RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 USP42Q9H9J4 1324 aaKnown RBP19.11■□□□□ 0.65
MBD4-204ENST00000503197 RGL2O15211 777 aa19.11■□□□□ 0.65
MBD4-204ENST00000503197 CLEC4GQ6UXB4 293 aa19.11■□□□□ 0.65
MBD4-204ENST00000503197 RFC4P35249 363 aa19.1■□□□□ 0.65
MBD4-204ENST00000503197 JARID2Q92833 1246 aaPredicted RBP19.1■□□□□ 0.65
MBD4-204ENST00000503197 KAZALD1Q96I82 304 aa19.1■□□□□ 0.65
MBD4-204ENST00000503197 ANO8Q9HCE9 1232 aaPredicted RBP19.1■□□□□ 0.65
MBD4-204ENST00000503197 KDM2BQ8NHM5 1336 aa19.1■□□□□ 0.65
MBD4-204ENST00000503197 H7C1W4 665 aa19.1■□□□□ 0.65
MBD4-204ENST00000503197 CEP85Q6P2H3 762 aa19.1■□□□□ 0.65
MBD4-204ENST00000503197 TFCP2L1Q9NZI6 479 aa19.1■□□□□ 0.65
MBD4-204ENST00000503197 ZNF652Q9Y2D9 606 aa19.1■□□□□ 0.65
MBD4-204ENST00000503197 ZPR1O75312 459 aa19.09■□□□□ 0.65
MBD4-204ENST00000503197 UBE3BQ7Z3V4 1068 aa19.09■□□□□ 0.65
MBD4-204ENST00000503197 ANKRD44Q8N8A2 993 aa19.09■□□□□ 0.65
MBD4-204ENST00000503197 SUCLG2Q96I99 432 aa19.09■□□□□ 0.65
MBD4-204ENST00000503197 HDAC1Q13547 482 aaPredicted RBP19.08■□□□□ 0.64
MBD4-204ENST00000503197 RPAP2Q8IXW5 612 aaPredicted RBP19.07■□□□□ 0.64
MBD4-204ENST00000503197 NIP7Q9Y221 180 aaKnown RBP eCLIP19.07■□□□□ 0.64
MBD4-204ENST00000503197 RTL5Q5HYW3 569 aaPredicted RBP19.07■□□□□ 0.64
MBD4-204ENST00000503197 TBC1D9BQ66K14 1250 aa19.07■□□□□ 0.64
MBD4-204ENST00000503197 PCCAP05165 728 aaPredicted RBP19.06■□□□□ 0.64
MBD4-204ENST00000503197 SUSD4Q5VX71 490 aa19.06■□□□□ 0.64
MBD4-204ENST00000503197 COL23A1Q86Y22 540 aaPredicted RBP19.06■□□□□ 0.64
MBD4-204ENST00000503197 UPF1Q92900 1129 aaKnown RBP eCLIP19.06■□□□□ 0.64
MBD4-204ENST00000503197 EPHA10Q5JZY3 1008 aa19.05■□□□□ 0.64
MBD4-204ENST00000503197 SYNE4Q8N205 404 aa19.05■□□□□ 0.64
MBD4-204ENST00000503197 ZBTB38Q8NAP3 1195 aaPredicted RBP19.05■□□□□ 0.64
MBD4-204ENST00000503197 FAM89AQ96GI7 184 aa19.05■□□□□ 0.64
MBD4-204ENST00000503197 RWDD1Q9H446 243 aaPredicted RBP19.05■□□□□ 0.64
MBD4-204ENST00000503197 COL24A1Q17RW2 1714 aa19.05■□□□□ 0.64
MBD4-204ENST00000503197 PNPLA7Q6ZV29 1317 aa19.05■□□□□ 0.64
MBD4-204ENST00000503197 PNMA6EA0A0J9YXQ4 647 aa19.05■□□□□ 0.64
MBD4-204ENST00000503197 GYS1P13807 737 aa19.05■□□□□ 0.64
MBD4-204ENST00000503197 SLC15A2Q16348 729 aa19.05■□□□□ 0.64
MBD4-204ENST00000503197 BICC1Q9H694 974 aaKnown RBP19.05■□□□□ 0.64
MBD4-204ENST00000503197 QSER1Q2KHR3 1735 aa19.04■□□□□ 0.64
MBD4-204ENST00000503197 PARP10Q53GL7 1025 aa19.04■□□□□ 0.64
MBD4-204ENST00000503197 ATP8B2P98198 1209 aa19.04■□□□□ 0.64
MBD4-204ENST00000503197 CENPQQ7L2Z9 268 aaPredicted RBP19.04■□□□□ 0.64
MBD4-204ENST00000503197 TRMT112Q9UI30 125 aaKnown RBP19.04■□□□□ 0.64
MBD4-204ENST00000503197 HDAC5Q9UQL6 1122 aa19.04■□□□□ 0.64
MBD4-204ENST00000503197 NTSR2O95665 410 aa19.03■□□□□ 0.64
MBD4-204ENST00000503197 MTX1Q13505 466 aa19.03■□□□□ 0.64
MBD4-204ENST00000503197 BICDL1Q6ZP65 573 aa19.03■□□□□ 0.64
MBD4-204ENST00000503197 FOXO4P98177 505 aa19.02■□□□□ 0.64
MBD4-204ENST00000503197 PPP1R42Q7Z4L9 355 aa19.02■□□□□ 0.64
MBD4-204ENST00000503197 FLAD1Q8NFF5 587 aa19.02■□□□□ 0.64
MBD4-204ENST00000503197 STK32BQ9NY57 414 aa19.02■□□□□ 0.64
MBD4-204ENST00000503197 CDHR2Q9BYE9 1310 aa19.02■□□□□ 0.64
MBD4-204ENST00000503197 FAM177BA6PVY3 158 aa19.02■□□□□ 0.63
MBD4-204ENST00000503197 UTP14AQ9BVJ6 771 aaKnown RBP19.02■□□□□ 0.63
MBD4-204ENST00000503197 RABL6Q3YEC7 729 aaPredicted RBP19.01■□□□□ 0.63
MBD4-204ENST00000503197 SSH3Q8TE77 659 aa19.01■□□□□ 0.63
MBD4-204ENST00000503197 SETDB2Q96T68 719 aa19.01■□□□□ 0.63
MBD4-204ENST00000503197 POLA2Q14181 598 aa19.01■□□□□ 0.63
MBD4-204ENST00000503197 NFIXQ14938 502 aa19.01■□□□□ 0.63
MBD4-204ENST00000503197 SRGAP3O43295 1099 aa19■□□□□ 0.63
MBD4-204ENST00000503197 SMC5Q8IY18 1101 aa19■□□□□ 0.63
MBD4-204ENST00000503197 PLA2G12BQ9BX93 195 aa19■□□□□ 0.63
MBD4-204ENST00000503197 DDX60Q8IY21 1712 aaKnown RBP19■□□□□ 0.63
MBD4-204ENST00000503197 SH3TC1Q8TE82 1336 aa19■□□□□ 0.63
MBD4-204ENST00000503197 IRS4O14654 1257 aaPredicted RBP18.99■□□□□ 0.63
MBD4-204ENST00000503197 HMMRO75330 724 aa18.99■□□□□ 0.63
MBD4-204ENST00000503197 TM4SF1P30408 202 aa18.99■□□□□ 0.63
MBD4-204ENST00000503197 NUTM1Q86Y26 1132 aa18.99■□□□□ 0.63
MBD4-204ENST00000503197 DCTPP1Q9H773 170 aa18.99■□□□□ 0.63
MBD4-204ENST00000503197 LAMB2P55268 1798 aa18.98■□□□□ 0.63
MBD4-204ENST00000503197 MSH5O43196 834 aa18.98■□□□□ 0.63
MBD4-204ENST00000503197 LMBR1LQ6UX01 489 aa18.98■□□□□ 0.63
MBD4-204ENST00000503197 CARMIL3Q8ND23 1372 aa18.98■□□□□ 0.63
MBD4-204ENST00000503197 MYH3P11055 1940 aa18.97■□□□□ 0.63
MBD4-204ENST00000503197 HCLS1P14317 486 aaPredicted RBP18.96■□□□□ 0.63
MBD4-204ENST00000503197 ERFEQ4G0M1 354 aa18.96■□□□□ 0.63
MBD4-204ENST00000503197 PDGFDQ9GZP0 370 aaPredicted RBP18.96■□□□□ 0.63
MBD4-204ENST00000503197 CSF1RP07333 972 aa18.96■□□□□ 0.63
MBD4-204ENST00000503197 DDR1Q08345 913 aa18.96■□□□□ 0.63
MBD4-204ENST00000503197 NBPF5PQ86XG9 351 aaPredicted RBP18.96■□□□□ 0.63
MBD4-204ENST00000503197 GCC1Q96CN9 775 aa18.96■□□□□ 0.63
MBD4-204ENST00000503197 ABCC12Q96J65 1359 aa18.95■□□□□ 0.62
MBD4-204ENST00000503197 RFX5P48382 616 aaPredicted RBP18.95■□□□□ 0.62
MBD4-204ENST00000503197 NYXQ9GZU5 481 aa18.95■□□□□ 0.62
MBD4-204ENST00000503197 PDE8AO60658 829 aa18.94■□□□□ 0.62
MBD4-204ENST00000503197 CTSWP56202 376 aa18.94■□□□□ 0.62
MBD4-204ENST00000503197 NLGN1Q8N2Q7 840 aa18.94■□□□□ 0.62
MBD4-204ENST00000503197 TTLL11Q8NHH1 800 aa18.94■□□□□ 0.62
MBD4-204ENST00000503197 CASZ1Q86V15 1759 aa18.94■□□□□ 0.62
MBD4-204ENST00000503197 TPTE2Q6XPS3 522 aa18.94■□□□□ 0.62
MBD4-204ENST00000503197 SKAP1Q86WV1 359 aa18.94■□□□□ 0.62
MBD4-204ENST00000503197 EXOC6BQ9Y2D4 811 aa18.94■□□□□ 0.62
MBD4-204ENST00000503197 POLRMTO00411 1230 aaKnown RBP18.93■□□□□ 0.62
MBD4-204ENST00000503197 SLC10A5Q5PT55 438 aa18.93■□□□□ 0.62
MBD4-204ENST00000503197 PA2G4Q9UQ80 394 aaKnown RBP18.93■□□□□ 0.62
MBD4-204ENST00000503197 KLHDC4Q8TBB5 520 aa18.93■□□□□ 0.62
MBD4-204ENST00000503197 SERPINB2P05120 415 aa18.92■□□□□ 0.62
MBD4-204ENST00000503197 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
MBD4-204ENST00000503197 MSL1Q68DK7 614 aa18.92■□□□□ 0.62
MBD4-204ENST00000503197 C3orf67Q6ZVT6 689 aa18.92■□□□□ 0.62
MBD4-204ENST00000503197 CCDC24Q8N4L8 307 aa18.92■□□□□ 0.62
MBD4-204ENST00000503197 CCDC85AQ96PX6 553 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms