RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 COG3Q96JB2 828 aa13.1□□□□□ -0.31
AC055717.1-201ENST00000502221 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
AC055717.1-201ENST00000502221 KIF2AO00139 706 aaPredicted RBP13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 F13A1P00488 732 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 CHMLP26374 656 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 GTF2E1P29083 439 aaPredicted RBP13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 HSPA4P34932 840 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 PDE4CQ08493 712 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 C8orf58Q8NAV2 365 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 TSC1Q92574 1164 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 ZSCAN31Q96LW9 406 aaPredicted RBP13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 TIGD1Q96MW7 591 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 KCNF1Q9H3M0 494 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 TUBB4AP04350 444 aa13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 ZNF397Q8NF99 534 aaPredicted RBP13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 THRAP3Q9Y2W1 955 aaKnown RBP13.09□□□□□ -0.31
AC055717.1-201ENST00000502221 OVOS2A0A0J9YW53 1432 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 OVOS2Q6IE36 1432 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 SALL3Q9BXA9 1300 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 APBA3O96018 575 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 SLFN14P0C7P3 912 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 CDC25BP30305 580 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 DHX8Q14562 1220 aaKnown RBP13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 TERF2Q15554 542 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 TOM1L2Q6ZVM7 507 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 LRRCC1Q9C099 1032 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 ANO2Q9NQ90 1003 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 TMEM51Q9NW97 253 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 POLKQ9UBT6 870 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 PYCARDQ9ULZ3 195 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 ELP1O95163 1332 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 WDR17Q8IZU2 1322 aa13.08□□□□□ -0.32
AC055717.1-201ENST00000502221 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 KIF18AQ8NI77 898 aa13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 IPO4Q8TEX9 1081 aaKnown RBP13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 SH2B1Q9NRF2 756 aaPredicted RBP13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 SMC3Q9UQE7 1217 aa13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 TNNT1P13805 278 aa13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 IL13P35225 146 aa13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 CNPY2Q9Y2B0 182 aa13.07□□□□□ -0.32
AC055717.1-201ENST00000502221 GNAI2P04899 355 aa13.06□□□□□ -0.32
AC055717.1-201ENST00000502221 MAP3K11Q16584 847 aa13.06□□□□□ -0.32
AC055717.1-201ENST00000502221 C17orf53Q8N3J3 647 aaPredicted RBP13.06□□□□□ -0.32
AC055717.1-201ENST00000502221 KCNH5Q8NCM2 988 aa13.06□□□□□ -0.32
AC055717.1-201ENST00000502221 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
AC055717.1-201ENST00000502221 FAM53CQ9NYF3 392 aa13.06□□□□□ -0.32
AC055717.1-201ENST00000502221 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
AC055717.1-201ENST00000502221 SMARCA5O60264 1052 aaPredicted RBP13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 GNAI3P08754 354 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 CHAMP1Q96JM3 812 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 ABCC6O95255 1503 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 RGPD2P0DJD1 1756 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 OVOS2A0A0G2JMS6 1433 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 SYT1P21579 422 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 KCND1Q9NSA2 647 aa13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 DDX19AQ9NUU7 478 aaKnown RBP13.05□□□□□ -0.32
AC055717.1-201ENST00000502221 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
AC055717.1-201ENST00000502221 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
AC055717.1-201ENST00000502221 CHL1O00533 1208 aa13.04□□□□□ -0.32
AC055717.1-201ENST00000502221 PDCP20941 246 aa13.04□□□□□ -0.32
AC055717.1-201ENST00000502221 ERO1AQ96HE7 468 aa13.04□□□□□ -0.32
AC055717.1-201ENST00000502221 DDB1Q16531 1140 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 GIMAP6Q6P9H5 292 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 TTC14Q96N46 770 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 KRT85P78386 507 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 CEP135Q66GS9 1140 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 DRC7Q8IY82 874 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 TDRD7Q8NHU6 1098 aaKnown RBP13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 MEIS3Q99687 375 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 RAD50Q92878 1312 aa13.03□□□□□ -0.32
AC055717.1-201ENST00000502221 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.32
AC055717.1-201ENST00000502221 RAB11FIP3O75154 756 aa13.02□□□□□ -0.32
AC055717.1-201ENST00000502221 CSB-PGBD3P0DP91 1061 aa13.02□□□□□ -0.32
AC055717.1-201ENST00000502221 PTGS1P23219 599 aa13.02□□□□□ -0.32
AC055717.1-201ENST00000502221 BMS1Q14692 1282 aaKnown RBP13.02□□□□□ -0.32
AC055717.1-201ENST00000502221 ZSCAN25Q6NSZ9 544 aa13.02□□□□□ -0.32
AC055717.1-201ENST00000502221 THUMPD2Q9BTF0 503 aaKnown RBP13.02□□□□□ -0.32
AC055717.1-201ENST00000502221 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.32
AC055717.1-201ENST00000502221 TM6SF1Q9BZW5 370 aa13.02□□□□□ -0.32
AC055717.1-201ENST00000502221 SCAND2PQ9GZW5 306 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms