RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 FZD9O00144 591 aa12.25□□□□□ -0.45
CCDC171-209ENST00000498725 TRAF5O00463 557 aa12.25□□□□□ -0.45
CCDC171-209ENST00000498725 LMOD1P29536 600 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-209ENST00000498725 ALDH1B1P30837 517 aa12.25□□□□□ -0.45
CCDC171-209ENST00000498725 EIF6P56537 245 aaKnown RBP12.25□□□□□ -0.45
CCDC171-209ENST00000498725 MLLT1Q03111 559 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-209ENST00000498725 HLFQ16534 295 aa12.25□□□□□ -0.45
CCDC171-209ENST00000498725 SLC51AQ86UW1 340 aa12.25□□□□□ -0.45
CCDC171-209ENST00000498725 GPC2Q8N158 579 aa12.25□□□□□ -0.45
CCDC171-209ENST00000498725 PHACTR3Q96KR7 559 aa12.25□□□□□ -0.45
CCDC171-209ENST00000498725 THSD7BQ9C0I4 1608 aa12.25□□□□□ -0.45
CCDC171-209ENST00000498725 CASP8AP2Q9UKL3 1982 aa12.25□□□□□ -0.45
CCDC171-209ENST00000498725 AOC2O75106 756 aa12.24□□□□□ -0.45
CCDC171-209ENST00000498725 PRKAR2BP31323 418 aa12.24□□□□□ -0.45
CCDC171-209ENST00000498725 EPS15P42566 896 aa12.24□□□□□ -0.45
CCDC171-209ENST00000498725 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
CCDC171-209ENST00000498725 CLEC4GQ6UXB4 293 aa12.24□□□□□ -0.45
CCDC171-209ENST00000498725 MCM10Q7L590 875 aa12.24□□□□□ -0.45
CCDC171-209ENST00000498725 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
CCDC171-209ENST00000498725 GPR101Q96P66 508 aaPredicted RBP12.24□□□□□ -0.45
CCDC171-209ENST00000498725 LAMB4A4D0S4 1761 aa12.23□□□□□ -0.45
CCDC171-209ENST00000498725 CEMIPQ8WUJ3 1361 aa12.23□□□□□ -0.45
CCDC171-209ENST00000498725 NBPF26B4DH59 902 aa12.23□□□□□ -0.45
CCDC171-209ENST00000498725 SNRPA1P09661 255 aaKnown RBP12.23□□□□□ -0.45
CCDC171-209ENST00000498725 DCTN1Q14203 1278 aa12.23□□□□□ -0.45
CCDC171-209ENST00000498725 NBPF10Q6P3W6 841 aaKnown RBP12.23□□□□□ -0.45
CCDC171-209ENST00000498725 NBPF15Q8N660 670 aa12.23□□□□□ -0.45
CCDC171-209ENST00000498725 ABCC12Q96J65 1359 aa12.22□□□□□ -0.45
CCDC171-209ENST00000498725 KLRG2A4D1S0 409 aaPredicted RBP12.22□□□□□ -0.45
CCDC171-209ENST00000498725 ECE1P42892 770 aa12.22□□□□□ -0.45
CCDC171-209ENST00000498725 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
CCDC171-209ENST00000498725 RPGRQ92834 1020 aaKnown RBP12.22□□□□□ -0.45
CCDC171-209ENST00000498725 SCNN1DP51172 638 aa12.21□□□□□ -0.45
CCDC171-209ENST00000498725 CST9Q5W186 159 aa12.21□□□□□ -0.45
CCDC171-209ENST00000498725 RTF1Q92541 710 aaKnown RBP12.21□□□□□ -0.45
CCDC171-209ENST00000498725 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
CCDC171-209ENST00000498725 DLG5Q8TDM6 1919 aa12.2□□□□□ -0.46
CCDC171-209ENST00000498725 PER1O15534 1290 aaPredicted RBP12.2□□□□□ -0.46
CCDC171-209ENST00000498725 GPTP24298 496 aa12.2□□□□□ -0.46
CCDC171-209ENST00000498725 PSMD1Q99460 953 aa12.2□□□□□ -0.46
CCDC171-209ENST00000498725 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
CCDC171-209ENST00000498725 ZNF408Q9H9D4 720 aa12.2□□□□□ -0.46
CCDC171-209ENST00000498725 CLSPNQ9HAW4 1339 aa12.19□□□□□ -0.46
CCDC171-209ENST00000498725 NIM1KQ8IY84 436 aa12.19□□□□□ -0.46
CCDC171-209ENST00000498725 MCOLN1Q9GZU1 580 aa12.19□□□□□ -0.46
CCDC171-209ENST00000498725 NYXQ9GZU5 481 aa12.19□□□□□ -0.46
CCDC171-209ENST00000498725 RRP7AQ9Y3A4 280 aaKnown RBP12.19□□□□□ -0.46
CCDC171-209ENST00000498725 TLL2Q9Y6L7 1015 aa12.19□□□□□ -0.46
CCDC171-209ENST00000498725 SNED1Q8TER0 1413 aa12.19□□□□□ -0.46
CCDC171-209ENST00000498725 PPEF1O14829 653 aaPredicted RBP12.18□□□□□ -0.46
CCDC171-209ENST00000498725 PPIP5K2O43314 1243 aa12.18□□□□□ -0.46
CCDC171-209ENST00000498725 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
CCDC171-209ENST00000498725 MYL6BP14649 208 aa12.18□□□□□ -0.46
CCDC171-209ENST00000498725 AOC3Q16853 763 aa12.18□□□□□ -0.46
CCDC171-209ENST00000498725 USP50Q70EL3 339 aaPredicted RBP12.18□□□□□ -0.46
CCDC171-209ENST00000498725 ZBTB3Q9H5J0 574 aa12.18□□□□□ -0.46
CCDC171-209ENST00000498725 LAMB2P55268 1798 aa12.18□□□□□ -0.46
CCDC171-209ENST00000498725 TAF1P21675 1872 aa12.17□□□□□ -0.46
CCDC171-209ENST00000498725 U2AF1L5P0DN76 240 aaPredicted RBP12.17□□□□□ -0.46
CCDC171-209ENST00000498725 U2AF1Q01081 240 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC171-209ENST00000498725 DGKZQ13574 1117 aa12.17□□□□□ -0.46
CCDC171-209ENST00000498725 CRY2Q49AN0 593 aa12.17□□□□□ -0.46
CCDC171-209ENST00000498725 TTLL7Q6ZT98 887 aa12.17□□□□□ -0.46
CCDC171-209ENST00000498725 RBM17Q96I25 401 aaKnown RBP12.17□□□□□ -0.46
CCDC171-209ENST00000498725 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
CCDC171-209ENST00000498725 GLIS2Q9BZE0 524 aaPredicted RBP12.17□□□□□ -0.46
CCDC171-209ENST00000498725 KDM3BQ7LBC6 1761 aa12.17□□□□□ -0.46
CCDC171-209ENST00000498725 CC2D2BQ6DHV5 1058 aa12.16□□□□□ -0.46
CCDC171-209ENST00000498725 KIF6Q6ZMV9 814 aa12.16□□□□□ -0.46
CCDC171-209ENST00000498725 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
CCDC171-209ENST00000498725 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
CCDC171-209ENST00000498725 ADARB2Q9NS39 739 aaKnown RBP12.16□□□□□ -0.46
CCDC171-209ENST00000498725 MAP3K15Q6ZN16 1313 aa12.15□□□□□ -0.46
CCDC171-209ENST00000498725 UBN2Q6ZU65 1347 aa12.15□□□□□ -0.46
CCDC171-209ENST00000498725 MAP2K2P36507 400 aa12.15□□□□□ -0.46
CCDC171-209ENST00000498725 RGS19P49795 217 aa12.15□□□□□ -0.46
CCDC171-209ENST00000498725 GMPSP49915 693 aaPredicted RBP12.15□□□□□ -0.46
CCDC171-209ENST00000498725 SUSD4Q5VX71 490 aa12.15□□□□□ -0.46
CCDC171-209ENST00000498725 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.46
CCDC171-209ENST00000498725 GPRC5DQ9NZD1 345 aa12.15□□□□□ -0.46
CCDC171-209ENST00000498725 NUDCQ9Y266 331 aa12.15□□□□□ -0.46
CCDC171-209ENST00000498725 NPC1L1Q9UHC9 1359 aa12.15□□□□□ -0.46
CCDC171-209ENST00000498725 POLR2AP24928 1970 aaKnown RBP12.14□□□□□ -0.47
CCDC171-209ENST00000498725 HOXA10P31260 410 aaPredicted RBP12.14□□□□□ -0.47
CCDC171-209ENST00000498725 CXCL9Q07325 125 aa12.14□□□□□ -0.47
CCDC171-209ENST00000498725 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
CCDC171-209ENST00000498725 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
CCDC171-209ENST00000498725 DLK2Q6UY11 383 aa12.14□□□□□ -0.47
CCDC171-209ENST00000498725 SAPCD2Q86UD0 394 aa12.14□□□□□ -0.47
CCDC171-209ENST00000498725 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
CCDC171-209ENST00000498725 TMX4Q9H1E5 349 aaPredicted RBP12.14□□□□□ -0.47
CCDC171-209ENST00000498725 TNRC18O15417 2968 aaPredicted RBP12.14□□□□□ -0.47
CCDC171-209ENST00000498725 ERVV-1B6SEH8 477 aa12.13□□□□□ -0.47
CCDC171-209ENST00000498725 RAD17O75943 681 aa12.13□□□□□ -0.47
CCDC171-209ENST00000498725 CRAMP1Q96RY5 1269 aa12.13□□□□□ -0.47
CCDC171-209ENST00000498725 ZIC5Q96T25 663 aa12.13□□□□□ -0.47
CCDC171-209ENST00000498725 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
CCDC171-209ENST00000498725 RIC1Q4ADV7 1423 aa12.12□□□□□ -0.47
CCDC171-209ENST00000498725 AKAP11Q9UKA4 1901 aa12.12□□□□□ -0.47
CCDC171-209ENST00000498725 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms