RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
NUP50-219ENST00000497960 KDM2BQ8NHM5 1336 aa19.79■□□□□ 0.76
NUP50-219ENST00000497960 SLX4Q8IY92 1834 aa19.79■□□□□ 0.76
NUP50-219ENST00000497960 CCDC93Q567U6 631 aa19.79■□□□□ 0.76
NUP50-219ENST00000497960 SBF1O95248 1867 aa19.79■□□□□ 0.76
NUP50-219ENST00000497960 IL16Q14005 1332 aa19.78■□□□□ 0.76
NUP50-219ENST00000497960 RIC1Q4ADV7 1423 aa19.78■□□□□ 0.76
NUP50-219ENST00000497960 CCDC30Q5VVM6 783 aa19.78■□□□□ 0.76
NUP50-219ENST00000497960 NLRP10Q86W26 655 aa19.78■□□□□ 0.76
NUP50-219ENST00000497960 C7orf43Q8WVR3 580 aa19.78■□□□□ 0.76
NUP50-219ENST00000497960 TSR2Q969E8 191 aaKnown RBP19.78■□□□□ 0.76
NUP50-219ENST00000497960 NLRP3Q96P20 1036 aa19.78■□□□□ 0.76
NUP50-219ENST00000497960 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
NUP50-219ENST00000497960 LTBP3Q9NS15 1303 aa19.77■□□□□ 0.76
NUP50-219ENST00000497960 KIF3CO14782 793 aa19.77■□□□□ 0.76
NUP50-219ENST00000497960 PRELPP51888 382 aa19.77■□□□□ 0.76
NUP50-219ENST00000497960 GOLGA2Q08379 1002 aa19.77■□□□□ 0.76
NUP50-219ENST00000497960 SLC10A5Q5PT55 438 aa19.77■□□□□ 0.76
NUP50-219ENST00000497960 RBM17Q96I25 401 aaKnown RBP19.77■□□□□ 0.76
NUP50-219ENST00000497960 HOXA10P31260 410 aaPredicted RBP19.76■□□□□ 0.75
NUP50-219ENST00000497960 RTKN2Q8IZC4 609 aa19.76■□□□□ 0.75
NUP50-219ENST00000497960 NMRK2Q9NPI5 230 aa19.76■□□□□ 0.75
NUP50-219ENST00000497960 TRMT112Q9UI30 125 aaKnown RBP19.76■□□□□ 0.75
NUP50-219ENST00000497960 SH3TC1Q8TE82 1336 aa19.76■□□□□ 0.75
NUP50-219ENST00000497960 RIC3Q7Z5B4 369 aa19.75■□□□□ 0.75
NUP50-219ENST00000497960 WDR63Q8IWG1 891 aa19.75■□□□□ 0.75
NUP50-219ENST00000497960 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
NUP50-219ENST00000497960 CACNA1SQ13698 1873 aa19.75■□□□□ 0.75
NUP50-219ENST00000497960 ARFGEF2Q9Y6D5 1785 aa19.75■□□□□ 0.75
NUP50-219ENST00000497960 CRAMP1Q96RY5 1269 aa19.74■□□□□ 0.75
NUP50-219ENST00000497960 PHAXQ9H814 394 aaKnown RBP19.74■□□□□ 0.75
NUP50-219ENST00000497960 TNRC6CQ9HCJ0 1690 aaKnown RBP19.74■□□□□ 0.75
NUP50-219ENST00000497960 FER1L6Q2WGJ9 1857 aa19.73■□□□□ 0.75
NUP50-219ENST00000497960 ATP5J2-PTCD1G3V325 749 aa19.73■□□□□ 0.75
NUP50-219ENST00000497960 DDX58O95786 925 aaKnown RBP19.73■□□□□ 0.75
NUP50-219ENST00000497960 FKBP4Q02790 459 aaKnown RBP eCLIP19.73■□□□□ 0.75
NUP50-219ENST00000497960 CC2D2BQ6DHV5 1058 aa19.73■□□□□ 0.75
NUP50-219ENST00000497960 DPY19L2Q6NUT2 758 aa19.73■□□□□ 0.75
NUP50-219ENST00000497960 C16orf71Q8IYS4 520 aaPredicted RBP19.73■□□□□ 0.75
NUP50-219ENST00000497960 ISCA1Q9BUE6 129 aa19.73■□□□□ 0.75
NUP50-219ENST00000497960 STK31Q9BXU1 1019 aa19.73■□□□□ 0.75
NUP50-219ENST00000497960 GLTPD2A6NH11 291 aa19.72■□□□□ 0.75
NUP50-219ENST00000497960 HCLS1P14317 486 aaPredicted RBP19.72■□□□□ 0.75
NUP50-219ENST00000497960 TWISTNBQ3B726 338 aaPredicted RBP19.72■□□□□ 0.75
NUP50-219ENST00000497960 OLFM4Q6UX06 510 aa19.72■□□□□ 0.75
NUP50-219ENST00000497960 C3orf67Q6ZVT6 689 aa19.72■□□□□ 0.75
NUP50-219ENST00000497960 ANKRD36CQ5JPF3 1778 aa19.72■□□□□ 0.75
NUP50-219ENST00000497960 CCDC88AQ3V6T2 1871 aa19.71■□□□□ 0.75
NUP50-219ENST00000497960 TOMM70O94826 608 aa19.71■□□□□ 0.75
NUP50-219ENST00000497960 TRIM28Q13263 835 aaKnown RBP19.71■□□□□ 0.75
NUP50-219ENST00000497960 TMX4Q9H1E5 349 aaPredicted RBP19.71■□□□□ 0.75
NUP50-219ENST00000497960 RRAGCQ9HB90 399 aa19.71■□□□□ 0.75
NUP50-219ENST00000497960 PPEF1O14829 653 aaPredicted RBP19.7■□□□□ 0.74
NUP50-219ENST00000497960 GRIPAP1Q4V328 841 aa19.7■□□□□ 0.74
NUP50-219ENST00000497960 SYNE4Q8N205 404 aa19.7■□□□□ 0.74
NUP50-219ENST00000497960 ZNF428Q96B54 188 aa19.7■□□□□ 0.74
NUP50-219ENST00000497960 ZNF277Q9NRM2 450 aaPredicted RBP19.7■□□□□ 0.74
NUP50-219ENST00000497960 FANCIQ9NVI1 1328 aa19.7■□□□□ 0.74
NUP50-219ENST00000497960 TCERG1O14776 1098 aaKnown RBP19.68■□□□□ 0.74
NUP50-219ENST00000497960 DDX46Q7L014 1031 aaKnown RBP19.68■□□□□ 0.74
NUP50-219ENST00000497960 FAM89AQ96GI7 184 aa19.68■□□□□ 0.74
NUP50-219ENST00000497960 MYD88Q99836 296 aa19.68■□□□□ 0.74
NUP50-219ENST00000497960 VEGFAP15692 232 aaPredicted RBP19.67■□□□□ 0.74
NUP50-219ENST00000497960 PSMD1Q99460 953 aa19.67■□□□□ 0.74
NUP50-219ENST00000497960 MYH16Q9H6N6 1097 aa19.67■□□□□ 0.74
NUP50-219ENST00000497960 ABCC4O15439 1325 aa19.67■□□□□ 0.74
NUP50-219ENST00000497960 TIAM2Q8IVF5 1701 aa19.66■□□□□ 0.74
NUP50-219ENST00000497960 BBOX1O75936 387 aa19.66■□□□□ 0.74
NUP50-219ENST00000497960 SLC4A2P04920 1241 aa19.66■□□□□ 0.74
NUP50-219ENST00000497960 HSP90B1P14625 803 aaKnown RBP19.66■□□□□ 0.74
NUP50-219ENST00000497960 IARSP41252 1262 aaKnown RBP19.66■□□□□ 0.74
NUP50-219ENST00000497960 KSR2Q6VAB6 950 aa19.66■□□□□ 0.74
NUP50-219ENST00000497960 CCDC191Q8NCU4 936 aa19.66■□□□□ 0.74
NUP50-219ENST00000497960 RBM46Q8TBY0 533 aaKnown RBP19.66■□□□□ 0.74
NUP50-219ENST00000497960 METTL22Q9BUU2 404 aaPredicted RBP19.66■□□□□ 0.74
NUP50-219ENST00000497960 DICER1Q9UPY3 1922 aaKnown RBP19.66■□□□□ 0.74
NUP50-219ENST00000497960 IRS4O14654 1257 aaPredicted RBP19.65■□□□□ 0.74
NUP50-219ENST00000497960 EXOSC9Q06265 439 aaKnown RBP19.65■□□□□ 0.74
NUP50-219ENST00000497960 RTL5Q5HYW3 569 aaPredicted RBP19.65■□□□□ 0.74
NUP50-219ENST00000497960 ZBTB38Q8NAP3 1195 aaPredicted RBP19.65■□□□□ 0.74
NUP50-219ENST00000497960 MAP3K2Q9Y2U5 619 aa19.65■□□□□ 0.74
NUP50-219ENST00000497960 ATP6V0A2Q9Y487 856 aa19.65■□□□□ 0.74
NUP50-219ENST00000497960 PI4KAP2A4QPH2 592 aa19.64■□□□□ 0.73
NUP50-219ENST00000497960 HSPA6P17066 643 aa19.64■□□□□ 0.73
NUP50-219ENST00000497960 NEXNQ0ZGT2 675 aa19.64■□□□□ 0.73
NUP50-219ENST00000497960 GRAPQ13588 217 aa19.64■□□□□ 0.73
NUP50-219ENST00000497960 PI4KAP1Q8N8J0 262 aa19.64■□□□□ 0.73
NUP50-219ENST00000497960 GRAPLQ8TC17 118 aaPredicted RBP19.64■□□□□ 0.73
NUP50-219ENST00000497960 JDP2Q8WYK2 163 aa19.64■□□□□ 0.73
NUP50-219ENST00000497960 CWC25Q9NXE8 425 aaPredicted RBP19.64■□□□□ 0.73
NUP50-219ENST00000497960 VAMP4O75379 141 aa19.63■□□□□ 0.73
NUP50-219ENST00000497960 SF3B3Q15393 1217 aaKnown RBP19.63■□□□□ 0.73
NUP50-219ENST00000497960 SNED1Q8TER0 1413 aa19.62■□□□□ 0.73
NUP50-219ENST00000497960 DDNO94850 711 aaPredicted RBP19.62■□□□□ 0.73
NUP50-219ENST00000497960 PCCAP05165 728 aaPredicted RBP19.62■□□□□ 0.73
NUP50-219ENST00000497960 TMC4Q7Z404 712 aa19.62■□□□□ 0.73
NUP50-219ENST00000497960 SP8Q8IXZ3 490 aa19.62■□□□□ 0.73
NUP50-219ENST00000497960 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
NUP50-219ENST00000497960 FSTL1Q12841 308 aa19.61■□□□□ 0.73
NUP50-219ENST00000497960 FLIIQ13045 1269 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms