-204ENST00000503492 MCTP1Q6DN14 999 aa27.1■■□□□ 1.93
PCDH1-204ENST00000503492 STARD3NLO95772 234 aa27.09■■□□□ 1.93
PCDH1-204ENST00000503492 MAP4K1Q92918 833 aa27.09■■□□□ 1.93
PCDH1-204ENST00000503492 RBM8AQ9Y5S9 174 aaKnown RBP27.09■■□□□ 1.93
PCDH1-204ENST00000503492 AK2P54819 239 aa27.09■■□□□ 1.93
PCDH1-204ENST00000503492 L1TD1Q5T7N2 865 aaKnown RBP27.09■■□□□ 1.93
PCDH1-204ENST00000503492 EXOC5O00471 708 aa27.08■■□□□ 1.93
PCDH1-204ENST00000503492 CPA1P15085 419 aa27.08■■□□□ 1.93
PCDH1-204ENST00000503492 CASTP20810 708 aaKnown RBP27.08■■□□□ 1.93
PCDH1-204ENST00000503492 ADCK5Q3MIX3 580 aa27.08■■□□□ 1.93
PCDH1-204ENST00000503492 SLC4A9Q96Q91 983 aa27.08■■□□□ 1.93
PCDH1-204ENST00000503492 MED23Q9ULK4 1368 aa27.08■■□□□ 1.93
PCDH1-204ENST00000503492 LRP6O75581 1613 aa27.08■■□□□ 1.93
PCDH1-204ENST00000503492 GOLGA6L3A6NEY3 463 aa27.08■■□□□ 1.93
PCDH1-204ENST00000503492 NDUFB9Q9Y6M9 179 aa27.08■■□□□ 1.93
PCDH1-204ENST00000503492 TRIM28Q13263 835 aaKnown RBP27.07■■□□□ 1.92
PCDH1-204ENST00000503492 KIF6Q6ZMV9 814 aa27.07■■□□□ 1.92
PCDH1-204ENST00000503492 ZNF594Q96JF6 807 aaPredicted RBP27.07■■□□□ 1.92
PCDH1-204ENST00000503492 RUFY3Q7L099 469 aa27.07■■□□□ 1.92
PCDH1-204ENST00000503492 IL15P40933 162 aaPredicted RBP27.06■■□□□ 1.92
PCDH1-204ENST00000503492 LRRC24Q50LG9 513 aa27.06■■□□□ 1.92
PCDH1-204ENST00000503492 JAKMIP1Q96N16 626 aaKnown RBP27.06■■□□□ 1.92
PCDH1-204ENST00000503492 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.06■■□□□ 1.92
PCDH1-204ENST00000503492 CREB3L3Q68CJ9 461 aa27.06■■□□□ 1.92
PCDH1-204ENST00000503492 HAUS7Q99871 368 aa27.06■■□□□ 1.92
PCDH1-204ENST00000503492 TM6SF1Q9BZW5 370 aa27.06■■□□□ 1.92
PCDH1-204ENST00000503492 WNK3Q9BYP7 1800 aa27.05■■□□□ 1.92
PCDH1-204ENST00000503492 KAT6BQ8WYB5 2073 aa27.05■■□□□ 1.92
PCDH1-204ENST00000503492 EYA2O00167 538 aa27.05■■□□□ 1.92
PCDH1-204ENST00000503492 BRD1O95696 1058 aa27.05■■□□□ 1.92
PCDH1-204ENST00000503492 ZNF589Q86UQ0 364 aaPredicted RBP27.05■■□□□ 1.92
PCDH1-204ENST00000503492 GPR108Q9NPR9 543 aa27.05■■□□□ 1.92
PCDH1-204ENST00000503492 ARXQ96QS3 562 aa27.05■■□□□ 1.92
PCDH1-204ENST00000503492 DNAJC2Q99543 621 aaKnown RBP27.05■■□□□ 1.92
PCDH1-204ENST00000503492 ZSWIM6Q9HCJ5 1215 aa27.05■■□□□ 1.92
PCDH1-204ENST00000503492 LMBRD1Q9NUN5 540 aa27.05■■□□□ 1.92
PCDH1-204ENST00000503492 FOXD4L5Q5VV16 416 aaPredicted RBP27.04■■□□□ 1.92
PCDH1-204ENST00000503492 FOXD4L4Q8WXT5 416 aaPredicted RBP27.04■■□□□ 1.92
PCDH1-204ENST00000503492 LARP6Q9BRS8 491 aaKnown RBP27.04■■□□□ 1.92
PCDH1-204ENST00000503492 LIMCH1Q9UPQ0 1083 aa27.04■■□□□ 1.92
PCDH1-204ENST00000503492 MAP3K15Q6ZN16 1313 aa27.04■■□□□ 1.92
PCDH1-204ENST00000503492 CYP19A1P11511 503 aaPredicted RBP27.04■■□□□ 1.92
PCDH1-204ENST00000503492 KCNJ4P48050 445 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms