RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 TMX4Q9H1E5 349 aaPredicted RBP15.96■□□□□ 0.15
ATG3-209ENST00000496423 AKAP11Q9UKA4 1901 aa15.96■□□□□ 0.14
ATG3-209ENST00000496423 TRPA1O75762 1119 aa15.95■□□□□ 0.14
ATG3-209ENST00000496423 CAMTA2O94983 1202 aa15.95■□□□□ 0.14
ATG3-209ENST00000496423 HUNKP57058 714 aa15.95■□□□□ 0.14
ATG3-209ENST00000496423 DZIP3Q86Y13 1208 aaKnown RBP15.95■□□□□ 0.14
ATG3-209ENST00000496423 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
ATG3-209ENST00000496423 OLFM4Q6UX06 510 aa15.94■□□□□ 0.14
ATG3-209ENST00000496423 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
ATG3-209ENST00000496423 GLIS2Q9BZE0 524 aaPredicted RBP15.94■□□□□ 0.14
ATG3-209ENST00000496423 GPRC5DQ9NZD1 345 aa15.94■□□□□ 0.14
ATG3-209ENST00000496423 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
ATG3-209ENST00000496423 BCORQ6W2J9 1755 aa15.94■□□□□ 0.14
ATG3-209ENST00000496423 MRC1P22897 1456 aa15.93■□□□□ 0.14
ATG3-209ENST00000496423 RGMBQ6NW40 437 aa15.93■□□□□ 0.14
ATG3-209ENST00000496423 PGAP2Q9UHJ9 254 aa15.93■□□□□ 0.14
ATG3-209ENST00000496423 HPS5Q9UPZ3 1129 aa15.93■□□□□ 0.14
ATG3-209ENST00000496423 C2orf69Q8N8R5 385 aa15.92■□□□□ 0.14
ATG3-209ENST00000496423 VPS33BQ9H267 617 aa15.92■□□□□ 0.14
ATG3-209ENST00000496423 RNF186Q9NXI6 227 aa15.92■□□□□ 0.14
ATG3-209ENST00000496423 HDAC9Q9UKV0 1011 aa15.92■□□□□ 0.14
ATG3-209ENST00000496423 HEG1Q9ULI3 1381 aa15.91■□□□□ 0.14
ATG3-209ENST00000496423 UBR2Q8IWV8 1755 aa15.91■□□□□ 0.14
ATG3-209ENST00000496423 KIF23Q02241 960 aaPredicted RBP15.91■□□□□ 0.14
ATG3-209ENST00000496423 TEFQ10587 303 aa15.9■□□□□ 0.14
ATG3-209ENST00000496423 BCL2L13Q9BXK5 485 aa15.9■□□□□ 0.14
ATG3-209ENST00000496423 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
ATG3-209ENST00000496423 A1BGP04217 495 aa15.89■□□□□ 0.13
ATG3-209ENST00000496423 ZNF157P51786 506 aaPredicted RBP15.89■□□□□ 0.13
ATG3-209ENST00000496423 ZNF790Q6PG37 636 aa15.89■□□□□ 0.13
ATG3-209ENST00000496423 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
ATG3-209ENST00000496423 ZNF496Q96IT1 587 aaPredicted RBP15.89■□□□□ 0.13
ATG3-209ENST00000496423 FMNL2Q96PY5 1086 aa15.89■□□□□ 0.13
ATG3-209ENST00000496423 ZIC5Q96T25 663 aa15.89■□□□□ 0.13
ATG3-209ENST00000496423 NIP7Q9Y221 180 aaKnown RBP eCLIP15.89■□□□□ 0.13
ATG3-209ENST00000496423 RGL2O15211 777 aa15.88■□□□□ 0.13
ATG3-209ENST00000496423 PPIP5K2O43314 1243 aa15.88■□□□□ 0.13
ATG3-209ENST00000496423 FAM177BA6PVY3 158 aa15.87■□□□□ 0.13
ATG3-209ENST00000496423 H7C1D1 291 aa15.87■□□□□ 0.13
ATG3-209ENST00000496423 TNIP1Q15025 636 aa15.87■□□□□ 0.13
ATG3-209ENST00000496423 SUPT20HQ8NEM7 779 aa15.87■□□□□ 0.13
ATG3-209ENST00000496423 NYXQ9GZU5 481 aa15.87■□□□□ 0.13
ATG3-209ENST00000496423 GBA2Q9HCG7 927 aaPredicted RBP15.87■□□□□ 0.13
ATG3-209ENST00000496423 ZNRF3Q9ULT6 936 aa15.87■□□□□ 0.13
ATG3-209ENST00000496423 FAM155AB1AL88 458 aaPredicted RBP15.86■□□□□ 0.13
ATG3-209ENST00000496423 USP48Q86UV5 1035 aa15.86■□□□□ 0.13
ATG3-209ENST00000496423 MORC1Q86VD1 984 aa15.86■□□□□ 0.13
ATG3-209ENST00000496423 GMPSP49915 693 aaPredicted RBP15.85■□□□□ 0.13
ATG3-209ENST00000496423 NPC1L1Q9UHC9 1359 aa15.85■□□□□ 0.13
ATG3-209ENST00000496423 IL13P35225 146 aa15.84■□□□□ 0.13
ATG3-209ENST00000496423 CXCL9Q07325 125 aa15.84■□□□□ 0.13
ATG3-209ENST00000496423 RBM17Q96I25 401 aaKnown RBP15.84■□□□□ 0.13
ATG3-209ENST00000496423 CSRNP1Q96S65 589 aa15.84■□□□□ 0.13
ATG3-209ENST00000496423 DLL1O00548 723 aa15.83■□□□□ 0.12
ATG3-209ENST00000496423 FXR1P51114 621 aaKnown RBP eCLIP15.83■□□□□ 0.12
ATG3-209ENST00000496423 MTHFSDQ2M296 383 aaKnown RBP15.83■□□□□ 0.12
ATG3-209ENST00000496423 CRY2Q49AN0 593 aa15.83■□□□□ 0.12
ATG3-209ENST00000496423 FBXO46Q6PJ61 603 aaPredicted RBP15.83■□□□□ 0.12
ATG3-209ENST00000496423 POLR3GLQ9BT43 218 aa15.83■□□□□ 0.12
ATG3-209ENST00000496423 PPEF1O14829 653 aaPredicted RBP15.82■□□□□ 0.12
ATG3-209ENST00000496423 HOXA10P31260 410 aaPredicted RBP15.82■□□□□ 0.12
ATG3-209ENST00000496423 AOC3Q16853 763 aa15.82■□□□□ 0.12
ATG3-209ENST00000496423 DCPSQ96C86 337 aaKnown RBP15.82■□□□□ 0.12
ATG3-209ENST00000496423 CNOT7Q9UIV1 285 aaKnown RBP15.82■□□□□ 0.12
ATG3-209ENST00000496423 SNED1Q8TER0 1413 aa15.82■□□□□ 0.12
ATG3-209ENST00000496423 COL4A5P29400 1685 aa15.81■□□□□ 0.12
ATG3-209ENST00000496423 HIRAP54198 1017 aaPredicted RBP15.81■□□□□ 0.12
ATG3-209ENST00000496423 KRT26Q7Z3Y9 468 aa15.81■□□□□ 0.12
ATG3-209ENST00000496423 CRAMP1Q96RY5 1269 aa15.81■□□□□ 0.12
ATG3-209ENST00000496423 KIF7Q2M1P5 1343 aa15.8■□□□□ 0.12
ATG3-209ENST00000496423 TCERG1O14776 1098 aaKnown RBP15.8■□□□□ 0.12
ATG3-209ENST00000496423 SLC10A3P09131 477 aa15.8■□□□□ 0.12
ATG3-209ENST00000496423 HMOX1P09601 288 aa15.8■□□□□ 0.12
ATG3-209ENST00000496423 INTS3Q68E01 1043 aaKnown RBP15.8■□□□□ 0.12
ATG3-209ENST00000496423 GNAT3A8MTJ3 354 aa15.79■□□□□ 0.12
ATG3-209ENST00000496423 ZNF296Q8WUU4 475 aaPredicted RBP15.78■□□□□ 0.12
ATG3-209ENST00000496423 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
ATG3-209ENST00000496423 BTBD11A6QL63 1104 aa15.77■□□□□ 0.12
ATG3-209ENST00000496423 RAD17O75943 681 aa15.77■□□□□ 0.12
ATG3-209ENST00000496423 SLC17A8Q8NDX2 589 aa15.77■□□□□ 0.12
ATG3-209ENST00000496423 TRPM4Q8TD43 1214 aa15.77■□□□□ 0.12
ATG3-209ENST00000496423 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
ATG3-209ENST00000496423 NOM1Q5C9Z4 860 aaKnown RBP15.76■□□□□ 0.11
ATG3-209ENST00000496423 MICALL2Q8IY33 904 aa15.76■□□□□ 0.11
ATG3-209ENST00000496423 GAS2L2Q8NHY3 880 aa15.76■□□□□ 0.11
ATG3-209ENST00000496423 DPF2Q92785 391 aa15.76■□□□□ 0.11
ATG3-209ENST00000496423 ATP6V0A2Q9Y487 856 aa15.76■□□□□ 0.11
ATG3-209ENST00000496423 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
ATG3-209ENST00000496423 PIP4K2AP48426 406 aaPredicted RBP15.75■□□□□ 0.11
ATG3-209ENST00000496423 DPP8Q6V1X1 898 aaPredicted RBP15.75■□□□□ 0.11
ATG3-209ENST00000496423 NUTM1Q86Y26 1132 aa15.75■□□□□ 0.11
ATG3-209ENST00000496423 SULF1Q8IWU6 871 aa15.75■□□□□ 0.11
ATG3-209ENST00000496423 POLR2AP24928 1970 aaKnown RBP15.75■□□□□ 0.11
ATG3-209ENST00000496423 TBC1D8O95759 1140 aa15.74■□□□□ 0.11
ATG3-209ENST00000496423 KIAA2012Q0VF49 1180 aa15.74■□□□□ 0.11
ATG3-209ENST00000496423 MPNDQ8N594 471 aa15.74■□□□□ 0.11
ATG3-209ENST00000496423 IL17REQ8NFR9 667 aa15.74■□□□□ 0.11
ATG3-209ENST00000496423 NLRP3Q96P20 1036 aa15.74■□□□□ 0.11
ATG3-209ENST00000496423 RTFDC1Q9BY42 306 aaPredicted RBP15.74■□□□□ 0.11
ATG3-209ENST00000496423 GPR25O00155 361 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms