RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 RTL5Q5HYW3 569 aaPredicted RBP20.2■□□□□ 0.82
HLA-A-208ENST00000496081 MX1P20591 662 aa20.19■□□□□ 0.82
HLA-A-208ENST00000496081 FOXO4P98177 505 aa20.19■□□□□ 0.82
HLA-A-208ENST00000496081 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
HLA-A-208ENST00000496081 ERVV-1B6SEH8 477 aa20.18■□□□□ 0.82
HLA-A-208ENST00000496081 ERC1Q8IUD2 1116 aa20.18■□□□□ 0.82
HLA-A-208ENST00000496081 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
HLA-A-208ENST00000496081 NUP98P52948 1817 aa20.18■□□□□ 0.82
HLA-A-208ENST00000496081 ANKRD36CQ5JPF3 1778 aa20.18■□□□□ 0.82
HLA-A-208ENST00000496081 RFX5P48382 616 aaPredicted RBP20.18■□□□□ 0.82
HLA-A-208ENST00000496081 HSP90AB3PQ58FF7 597 aa20.18■□□□□ 0.82
HLA-A-208ENST00000496081 SBF2Q86WG5 1849 aa20.17■□□□□ 0.82
HLA-A-208ENST00000496081 SDSP20132 328 aa20.17■□□□□ 0.82
HLA-A-208ENST00000496081 TSHZ3Q63HK5 1081 aa20.17■□□□□ 0.82
HLA-A-208ENST00000496081 LMBR1LQ6UX01 489 aa20.17■□□□□ 0.82
HLA-A-208ENST00000496081 NUTM1Q86Y26 1132 aa20.17■□□□□ 0.82
HLA-A-208ENST00000496081 KLHDC4Q8TBB5 520 aa20.17■□□□□ 0.82
HLA-A-208ENST00000496081 IPO9Q96P70 1041 aaKnown RBP20.17■□□□□ 0.82
HLA-A-208ENST00000496081 UPF2Q9HAU5 1272 aaKnown RBP20.17■□□□□ 0.82
HLA-A-208ENST00000496081 G3BP1Q13283 466 aaKnown RBP eCLIP20.16■□□□□ 0.82
HLA-A-208ENST00000496081 TBC1D9Q6ZT07 1266 aa20.16■□□□□ 0.82
HLA-A-208ENST00000496081 COPRSQ9NQ92 184 aa20.16■□□□□ 0.82
HLA-A-208ENST00000496081 CDC45O75419 566 aa20.16■□□□□ 0.82
HLA-A-208ENST00000496081 SASH1O94885 1247 aa20.16■□□□□ 0.82
HLA-A-208ENST00000496081 PCCAP05165 728 aaPredicted RBP20.16■□□□□ 0.82
HLA-A-208ENST00000496081 NLRP10Q86W26 655 aa20.16■□□□□ 0.82
HLA-A-208ENST00000496081 LINC00116Q8NCU8 138 aa20.16■□□□□ 0.82
HLA-A-208ENST00000496081 GPTP24298 496 aa20.15■□□□□ 0.82
HLA-A-208ENST00000496081 MFAP1P55081 439 aaKnown RBP20.15■□□□□ 0.82
HLA-A-208ENST00000496081 PTPN12Q05209 780 aaKnown RBP20.15■□□□□ 0.82
HLA-A-208ENST00000496081 BRWD3Q6RI45 1802 aa20.15■□□□□ 0.82
HLA-A-208ENST00000496081 TUBGCP6Q96RT7 1819 aa20.15■□□□□ 0.82
HLA-A-208ENST00000496081 SIL1Q9H173 461 aa20.15■□□□□ 0.82
HLA-A-208ENST00000496081 AOX1Q06278 1338 aa20.14■□□□□ 0.81
HLA-A-208ENST00000496081 MSH5O43196 834 aa20.14■□□□□ 0.81
HLA-A-208ENST00000496081 KCNQ4P56696 695 aa20.14■□□□□ 0.81
HLA-A-208ENST00000496081 CLASRPQ8N2M8 674 aaKnown RBP20.14■□□□□ 0.81
HLA-A-208ENST00000496081 ZBTB38Q8NAP3 1195 aaPredicted RBP20.14■□□□□ 0.81
HLA-A-208ENST00000496081 FAM89AQ96GI7 184 aa20.13■□□□□ 0.81
HLA-A-208ENST00000496081 TBC1D32Q96NH3 1257 aa20.13■□□□□ 0.81
HLA-A-208ENST00000496081 ZNF34Q8IZ26 560 aa20.13■□□□□ 0.81
HLA-A-208ENST00000496081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.13■□□□□ 0.81
HLA-A-208ENST00000496081 CNTNAP4Q9C0A0 1308 aa20.11■□□□□ 0.81
HLA-A-208ENST00000496081 CAMTA2O94983 1202 aa20.11■□□□□ 0.81
HLA-A-208ENST00000496081 KRT27Q7Z3Y8 459 aa20.11■□□□□ 0.81
HLA-A-208ENST00000496081 PLA2G12BQ9BX93 195 aa20.11■□□□□ 0.81
HLA-A-208ENST00000496081 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
HLA-A-208ENST00000496081 UBN2Q6ZU65 1347 aa20.11■□□□□ 0.81
HLA-A-208ENST00000496081 CDHR2Q9BYE9 1310 aa20.11■□□□□ 0.81
HLA-A-208ENST00000496081 USP42Q9H9J4 1324 aaKnown RBP20.11■□□□□ 0.81
HLA-A-208ENST00000496081 LY75O60449 1722 aa20.1■□□□□ 0.81
HLA-A-208ENST00000496081 SYNE4Q8N205 404 aa20.1■□□□□ 0.81
HLA-A-208ENST00000496081 PI4K2BQ8TCG2 481 aa20.1■□□□□ 0.81
HLA-A-208ENST00000496081 AACSQ86V21 672 aa20.09■□□□□ 0.81
HLA-A-208ENST00000496081 EAF2Q96CJ1 260 aaPredicted RBP20.09■□□□□ 0.81
HLA-A-208ENST00000496081 CCNL1Q9UK58 526 aaPredicted RBP20.09■□□□□ 0.81
HLA-A-208ENST00000496081 TTC41PQ6P2S7 1318 aa20.09■□□□□ 0.81
HLA-A-208ENST00000496081 IFIT2P09913 472 aaKnown RBP20.08■□□□□ 0.81
HLA-A-208ENST00000496081 RC3H1Q5TC82 1133 aaKnown RBP20.08■□□□□ 0.81
HLA-A-208ENST00000496081 DDRGK1Q96HY6 314 aa20.08■□□□□ 0.81
HLA-A-208ENST00000496081 C22orf23Q9BZE7 217 aa20.08■□□□□ 0.81
HLA-A-208ENST00000496081 BCL11BQ9C0K0 894 aaPredicted RBP20.08■□□□□ 0.81
HLA-A-208ENST00000496081 TRMT112Q9UI30 125 aaKnown RBP20.08■□□□□ 0.81
HLA-A-208ENST00000496081 CSF1RP07333 972 aa20.08■□□□□ 0.8
HLA-A-208ENST00000496081 BCORQ6W2J9 1755 aa20.07■□□□□ 0.8
HLA-A-208ENST00000496081 TRIM6-TRIM34B2RNG4 842 aa20.06■□□□□ 0.8
HLA-A-208ENST00000496081 TFCP2Q12800 502 aa20.06■□□□□ 0.8
HLA-A-208ENST00000496081 TAF1LQ8IZX4 1826 aa20.06■□□□□ 0.8
HLA-A-208ENST00000496081 SUSD4Q5VX71 490 aa20.06■□□□□ 0.8
HLA-A-208ENST00000496081 CASC1Q6TDU7 716 aa20.06■□□□□ 0.8
HLA-A-208ENST00000496081 FAM196AQ6ZSG2 479 aa20.06■□□□□ 0.8
HLA-A-208ENST00000496081 ATG9AQ7Z3C6 839 aa20.06■□□□□ 0.8
HLA-A-208ENST00000496081 CCDC8Q9H0W5 538 aaPredicted RBP20.06■□□□□ 0.8
HLA-A-208ENST00000496081 ECHDC1Q9NTX5 307 aa20.06■□□□□ 0.8
HLA-A-208ENST00000496081 IRS4O14654 1257 aaPredicted RBP20.05■□□□□ 0.8
HLA-A-208ENST00000496081 RPS6KA4O75676 772 aa20.05■□□□□ 0.8
HLA-A-208ENST00000496081 RILPL2Q969X0 211 aa20.05■□□□□ 0.8
HLA-A-208ENST00000496081 ZNF594Q96JF6 807 aaPredicted RBP20.05■□□□□ 0.8
HLA-A-208ENST00000496081 GLRX3O76003 335 aaKnown RBP20.04■□□□□ 0.8
HLA-A-208ENST00000496081 CCDC57Q2TAC2 916 aa20.04■□□□□ 0.8
HLA-A-208ENST00000496081 PARP10Q53GL7 1025 aa20.04■□□□□ 0.8
HLA-A-208ENST00000496081 GPATCH3Q96I76 525 aa20.04■□□□□ 0.8
HLA-A-208ENST00000496081 TLR7Q9NYK1 1049 aaKnown RBP20.04■□□□□ 0.8
HLA-A-208ENST00000496081 MYH3P11055 1940 aa20.04■□□□□ 0.8
HLA-A-208ENST00000496081 EYA2O00167 538 aa20.03■□□□□ 0.8
HLA-A-208ENST00000496081 ERC2O15083 957 aa20.03■□□□□ 0.8
HLA-A-208ENST00000496081 EIF5BO60841 1220 aaKnown RBP20.03■□□□□ 0.8
HLA-A-208ENST00000496081 RBM25P49756 843 aaKnown RBP20.03■□□□□ 0.8
HLA-A-208ENST00000496081 TNNI3KQ59H18 835 aa20.03■□□□□ 0.8
HLA-A-208ENST00000496081 CLEC4GQ6UXB4 293 aa20.03■□□□□ 0.8
HLA-A-208ENST00000496081 TTLL11Q8NHH1 800 aa20.03■□□□□ 0.8
HLA-A-208ENST00000496081 FPGT-TNNI3KV9GXZ4 949 aa20.03■□□□□ 0.8
HLA-A-208ENST00000496081 CTSWP56202 376 aa20.03■□□□□ 0.8
HLA-A-208ENST00000496081 SMIM5Q71RC9 77 aa20.03■□□□□ 0.8
HLA-A-208ENST00000496081 CCDC85AQ96PX6 553 aaPredicted RBP20.03■□□□□ 0.8
HLA-A-208ENST00000496081 NIP7Q9Y221 180 aaKnown RBP eCLIP20.03■□□□□ 0.86e-6■□□□□ 11.1
HLA-A-208ENST00000496081 ZNF652Q9Y2D9 606 aa20.03■□□□□ 0.8
HLA-A-208ENST00000496081 GNPATO15228 680 aa20.02■□□□□ 0.8
HLA-A-208ENST00000496081 PDE8AO60658 829 aa20.02■□□□□ 0.8
HLA-A-208ENST00000496081 CIAO1O76071 339 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms