RNA–Protein interactions for RNA: ENST00000497355.5

FOXP1-215, Transcript of forkhead box P1, humanhuman

TSL 1 (best)

Gene FOXP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-215ENST00000497355 NECTIN1Q15223 517 aa9.24□□□□□ -0.93
FOXP1-215ENST00000497355 RUFY3Q7L099 469 aa9.24□□□□□ -0.93
FOXP1-215ENST00000497355 KLHDC4Q8TBB5 520 aa9.24□□□□□ -0.93
FOXP1-215ENST00000497355 SIL1Q9H173 461 aa9.24□□□□□ -0.93
FOXP1-215ENST00000497355 TLR7Q9NYK1 1049 aaKnown RBP9.24□□□□□ -0.93
FOXP1-215ENST00000497355 SHANK3Q9BYB0 1731 aa9.23□□□□□ -0.93
FOXP1-215ENST00000497355 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
FOXP1-215ENST00000497355 HIP1O00291 1037 aa9.23□□□□□ -0.93
FOXP1-215ENST00000497355 NMIQ13287 307 aaPredicted RBP9.23□□□□□ -0.93
FOXP1-215ENST00000497355 JARID2Q92833 1246 aaPredicted RBP9.23□□□□□ -0.93
FOXP1-215ENST00000497355 TM6SF1Q9BZW5 370 aa9.23□□□□□ -0.93
FOXP1-215ENST00000497355 ZSWIM6Q9HCJ5 1215 aa9.23□□□□□ -0.93
FOXP1-215ENST00000497355 COPRSQ9NQ92 184 aa9.23□□□□□ -0.93
FOXP1-215ENST00000497355 SNRKQ9NRH2 765 aa9.23□□□□□ -0.93
FOXP1-215ENST00000497355 RBM27Q9P2N5 1060 aaKnown RBP9.23□□□□□ -0.93
FOXP1-215ENST00000497355 NSFL1CQ9UNZ2 370 aaKnown RBP9.23□□□□□ -0.93
FOXP1-215ENST00000497355 LIMCH1Q9UPQ0 1083 aa9.23□□□□□ -0.93
FOXP1-215ENST00000497355 RPAP1Q9BWH6 1393 aaPredicted RBP9.23□□□□□ -0.93
FOXP1-215ENST00000497355 CPA1P15085 419 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 CASTP20810 708 aaKnown RBP9.22□□□□□ -0.93
FOXP1-215ENST00000497355 CASP7P55210 303 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
FOXP1-215ENST00000497355 ADCK5Q3MIX3 580 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 RABL6Q3YEC7 729 aaPredicted RBP9.22□□□□□ -0.93
FOXP1-215ENST00000497355 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
FOXP1-215ENST00000497355 UBE2Q2Q8WVN8 375 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 MAP4K1Q92918 833 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 FAM227BQ96M60 508 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
FOXP1-215ENST00000497355 BOLA2Q9H3K6 86 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 ABCA3Q99758 1704 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 CCDC171Q6TFL3 1326 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 WDR33Q9C0J8 1336 aaKnown RBP9.22□□□□□ -0.93
FOXP1-215ENST00000497355 TJP1Q07157 1748 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 VPS53Q5VIR6 699 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 BRINP3Q76B58 766 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 PLBD2Q8NHP8 589 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 JAKMIP1Q96N16 626 aaKnown RBP9.22□□□□□ -0.93
FOXP1-215ENST00000497355 PPP1R9BQ96SB3 815 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 TMEM63CQ9P1W3 806 aa9.22□□□□□ -0.93
FOXP1-215ENST00000497355 RBM8AQ9Y5S9 174 aaKnown RBP9.22□□□□□ -0.93
FOXP1-215ENST00000497355 WDR17Q8IZU2 1322 aa9.21□□□□□ -0.93
FOXP1-215ENST00000497355 STRCQ7RTU9 1775 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 A0A087WZG4 1122 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 NBPF26B4DH59 902 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 PTCD1O75127 700 aaKnown RBP9.21□□□□□ -0.94
FOXP1-215ENST00000497355 LARGE1O95461 756 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 MBD3O95983 291 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 NASPP49321 788 aaPredicted RBP9.21□□□□□ -0.94
FOXP1-215ENST00000497355 HSPA2P54652 639 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 C1QBPQ07021 282 aaKnown RBP9.21□□□□□ -0.94
FOXP1-215ENST00000497355 NBPF14Q5TI25 921 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 CREB3L3Q68CJ9 461 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.94
FOXP1-215ENST00000497355 UBE3BQ7Z3V4 1068 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 NBPF15Q8N660 670 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 ZCRB1Q8TBF4 217 aaKnown RBP9.21□□□□□ -0.94
FOXP1-215ENST00000497355 RBSNQ9H1K0 784 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 PDRG1Q9NUG6 133 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.21□□□□□ -0.94
FOXP1-215ENST00000497355 KCPQ6ZWJ8 1503 aa9.21□□□□□ -0.94
FOXP1-215ENST00000497355 A0A0D9SFI3 127 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 ERVV-2B6SEH9 535 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 H7C1W4 665 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 SLC27A2O14975 620 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 ATP5JP18859 108 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
FOXP1-215ENST00000497355 TFCP2Q12800 502 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
FOXP1-215ENST00000497355 TNNI3KQ59H18 835 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 LRSAM1Q6UWE0 723 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 ZSCAN31Q96LW9 406 aaPredicted RBP9.2□□□□□ -0.94
FOXP1-215ENST00000497355 CYP46A1Q9Y6A2 500 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 FPGT-TNNI3KV9GXZ4 949 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
FOXP1-215ENST00000497355 ZSCAN22P10073 491 aaPredicted RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 CLCN1P35523 988 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 FOXO4P98177 505 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 CCDC173Q0VFZ6 552 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 USP48Q86UV5 1035 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 FSD1Q9BTV5 496 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 DBNLQ9UJU6 430 aaKnown RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 SOS2Q07890 1332 aaPredicted RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 PCDH11XQ9BZA7 1347 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 PCDH11YQ9BZA8 1340 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 JCADQ9P266 1359 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 MED23Q9ULK4 1368 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 COL5A2P05997 1499 aaPredicted RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 GADD45BO75293 160 aaPredicted RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 ZKSCAN1P17029 563 aaPredicted RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 SYT1P21579 422 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 FOXD4L6Q3SYB3 417 aaPredicted RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 FOXD4L3Q6VB84 417 aaPredicted RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 TTLL7Q6ZT98 887 aa9.19□□□□□ -0.94
FOXP1-215ENST00000497355 DDX54Q8TDD1 881 aaKnown RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 EDC3Q96F86 508 aaKnown RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 ALDH8A1Q9H2A2 487 aaPredicted RBP9.19□□□□□ -0.94
FOXP1-215ENST00000497355 PRDM11Q9NQV5 511 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms