RNA–Protein interactions for RNA: ENST00000502660.5

CSF1R-202, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 1,388 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-202ENST00000502660 LNPKQ9C0E8 428 aa20.34■□□□□ 0.85
CSF1R-202ENST00000502660 ZNF652Q9Y2D9 606 aa20.34■□□□□ 0.85
CSF1R-202ENST00000502660 NOP58Q9Y2X3 529 aaKnown RBP20.34■□□□□ 0.85
CSF1R-202ENST00000502660 RABL6Q3YEC7 729 aaPredicted RBP20.33■□□□□ 0.84
CSF1R-202ENST00000502660 ZBTB38Q8NAP3 1195 aaPredicted RBP20.33■□□□□ 0.84
CSF1R-202ENST00000502660 RTCBQ9Y3I0 505 aaKnown RBP20.33■□□□□ 0.84
CSF1R-202ENST00000502660 NUP98P52948 1817 aa20.32■□□□□ 0.84
CSF1R-202ENST00000502660 PLSCR1O15162 318 aa20.32■□□□□ 0.84
CSF1R-202ENST00000502660 SURF6O75683 361 aaKnown RBP20.32■□□□□ 0.84
CSF1R-202ENST00000502660 PDE4AP27815 886 aa20.32■□□□□ 0.84
CSF1R-202ENST00000502660 TAF1LQ8IZX4 1826 aa20.31■□□□□ 0.84
CSF1R-202ENST00000502660 PARP10Q53GL7 1025 aa20.31■□□□□ 0.84
CSF1R-202ENST00000502660 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
CSF1R-202ENST00000502660 EXOC6BQ9Y2D4 811 aa20.31■□□□□ 0.84
CSF1R-202ENST00000502660 ANKRD36CQ5JPF3 1778 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 CDHR2Q9BYE9 1310 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 GNPATO15228 680 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 GPTP24298 496 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 EPHA10Q5JZY3 1008 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 AK7Q96M32 723 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 PLA2G12BQ9BX93 195 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 LRRCC1Q9C099 1032 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 LRRC4BQ9NT99 713 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 NARFQ9UHQ1 456 aa20.3■□□□□ 0.84
CSF1R-202ENST00000502660 FOXO4P98177 505 aa20.29■□□□□ 0.84
CSF1R-202ENST00000502660 APBA3O96018 575 aa20.28■□□□□ 0.84
CSF1R-202ENST00000502660 ADRA2BP18089 450 aa20.28■□□□□ 0.84
CSF1R-202ENST00000502660 ERC1Q8IUD2 1116 aa20.28■□□□□ 0.84
CSF1R-202ENST00000502660 C4BP0C0L5 1744 aa20.27■□□□□ 0.84
CSF1R-202ENST00000502660 ZPR1O75312 459 aa20.27■□□□□ 0.84
CSF1R-202ENST00000502660 EN1Q05925 392 aaPredicted RBP20.27■□□□□ 0.84
CSF1R-202ENST00000502660 TXNRD1Q16881 649 aa20.27■□□□□ 0.84
CSF1R-202ENST00000502660 TRAPPC3LQ5T215 181 aa20.27■□□□□ 0.84
CSF1R-202ENST00000502660 LMBR1LQ6UX01 489 aa20.27■□□□□ 0.84
CSF1R-202ENST00000502660 KIF1BPQ96EK5 621 aa20.27■□□□□ 0.84
CSF1R-202ENST00000502660 TRMT112Q9UI30 125 aaKnown RBP20.27■□□□□ 0.84
CSF1R-202ENST00000502660 APBB1O00213 710 aa20.26■□□□□ 0.83
CSF1R-202ENST00000502660 HSP90B1P14625 803 aaKnown RBP20.26■□□□□ 0.83
CSF1R-202ENST00000502660 G3BP1Q13283 466 aaKnown RBP eCLIP20.26■□□□□ 0.83
CSF1R-202ENST00000502660 FAM89AQ96GI7 184 aa20.26■□□□□ 0.83
CSF1R-202ENST00000502660 RTL5Q5HYW3 569 aaPredicted RBP20.25■□□□□ 0.83
CSF1R-202ENST00000502660 ARHGEF1Q92888 912 aaKnown RBP20.25■□□□□ 0.83
CSF1R-202ENST00000502660 UTP14AQ9BVJ6 771 aaKnown RBP20.25■□□□□ 0.83
CSF1R-202ENST00000502660 COPRSQ9NQ92 184 aa20.25■□□□□ 0.83
CSF1R-202ENST00000502660 TSHZ2Q9NRE2 1034 aa20.25■□□□□ 0.83
CSF1R-202ENST00000502660 NIP7Q9Y221 180 aaKnown RBP eCLIP20.25■□□□□ 0.83
CSF1R-202ENST00000502660 UBN2Q6ZU65 1347 aa20.25■□□□□ 0.83
CSF1R-202ENST00000502660 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
CSF1R-202ENST00000502660 RFX5P48382 616 aaPredicted RBP20.24■□□□□ 0.83
CSF1R-202ENST00000502660 OS9Q13438 667 aaPredicted RBP20.24■□□□□ 0.83
CSF1R-202ENST00000502660 FAM161AQ3B820 660 aa20.24■□□□□ 0.83
CSF1R-202ENST00000502660 SUSD4Q5VX71 490 aa20.24■□□□□ 0.83
CSF1R-202ENST00000502660 PROM2Q8N271 834 aa20.24■□□□□ 0.83
CSF1R-202ENST00000502660 RHPN1Q8TCX5 695 aa20.24■□□□□ 0.83
CSF1R-202ENST00000502660 BCORQ6W2J9 1755 aa20.24■□□□□ 0.83
CSF1R-202ENST00000502660 CSF1RP07333 972 aa20.23■□□□□ 0.83
CSF1R-202ENST00000502660 RFC4P35249 363 aa20.23■□□□□ 0.83
CSF1R-202ENST00000502660 PLEKHM2Q8IWE5 1019 aa20.23■□□□□ 0.83
CSF1R-202ENST00000502660 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
CSF1R-202ENST00000502660 PDE8AO60658 829 aa20.22■□□□□ 0.83
CSF1R-202ENST00000502660 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
CSF1R-202ENST00000502660 C16orf71Q8IYS4 520 aaPredicted RBP20.22■□□□□ 0.83
CSF1R-202ENST00000502660 BACH2Q9BYV9 841 aa20.22■□□□□ 0.83
CSF1R-202ENST00000502660 PA2G4Q9UQ80 394 aaKnown RBP20.22■□□□□ 0.83
CSF1R-202ENST00000502660 SH3TC1Q8TE82 1336 aa20.22■□□□□ 0.83
CSF1R-202ENST00000502660 SSFA2P28290 1259 aa20.21■□□□□ 0.83
CSF1R-202ENST00000502660 PTPN12Q05209 780 aaKnown RBP20.21■□□□□ 0.83
CSF1R-202ENST00000502660 EZH2Q15910 746 aaKnown RBP20.21■□□□□ 0.83
CSF1R-202ENST00000502660 CHMP3Q9Y3E7 222 aa20.21■□□□□ 0.83
CSF1R-202ENST00000502660 OSBPL3Q9H4L5 887 aa20.21■□□□□ 0.83
CSF1R-202ENST00000502660 BCL2L12Q9HB09 334 aa20.21■□□□□ 0.83
CSF1R-202ENST00000502660 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
CSF1R-202ENST00000502660 CCDC57Q2TAC2 916 aa20.2■□□□□ 0.82
CSF1R-202ENST00000502660 BMP2KLQ5H9B9 411 aa20.2■□□□□ 0.82
CSF1R-202ENST00000502660 SRP68Q9UHB9 627 aaKnown RBP20.2■□□□□ 0.82
CSF1R-202ENST00000502660 FBXO3Q9UK99 471 aa20.2■□□□□ 0.82
CSF1R-202ENST00000502660 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
CSF1R-202ENST00000502660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
CSF1R-202ENST00000502660 NTSR2O95665 410 aa20.19■□□□□ 0.82
CSF1R-202ENST00000502660 SMIM5Q71RC9 77 aa20.19■□□□□ 0.82
CSF1R-202ENST00000502660 SYNE4Q8N205 404 aa20.19■□□□□ 0.82
CSF1R-202ENST00000502660 CLASRPQ8N2M8 674 aaKnown RBP20.19■□□□□ 0.82
CSF1R-202ENST00000502660 TTLL11Q8NHH1 800 aa20.19■□□□□ 0.82
CSF1R-202ENST00000502660 SETDB2Q96T68 719 aa20.19■□□□□ 0.82
CSF1R-202ENST00000502660 NYXQ9GZU5 481 aa20.19■□□□□ 0.82
CSF1R-202ENST00000502660 PHF14O94880 888 aa20.18■□□□□ 0.82
CSF1R-202ENST00000502660 CTSWP56202 376 aa20.18■□□□□ 0.82
CSF1R-202ENST00000502660 TBC1D9BQ66K14 1250 aa20.18■□□□□ 0.82
CSF1R-202ENST00000502660 AMIGO3Q86WK7 504 aa20.18■□□□□ 0.82
CSF1R-202ENST00000502660 CAMKK2Q96RR4 588 aa20.18■□□□□ 0.82
CSF1R-202ENST00000502660 IL1RAPL2Q9NP60 686 aa20.18■□□□□ 0.82
CSF1R-202ENST00000502660 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
CSF1R-202ENST00000502660 RGPD3A6NKT7 1758 aaPredicted RBP20.18■□□□□ 0.82
CSF1R-202ENST00000502660 RGPD4Q7Z3J3 1758 aa20.18■□□□□ 0.82
CSF1R-202ENST00000502660 SASH1O94885 1247 aa20.17■□□□□ 0.82
CSF1R-202ENST00000502660 PDE1AP54750 535 aa20.17■□□□□ 0.82
CSF1R-202ENST00000502660 IFIT5Q13325 482 aaKnown RBP20.17■□□□□ 0.82
CSF1R-202ENST00000502660 SALL3Q9BXA9 1300 aa20.17■□□□□ 0.82
CSF1R-202ENST00000502660 PSDA5PKW4 1024 aaPredicted RBP20.16■□□□□ 0.82
CSF1R-202ENST00000502660 CIAO1O76071 339 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms