RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 GSK3AP49840 483 aa6.62□□□□□ -1.35
CMSS1-209ENST00000497345 SRSF11Q05519 484 aaKnown RBP6.62□□□□□ -1.35
CMSS1-209ENST00000497345 GAS6Q14393 721 aa6.62□□□□□ -1.35
CMSS1-209ENST00000497345 WDR44Q5JSH3 913 aa6.62□□□□□ -1.35
CMSS1-209ENST00000497345 TMEM132EQ6IEE7 984 aa6.62□□□□□ -1.35
CMSS1-209ENST00000497345 NBPF10Q6P3W6 841 aaKnown RBP6.62□□□□□ -1.35
CMSS1-209ENST00000497345 FOXR1Q6PIV2 292 aa6.62□□□□□ -1.35
CMSS1-209ENST00000497345 NBPF15Q8N660 670 aa6.62□□□□□ -1.35
CMSS1-209ENST00000497345 ZNF837Q96EG3 531 aaPredicted RBP6.62□□□□□ -1.35
CMSS1-209ENST00000497345 GAS2L1Q99501 681 aaPredicted RBP6.62□□□□□ -1.35
CMSS1-209ENST00000497345 MYO5BQ9ULV0 1848 aa6.62□□□□□ -1.35
CMSS1-209ENST00000497345 RALGAPBQ86X10 1494 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 ARHGAP31Q2M1Z3 1444 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 UHRF1BP1Q6BDS2 1440 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 TNRQ92752 1358 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 H7C1W4 665 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
CMSS1-209ENST00000497345 CENPCQ03188 943 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 IRF5Q13568 498 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 TSGA10IPQ3SY00 556 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 LYPD4Q6UWN0 246 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 PHTF2Q8N3S3 785 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 CNKSR1Q969H4 720 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 ESYT1Q9BSJ8 1104 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 RAB6BQ9NRW1 208 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 SLC52A1Q9NWF4 448 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 STK26Q9P289 416 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 FER1L4A9Z1Z3 1794 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 PIK3C2BO00750 1634 aa6.61□□□□□ -1.35
CMSS1-209ENST00000497345 GPR25O00155 361 aa6.6□□□□□ -1.35
CMSS1-209ENST00000497345 TMEM151AQ8N4L1 468 aa6.6□□□□□ -1.35
CMSS1-209ENST00000497345 TIMMDC1Q9NPL8 285 aa6.6□□□□□ -1.35
CMSS1-209ENST00000497345 TRAK1Q9UPV9 953 aa6.6□□□□□ -1.35
CMSS1-209ENST00000497345 RIMS1Q86UR5 1692 aaKnown RBP6.6□□□□□ -1.35
CMSS1-209ENST00000497345 TRPM1Q7Z4N2 1603 aa6.6□□□□□ -1.35
CMSS1-209ENST00000497345 ADGRB3O60242 1522 aa6.6□□□□□ -1.35
CMSS1-209ENST00000497345 WASHC2AQ641Q2 1341 aa6.59□□□□□ -1.35
CMSS1-209ENST00000497345 MADDQ8WXG6 1647 aa6.59□□□□□ -1.35
CMSS1-209ENST00000497345 RNF225M0QZC1 329 aaPredicted RBP6.59□□□□□ -1.35
CMSS1-209ENST00000497345 WASLO00401 505 aaPredicted RBP6.59□□□□□ -1.35
CMSS1-209ENST00000497345 IL2RAP01589 272 aa6.59□□□□□ -1.35
CMSS1-209ENST00000497345 RASSF7Q02833 373 aa6.59□□□□□ -1.35
CMSS1-209ENST00000497345 USP4Q13107 963 aa6.59□□□□□ -1.35
CMSS1-209ENST00000497345 SAFB2Q14151 953 aaKnown RBP eCLIP6.59□□□□□ -1.35
CMSS1-209ENST00000497345 TAS1R3Q7RTX0 852 aa6.59□□□□□ -1.35
CMSS1-209ENST00000497345 GTPBP3Q969Y2 492 aaKnown RBP6.59□□□□□ -1.35
CMSS1-209ENST00000497345 XAGE2Q96GT9 111 aa6.59□□□□□ -1.35
CMSS1-209ENST00000497345 MBIPQ9NS73 344 aa6.59□□□□□ -1.35
CMSS1-209ENST00000497345 RPGRIP1LQ68CZ1 1315 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 GDF11O95390 407 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 F11P03951 625 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 CELA2BP08218 269 aaPredicted RBP6.58□□□□□ -1.36
CMSS1-209ENST00000497345 MARSP56192 900 aaKnown RBP6.58□□□□□ -1.36
CMSS1-209ENST00000497345 SLFNL1Q499Z3 407 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 YTHDC1Q96MU7 727 aaKnown RBP6.58□□□□□ -1.36
CMSS1-209ENST00000497345 ZSCAN10Q96SZ4 725 aaPredicted RBP6.58□□□□□ -1.36
CMSS1-209ENST00000497345 GDPD2Q9HCC8 539 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 HRH3Q9Y5N1 445 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 PPLO60437 1756 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 C3P01024 1663 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 RIMS2Q9UQ26 1411 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 TMEM131LA2VDJ0 1609 aa6.58□□□□□ -1.36
CMSS1-209ENST00000497345 CCDC7Q96M83 1385 aa6.57□□□□□ -1.36
CMSS1-209ENST00000497345 SPATA31D1Q6ZQQ2 1576 aa6.57□□□□□ -1.36
CMSS1-209ENST00000497345 KIF7Q2M1P5 1343 aa6.57□□□□□ -1.36
CMSS1-209ENST00000497345 IFT172Q9UG01 1749 aa6.57□□□□□ -1.36
CMSS1-209ENST00000497345 MAP3K10Q02779 954 aa6.57□□□□□ -1.36
CMSS1-209ENST00000497345 VAC14Q08AM6 782 aa6.57□□□□□ -1.36
CMSS1-209ENST00000497345 KCTD17Q8N5Z5 321 aa6.57□□□□□ -1.36
CMSS1-209ENST00000497345 TRERF1Q96PN7 1200 aa6.57□□□□□ -1.36
CMSS1-209ENST00000497345 C14orf93Q9H972 538 aaKnown RBP6.57□□□□□ -1.36
CMSS1-209ENST00000497345 DOLKQ9UPQ8 538 aa6.57□□□□□ -1.36
CMSS1-209ENST00000497345 NEXMIFQ5QGS0 1516 aa6.56□□□□□ -1.36
CMSS1-209ENST00000497345 A2ML1A8K2U0 1454 aa6.56□□□□□ -1.36
CMSS1-209ENST00000497345 MYOM2P54296 1465 aa6.56□□□□□ -1.36
CMSS1-209ENST00000497345 PHKA2P46019 1235 aa6.56□□□□□ -1.36
CMSS1-209ENST00000497345 ESCO1Q5FWF5 840 aa6.56□□□□□ -1.36
CMSS1-209ENST00000497345 TXNDC2Q86VQ3 553 aa6.56□□□□□ -1.36
CMSS1-209ENST00000497345 RNF135Q8IUD6 432 aa6.56□□□□□ -1.36
CMSS1-209ENST00000497345 FHDC1Q9C0D6 1143 aaPredicted RBP6.56□□□□□ -1.36
CMSS1-209ENST00000497345 NUCKS1Q9H1E3 243 aaKnown RBP6.56□□□□□ -1.36
CMSS1-209ENST00000497345 ENAMQ9NRM1 1142 aa6.56□□□□□ -1.36
CMSS1-209ENST00000497345 ANP32CO43423 234 aa6.55□□□□□ -1.36
CMSS1-209ENST00000497345 GTF2E1P29083 439 aaPredicted RBP6.55□□□□□ -1.36
CMSS1-209ENST00000497345 ABL2P42684 1182 aa6.55□□□□□ -1.36
CMSS1-209ENST00000497345 WASHC4Q2M389 1173 aa6.55□□□□□ -1.36
CMSS1-209ENST00000497345 TMEM214Q6NUQ4 689 aaKnown RBP6.55□□□□□ -1.36
CMSS1-209ENST00000497345 SIRT1Q96EB6 747 aa6.55□□□□□ -1.36
CMSS1-209ENST00000497345 SCARF2Q96GP6 870 aaPredicted RBP6.55□□□□□ -1.36
CMSS1-209ENST00000497345 SLC26A8Q96RN1 970 aa6.55□□□□□ -1.36
CMSS1-209ENST00000497345 POGKQ9P215 609 aa6.55□□□□□ -1.36
CMSS1-209ENST00000497345 DISP3Q9P2K9 1392 aa6.55□□□□□ -1.36
CMSS1-209ENST00000497345 PIK3C2GO75747 1445 aa6.54□□□□□ -1.36
CMSS1-209ENST00000497345 A0A1B0GTH6 734 aa6.54□□□□□ -1.36
CMSS1-209ENST00000497345 MX2P20592 715 aa6.54□□□□□ -1.36
CMSS1-209ENST00000497345 LTKP29376 864 aa6.54□□□□□ -1.36
CMSS1-209ENST00000497345 IRS1P35568 1242 aa6.54□□□□□ -1.36
CMSS1-209ENST00000497345 TMF1P82094 1093 aa6.54□□□□□ -1.36
CMSS1-209ENST00000497345 OXLD1Q5BKU9 147 aa6.54□□□□□ -1.36
CMSS1-209ENST00000497345 GNASQ5JWF2 1037 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms