RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
SCNM1-206ENST00000497147 BRPF1P55201 1214 aaPredicted RBP12.92□□□□□ -0.34
SCNM1-206ENST00000497147 SOX10P56693 466 aa12.92□□□□□ -0.34
SCNM1-206ENST00000497147 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
SCNM1-206ENST00000497147 TTC5Q8N0Z6 440 aa12.92□□□□□ -0.34
SCNM1-206ENST00000497147 ZIC5Q96T25 663 aa12.92□□□□□ -0.34
SCNM1-206ENST00000497147 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
SCNM1-206ENST00000497147 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
SCNM1-206ENST00000497147 LMOD1P29536 600 aaPredicted RBP12.91□□□□□ -0.34
SCNM1-206ENST00000497147 CIAPIN1Q6FI81 312 aa12.91□□□□□ -0.34
SCNM1-206ENST00000497147 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
SCNM1-206ENST00000497147 USP50Q70EL3 339 aaPredicted RBP12.91□□□□□ -0.34
SCNM1-206ENST00000497147 DZIP3Q86Y13 1208 aaKnown RBP12.91□□□□□ -0.34
SCNM1-206ENST00000497147 MIER1Q8N108 512 aa12.91□□□□□ -0.34
SCNM1-206ENST00000497147 JDP2Q8WYK2 163 aa12.91□□□□□ -0.34
SCNM1-206ENST00000497147 PSMD1Q99460 953 aa12.91□□□□□ -0.34
SCNM1-206ENST00000497147 CCER2I3L3R5 266 aa12.9□□□□□ -0.34
SCNM1-206ENST00000497147 CELF2O95319 508 aaKnown RBP12.9□□□□□ -0.34
SCNM1-206ENST00000497147 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
SCNM1-206ENST00000497147 EIF6P56537 245 aaKnown RBP12.9□□□□□ -0.34
SCNM1-206ENST00000497147 PRPF38BQ5VTL8 546 aaKnown RBP12.9□□□□□ -0.34
SCNM1-206ENST00000497147 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
SCNM1-206ENST00000497147 TEX13AQ9BXU3 409 aaPredicted RBP12.9□□□□□ -0.34
SCNM1-206ENST00000497147 IL17REQ8NFR9 667 aa12.89□□□□□ -0.35
SCNM1-206ENST00000497147 HHIPL1Q96JK4 782 aa12.89□□□□□ -0.35
SCNM1-206ENST00000497147 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
SCNM1-206ENST00000497147 BCORQ6W2J9 1755 aa12.89□□□□□ -0.35
SCNM1-206ENST00000497147 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
SCNM1-206ENST00000497147 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
SCNM1-206ENST00000497147 CLEC4GQ6UXB4 293 aa12.88□□□□□ -0.35
SCNM1-206ENST00000497147 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
SCNM1-206ENST00000497147 GLIS2Q9BZE0 524 aaPredicted RBP12.88□□□□□ -0.35
SCNM1-206ENST00000497147 FAM177BA6PVY3 158 aa12.87□□□□□ -0.35
SCNM1-206ENST00000497147 KCNQ3O43525 872 aa12.87□□□□□ -0.35
SCNM1-206ENST00000497147 TPTE2Q6XPS3 522 aa12.87□□□□□ -0.35
SCNM1-206ENST00000497147 FAM9BQ8IZU0 186 aa12.87□□□□□ -0.35
SCNM1-206ENST00000497147 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
SCNM1-206ENST00000497147 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
SCNM1-206ENST00000497147 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
SCNM1-206ENST00000497147 NPM2Q86SE8 214 aaKnown RBP12.86□□□□□ -0.35
SCNM1-206ENST00000497147 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
SCNM1-206ENST00000497147 RUNDC1Q96C34 613 aa12.86□□□□□ -0.35
SCNM1-206ENST00000497147 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
SCNM1-206ENST00000497147 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
SCNM1-206ENST00000497147 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
SCNM1-206ENST00000497147 NIP7Q9Y221 180 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCNM1-206ENST00000497147 USP16Q9Y5T5 823 aa12.86□□□□□ -0.35
SCNM1-206ENST00000497147 TEFQ10587 303 aa12.85□□□□□ -0.35
SCNM1-206ENST00000497147 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
SCNM1-206ENST00000497147 PLEKHF1Q96S99 279 aa12.85□□□□□ -0.35
SCNM1-206ENST00000497147 ADARB2Q9NS39 739 aaKnown RBP12.85□□□□□ -0.35
SCNM1-206ENST00000497147 PGAP2Q9UHJ9 254 aa12.85□□□□□ -0.35
SCNM1-206ENST00000497147 HIRAP54198 1017 aaPredicted RBP12.84□□□□□ -0.35
SCNM1-206ENST00000497147 NOGQ13253 232 aa12.84□□□□□ -0.35
SCNM1-206ENST00000497147 DLK2Q6UY11 383 aa12.84□□□□□ -0.35
SCNM1-206ENST00000497147 ZNF408Q9H9D4 720 aa12.84□□□□□ -0.35
SCNM1-206ENST00000497147 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
SCNM1-206ENST00000497147 ABCC12Q96J65 1359 aa12.83□□□□□ -0.36
SCNM1-206ENST00000497147 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
SCNM1-206ENST00000497147 HLFQ16534 295 aa12.83□□□□□ -0.36
SCNM1-206ENST00000497147 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
SCNM1-206ENST00000497147 RTF1Q92541 710 aaKnown RBP12.83□□□□□ -0.36
SCNM1-206ENST00000497147 SIPA1L3O60292 1781 aaPredicted RBP12.82□□□□□ -0.36
SCNM1-206ENST00000497147 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
SCNM1-206ENST00000497147 NBPF26B4DH59 902 aa12.82□□□□□ -0.36
SCNM1-206ENST00000497147 GMPSP49915 693 aaPredicted RBP12.82□□□□□ -0.36
SCNM1-206ENST00000497147 CXCL9Q07325 125 aa12.82□□□□□ -0.36
SCNM1-206ENST00000497147 NFE2L2Q16236 605 aa12.82□□□□□ -0.36
SCNM1-206ENST00000497147 NBPF10Q6P3W6 841 aaKnown RBP12.82□□□□□ -0.36
SCNM1-206ENST00000497147 NIM1KQ8IY84 436 aa12.82□□□□□ -0.36
SCNM1-206ENST00000497147 NBPF15Q8N660 670 aa12.82□□□□□ -0.36
SCNM1-206ENST00000497147 MKI67P46013 3256 aaKnown RBP12.81□□□□□ -0.36
SCNM1-206ENST00000497147 TCERG1O14776 1098 aaKnown RBP12.81□□□□□ -0.36
SCNM1-206ENST00000497147 HOXA10P31260 410 aaPredicted RBP12.81□□□□□ -0.36
SCNM1-206ENST00000497147 HUNKP57058 714 aa12.81□□□□□ -0.36
SCNM1-206ENST00000497147 AOC3Q16853 763 aa12.81□□□□□ -0.36
SCNM1-206ENST00000497147 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
SCNM1-206ENST00000497147 SAGE1Q9NXZ1 904 aa12.81□□□□□ -0.36
SCNM1-206ENST00000497147 DLG5Q8TDM6 1919 aa12.81□□□□□ -0.36
SCNM1-206ENST00000497147 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
SCNM1-206ENST00000497147 BTBD11A6QL63 1104 aa12.8□□□□□ -0.36
SCNM1-206ENST00000497147 RGL2O15211 777 aa12.8□□□□□ -0.36
SCNM1-206ENST00000497147 TRPA1O75762 1119 aa12.8□□□□□ -0.36
SCNM1-206ENST00000497147 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
SCNM1-206ENST00000497147 TMPOP42166 694 aaKnown RBP12.8□□□□□ -0.36
SCNM1-206ENST00000497147 RIPK4P57078 832 aa12.8□□□□□ -0.36
SCNM1-206ENST00000497147 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
SCNM1-206ENST00000497147 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
SCNM1-206ENST00000497147 TRPM4Q8TD43 1214 aa12.8□□□□□ -0.36
SCNM1-206ENST00000497147 RNF186Q9NXI6 227 aa12.8□□□□□ -0.36
SCNM1-206ENST00000497147 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
SCNM1-206ENST00000497147 SHTN1A0MZ66 631 aa12.79□□□□□ -0.36
SCNM1-206ENST00000497147 APAF1O14727 1248 aa12.79□□□□□ -0.36
SCNM1-206ENST00000497147 PPIP5K2O43314 1243 aa12.79□□□□□ -0.36
SCNM1-206ENST00000497147 HTATSF1O43719 755 aaKnown RBP12.79□□□□□ -0.36
SCNM1-206ENST00000497147 KIF23Q02241 960 aaPredicted RBP12.79□□□□□ -0.36
SCNM1-206ENST00000497147 GRIPAP1Q4V328 841 aa12.79□□□□□ -0.36
SCNM1-206ENST00000497147 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
SCNM1-206ENST00000497147 USP48Q86UV5 1035 aa12.79□□□□□ -0.36
SCNM1-206ENST00000497147 ZC3H15Q8WU90 426 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms