RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 COPRSQ9NQ92 184 aa27.01■■□□□ 1.91
PTPN13-205ENST00000502971 ZBTB1Q9Y2K1 713 aa27■■□□□ 1.91
PTPN13-205ENST00000502971 USP42Q9H9J4 1324 aaKnown RBP27■■□□□ 1.91
PTPN13-205ENST00000502971 TUBGCP6Q96RT7 1819 aa27■■□□□ 1.91
PTPN13-205ENST00000502971 LOC102724428A0A0B4J2F2 783 aa26.99■■□□□ 1.91
PTPN13-205ENST00000502971 SIK1P57059 783 aa26.99■■□□□ 1.91
PTPN13-205ENST00000502971 HSP90AB3PQ58FF7 597 aa26.99■■□□□ 1.91
PTPN13-205ENST00000502971 GIGYF2Q6Y7W6 1299 aaKnown RBP26.99■■□□□ 1.91
PTPN13-205ENST00000502971 ATP6V1AP38606 617 aa26.99■■□□□ 1.91
PTPN13-205ENST00000502971 RFX5P48382 616 aaPredicted RBP26.99■■□□□ 1.91
PTPN13-205ENST00000502971 TSHZ3Q63HK5 1081 aa26.99■■□□□ 1.91
PTPN13-205ENST00000502971 TTC41PQ6P2S7 1318 aa26.98■■□□□ 1.91
PTPN13-205ENST00000502971 PALLDQ8WX93 1383 aa26.98■■□□□ 1.91
PTPN13-205ENST00000502971 FOXO4P98177 505 aa26.98■■□□□ 1.91
PTPN13-205ENST00000502971 FAM196AQ6ZSG2 479 aa26.98■■□□□ 1.91
PTPN13-205ENST00000502971 ZNF831Q5JPB2 1677 aa26.97■■□□□ 1.91
PTPN13-205ENST00000502971 BECN1Q14457 450 aa26.97■■□□□ 1.91
PTPN13-205ENST00000502971 ERVV-1B6SEH8 477 aa26.96■■□□□ 1.91
PTPN13-205ENST00000502971 SASH1O94885 1247 aa26.96■■□□□ 1.91
PTPN13-205ENST00000502971 ILDR2Q71H61 639 aa26.96■■□□□ 1.91
PTPN13-205ENST00000502971 PI4K2BQ8TCG2 481 aa26.96■■□□□ 1.91
PTPN13-205ENST00000502971 CCDC87Q9NVE4 849 aa26.96■■□□□ 1.91
PTPN13-205ENST00000502971 BRWD3Q6RI45 1802 aa26.95■■□□□ 1.9
PTPN13-205ENST00000502971 PTPN12Q05209 780 aaKnown RBP26.95■■□□□ 1.9
PTPN13-205ENST00000502971 LMBR1LQ6UX01 489 aa26.95■■□□□ 1.9
PTPN13-205ENST00000502971 ARXQ96QS3 562 aa26.95■■□□□ 1.9
PTPN13-205ENST00000502971 KCNQ2O43526 872 aa26.94■■□□□ 1.9
PTPN13-205ENST00000502971 IFIT2P09913 472 aaKnown RBP26.94■■□□□ 1.9
PTPN13-205ENST00000502971 INTS5Q6P9B9 1019 aaKnown RBP26.94■■□□□ 1.9
PTPN13-205ENST00000502971 GPATCH3Q96I76 525 aa26.94■■□□□ 1.9
PTPN13-205ENST00000502971 RREB1Q92766 1687 aa26.94■■□□□ 1.9
PTPN13-205ENST00000502971 PCCAP05165 728 aaPredicted RBP26.93■■□□□ 1.9
PTPN13-205ENST00000502971 NHSQ6T4R5 1651 aa26.93■■□□□ 1.9
PTPN13-205ENST00000502971 TRIM6-TRIM34B2RNG4 842 aa26.93■■□□□ 1.9
PTPN13-205ENST00000502971 ERC2O15083 957 aa26.93■■□□□ 1.9
PTPN13-205ENST00000502971 EIF5P55010 431 aaKnown RBP26.93■■□□□ 1.9
PTPN13-205ENST00000502971 FAM182BQ5T319 152 aa26.93■■□□□ 1.9
PTPN13-205ENST00000502971 DZIP3Q86Y13 1208 aaKnown RBP26.93■■□□□ 1.9
PTPN13-205ENST00000502971 SIL1Q9H173 461 aa26.93■■□□□ 1.9
PTPN13-205ENST00000502971 GLRX3O76003 335 aaKnown RBP26.92■■□□□ 1.9
PTPN13-205ENST00000502971 CRKLP46109 303 aaKnown RBP26.92■■□□□ 1.9
PTPN13-205ENST00000502971 HLFQ16534 295 aa26.92■■□□□ 1.9
PTPN13-205ENST00000502971 KLHDC4Q8TBB5 520 aa26.92■■□□□ 1.9
PTPN13-205ENST00000502971 ITPK1Q13572 414 aa26.91■■□□□ 1.9
PTPN13-205ENST00000502971 AACSQ86V21 672 aa26.91■■□□□ 1.9
PTPN13-205ENST00000502971 ZBTB38Q8NAP3 1195 aaPredicted RBP26.91■■□□□ 1.9
PTPN13-205ENST00000502971 RILPL2Q969X0 211 aa26.91■■□□□ 1.9
PTPN13-205ENST00000502971 ECHDC1Q9NTX5 307 aa26.91■■□□□ 1.9
PTPN13-205ENST00000502971 PLA2G12BQ9BX93 195 aa26.9■■□□□ 1.9
PTPN13-205ENST00000502971 REC8O95072 547 aa26.9■■□□□ 1.9
PTPN13-205ENST00000502971 RTL5Q5HYW3 569 aaPredicted RBP26.9■■□□□ 1.9
PTPN13-205ENST00000502971 BCL11BQ9C0K0 894 aaPredicted RBP26.9■■□□□ 1.9
PTPN13-205ENST00000502971 ANKRD36CQ5JPF3 1778 aa26.9■■□□□ 1.9
PTPN13-205ENST00000502971 NLRP10Q86W26 655 aa26.89■■□□□ 1.9
PTPN13-205ENST00000502971 CDHR2Q9BYE9 1310 aa26.88■■□□□ 1.89
PTPN13-205ENST00000502971 SBF2Q86WG5 1849 aa26.88■■□□□ 1.89
PTPN13-205ENST00000502971 SLC4A3P48751 1232 aa26.88■■□□□ 1.89
PTPN13-205ENST00000502971 EAF2Q96CJ1 260 aaPredicted RBP26.88■■□□□ 1.89
PTPN13-205ENST00000502971 CHMP3Q9Y3E7 222 aa26.88■■□□□ 1.89
PTPN13-205ENST00000502971 CNTROBQ8N137 903 aa26.87■■□□□ 1.89
PTPN13-205ENST00000502971 USP26Q9BXU7 913 aa26.87■■□□□ 1.89
PTPN13-205ENST00000502971 COL5A3P25940 1745 aaPredicted RBP26.87■■□□□ 1.89
PTPN13-205ENST00000502971 CHMLP26374 656 aa26.87■■□□□ 1.89
PTPN13-205ENST00000502971 TBC1D2BQ9UPU7 963 aa26.87■■□□□ 1.89
PTPN13-205ENST00000502971 NUP98P52948 1817 aa26.86■■□□□ 1.89
PTPN13-205ENST00000502971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.85■■□□□ 1.89
PTPN13-205ENST00000502971 ZNF34Q8IZ26 560 aa26.85■■□□□ 1.89
PTPN13-205ENST00000502971 FAM89AQ96GI7 184 aa26.85■■□□□ 1.89
PTPN13-205ENST00000502971 ESYT1Q9BSJ8 1104 aa26.85■■□□□ 1.89
PTPN13-205ENST00000502971 BTAF1O14981 1849 aa26.84■■□□□ 1.89
PTPN13-205ENST00000502971 GPTP24298 496 aa26.84■■□□□ 1.89
PTPN13-205ENST00000502971 CSF1RP07333 972 aa26.83■■□□□ 1.89
PTPN13-205ENST00000502971 TFCP2Q12800 502 aa26.83■■□□□ 1.89
PTPN13-205ENST00000502971 ANP32EQ9BTT0 268 aa26.83■■□□□ 1.89
PTPN13-205ENST00000502971 TBC1D2Q9BYX2 928 aa26.83■■□□□ 1.89
PTPN13-205ENST00000502971 CCDC8Q9H0W5 538 aaPredicted RBP26.83■■□□□ 1.89
PTPN13-205ENST00000502971 CIAO1O76071 339 aa26.82■■□□□ 1.88
PTPN13-205ENST00000502971 TNNI3KQ59H18 835 aa26.82■■□□□ 1.88
PTPN13-205ENST00000502971 KIF2CQ99661 725 aa26.82■■□□□ 1.88
PTPN13-205ENST00000502971 FBXO3Q9UK99 471 aa26.82■■□□□ 1.88
PTPN13-205ENST00000502971 FPGT-TNNI3KV9GXZ4 949 aa26.82■■□□□ 1.88
PTPN13-205ENST00000502971 IL15P40933 162 aaPredicted RBP26.82■■□□□ 1.88
PTPN13-205ENST00000502971 CCDC57Q2TAC2 916 aa26.81■■□□□ 1.88
PTPN13-205ENST00000502971 AK9Q5TCS8 1911 aa26.81■■□□□ 1.88
PTPN13-205ENST00000502971 MYH14Q7Z406 1995 aaKnown RBP26.81■■□□□ 1.88
PTPN13-205ENST00000502971 EYA2O00167 538 aa26.8■■□□□ 1.88
PTPN13-205ENST00000502971 MAP4K4O95819 1239 aaPredicted RBP26.8■■□□□ 1.88
PTPN13-205ENST00000502971 PTF1AQ7RTS3 328 aa26.8■■□□□ 1.88
PTPN13-205ENST00000502971 ATG9AQ7Z3C6 839 aa26.8■■□□□ 1.88
PTPN13-205ENST00000502971 SNX21Q969T3 373 aa26.8■■□□□ 1.88
PTPN13-205ENST00000502971 GPR108Q9NPR9 543 aa26.8■■□□□ 1.88
PTPN13-205ENST00000502971 CAMTA2O94983 1202 aa26.79■■□□□ 1.88
PTPN13-205ENST00000502971 TRMT112Q9UI30 125 aaKnown RBP26.79■■□□□ 1.88
PTPN13-205ENST00000502971 CNTNAP4Q9C0A0 1308 aa26.79■■□□□ 1.88
PTPN13-205ENST00000502971 EP400Q96L91 3159 aa26.79■■□□□ 1.88
PTPN13-205ENST00000502971 EPB41L2O43491 1005 aaKnown RBP26.79■■□□□ 1.88
PTPN13-205ENST00000502971 LINC00116Q8NCU8 138 aa26.79■■□□□ 1.88
PTPN13-205ENST00000502971 EVI5LQ96CN4 794 aa26.79■■□□□ 1.88
PTPN13-205ENST00000502971 TLR7Q9NYK1 1049 aaKnown RBP26.79■■□□□ 1.88
PTPN13-205ENST00000502971 UBN2Q6ZU65 1347 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms