RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 SASH1O94885 1247 aa18■□□□□ 0.47
UBXN11-216ENST00000496466 MBD3O95983 291 aa18■□□□□ 0.47
UBXN11-216ENST00000496466 AK2P54819 239 aa18■□□□□ 0.47
UBXN11-216ENST00000496466 JARID2Q92833 1246 aaPredicted RBP18■□□□□ 0.47
UBXN11-216ENST00000496466 RBSNQ9H1K0 784 aa18■□□□□ 0.47
UBXN11-216ENST00000496466 IL2RBP14784 551 aa17.99■□□□□ 0.47
UBXN11-216ENST00000496466 PRIM1P49642 420 aaKnown RBP17.99■□□□□ 0.47
UBXN11-216ENST00000496466 PTH1RQ03431 593 aa17.99■□□□□ 0.47
UBXN11-216ENST00000496466 CARD10Q9BWT7 1032 aa17.99■□□□□ 0.47
UBXN11-216ENST00000496466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.99■□□□□ 0.47
UBXN11-216ENST00000496466 PARP4Q9UKK3 1724 aaKnown RBP17.99■□□□□ 0.47
UBXN11-216ENST00000496466 GLI3P10071 1580 aa17.99■□□□□ 0.47
UBXN11-216ENST00000496466 G3BP1Q13283 466 aaKnown RBP eCLIP17.99■□□□□ 0.47
UBXN11-216ENST00000496466 EPHA10Q5JZY3 1008 aa17.99■□□□□ 0.47
UBXN11-216ENST00000496466 DDX54Q8TDD1 881 aaKnown RBP17.99■□□□□ 0.47
UBXN11-216ENST00000496466 ANP32BQ92688 251 aaKnown RBP17.99■□□□□ 0.47
UBXN11-216ENST00000496466 EVI5LQ96CN4 794 aa17.99■□□□□ 0.47
UBXN11-216ENST00000496466 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
UBXN11-216ENST00000496466 RUFY3Q7L099 469 aa17.98■□□□□ 0.47
UBXN11-216ENST00000496466 EVA1CP58658 441 aa17.98■□□□□ 0.47
UBXN11-216ENST00000496466 KLHDC4Q8TBB5 520 aa17.98■□□□□ 0.47
UBXN11-216ENST00000496466 EAF2Q96CJ1 260 aaPredicted RBP17.98■□□□□ 0.47
UBXN11-216ENST00000496466 LIMCH1Q9UPQ0 1083 aa17.98■□□□□ 0.47
UBXN11-216ENST00000496466 RPAP1Q9BWH6 1393 aaPredicted RBP17.98■□□□□ 0.47
UBXN11-216ENST00000496466 ABCA3Q99758 1704 aa17.97■□□□□ 0.47
UBXN11-216ENST00000496466 LRSAM1Q6UWE0 723 aa17.97■□□□□ 0.47
UBXN11-216ENST00000496466 NBPF26B4DH59 902 aa17.97■□□□□ 0.47
UBXN11-216ENST00000496466 ERVV-2B6SEH9 535 aa17.97■□□□□ 0.47
UBXN11-216ENST00000496466 ATP5J2-PTCD1G3V325 749 aa17.97■□□□□ 0.47
UBXN11-216ENST00000496466 PTCD1O75127 700 aaKnown RBP17.97■□□□□ 0.47
UBXN11-216ENST00000496466 NBPF14Q5TI25 921 aa17.97■□□□□ 0.47
UBXN11-216ENST00000496466 NBPF10Q6P3W6 841 aaKnown RBP17.97■□□□□ 0.47
UBXN11-216ENST00000496466 NBPF15Q8N660 670 aa17.97■□□□□ 0.47
UBXN11-216ENST00000496466 KCNB2Q92953 911 aa17.97■□□□□ 0.47
UBXN11-216ENST00000496466 SIL1Q9H173 461 aa17.97■□□□□ 0.47
UBXN11-216ENST00000496466 CPA1P15085 419 aa17.96■□□□□ 0.47
UBXN11-216ENST00000496466 CASTP20810 708 aaKnown RBP17.96■□□□□ 0.47
UBXN11-216ENST00000496466 LARP6Q9BRS8 491 aaKnown RBP17.96■□□□□ 0.47
UBXN11-216ENST00000496466 CCDC8Q9H0W5 538 aaPredicted RBP17.96■□□□□ 0.47
UBXN11-216ENST00000496466 SYCE3A1L190 88 aa17.95■□□□□ 0.46
UBXN11-216ENST00000496466 NKX1-1Q15270 411 aaPredicted RBP17.95■□□□□ 0.46
UBXN11-216ENST00000496466 PRPF40BQ6NWY9 871 aaKnown RBP17.95■□□□□ 0.46
UBXN11-216ENST00000496466 FOXD4L6Q3SYB3 417 aaPredicted RBP17.94■□□□□ 0.46
UBXN11-216ENST00000496466 FOXD4L3Q6VB84 417 aaPredicted RBP17.94■□□□□ 0.46
UBXN11-216ENST00000496466 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
UBXN11-216ENST00000496466 TLR7Q9NYK1 1049 aaKnown RBP17.94■□□□□ 0.46
UBXN11-216ENST00000496466 ADCK5Q3MIX3 580 aa17.94■□□□□ 0.46
UBXN11-216ENST00000496466 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
UBXN11-216ENST00000496466 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
UBXN11-216ENST00000496466 JAKMIP1Q96N16 626 aaKnown RBP17.94■□□□□ 0.46
UBXN11-216ENST00000496466 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.94■□□□□ 0.46
UBXN11-216ENST00000496466 CCDC171Q6TFL3 1326 aa17.94■□□□□ 0.46
UBXN11-216ENST00000496466 NECTIN1Q15223 517 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 USP48Q86UV5 1035 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 ZSWIM6Q9HCJ5 1215 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 LAMB4A4D0S4 1761 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 HIP1O00291 1037 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 GADD45BO75293 160 aaPredicted RBP17.93■□□□□ 0.46
UBXN11-216ENST00000496466 LARGE1O95461 756 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 A1BGP04217 495 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 NMIQ13287 307 aaPredicted RBP17.93■□□□□ 0.46
UBXN11-216ENST00000496466 VPS53Q5VIR6 699 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 FAM227BQ96M60 508 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 GDPD2Q9HCC8 539 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 PDRG1Q9NUG6 133 aa17.93■□□□□ 0.46
UBXN11-216ENST00000496466 ZSCAN22P10073 491 aaPredicted RBP17.92■□□□□ 0.46
UBXN11-216ENST00000496466 TTLL7Q6ZT98 887 aa17.92■□□□□ 0.46
UBXN11-216ENST00000496466 NHSL1Q5SYE7 1610 aa17.92■□□□□ 0.46
UBXN11-216ENST00000496466 A0A087WZG4 1122 aa17.92■□□□□ 0.46
UBXN11-216ENST00000496466 SMC3Q9UQE7 1217 aa17.92■□□□□ 0.46
UBXN11-216ENST00000496466 CYP46A1Q9Y6A2 500 aa17.92■□□□□ 0.46
UBXN11-216ENST00000496466 ARFGEF2Q9Y6D5 1785 aa17.92■□□□□ 0.46
UBXN11-216ENST00000496466 KCPQ6ZWJ8 1503 aa17.91■□□□□ 0.46
UBXN11-216ENST00000496466 SHANK3Q9BYB0 1731 aa17.91■□□□□ 0.46
UBXN11-216ENST00000496466 SYT1P21579 422 aa17.91■□□□□ 0.46
UBXN11-216ENST00000496466 MAP4K1Q92918 833 aa17.91■□□□□ 0.46
UBXN11-216ENST00000496466 PKNOX2Q96KN3 472 aa17.91■□□□□ 0.46
UBXN11-216ENST00000496466 BOLA2Q9H3K6 86 aa17.91■□□□□ 0.46
UBXN11-216ENST00000496466 SNRKQ9NRH2 765 aa17.91■□□□□ 0.46
UBXN11-216ENST00000496466 RBM8AQ9Y5S9 174 aaKnown RBP17.91■□□□□ 0.46
UBXN11-216ENST00000496466 TCHHQ07283 1943 aa17.91■□□□□ 0.46
UBXN11-216ENST00000496466 STX6O43752 255 aa17.9■□□□□ 0.46
UBXN11-216ENST00000496466 CREB3L3Q68CJ9 461 aa17.9■□□□□ 0.46
UBXN11-216ENST00000496466 TMEM87AQ8NBN3 555 aa17.9■□□□□ 0.46
UBXN11-216ENST00000496466 PDLIM2Q96JY6 352 aa17.9■□□□□ 0.46
UBXN11-216ENST00000496466 RFX5P48382 616 aaPredicted RBP17.9■□□□□ 0.46
UBXN11-216ENST00000496466 AFDNP55196 1824 aaKnown RBP17.9■□□□□ 0.46
UBXN11-216ENST00000496466 CASP7P55210 303 aa17.9■□□□□ 0.46
UBXN11-216ENST00000496466 UBR2Q8IWV8 1755 aa17.9■□□□□ 0.46
UBXN11-216ENST00000496466 SYAP1Q96A49 352 aaPredicted RBP17.9■□□□□ 0.46
UBXN11-216ENST00000496466 ZSCAN31Q96LW9 406 aaPredicted RBP17.9■□□□□ 0.46
UBXN11-216ENST00000496466 ZKSCAN1P17029 563 aaPredicted RBP17.89■□□□□ 0.46
UBXN11-216ENST00000496466 GLIPR1L2Q4G1C9 344 aa17.89■□□□□ 0.46
UBXN11-216ENST00000496466 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.46
UBXN11-216ENST00000496466 BTG4Q9NY30 223 aa17.89■□□□□ 0.46
UBXN11-216ENST00000496466 RABL6Q3YEC7 729 aaPredicted RBP17.89■□□□□ 0.45
UBXN11-216ENST00000496466 ZSCAN30Q86W11 494 aa17.89■□□□□ 0.45
UBXN11-216ENST00000496466 COPRSQ9NQ92 184 aa17.89■□□□□ 0.45
UBXN11-216ENST00000496466 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
UBXN11-216ENST00000496466 A0A0D9SFI3 127 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms