RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 PRAMEF22A3QJZ6 481 aa15.3■□□□□ 0.04
HLA-DOA-206ENST00000495532 FAM177BA6PVY3 158 aa15.3■□□□□ 0.04
HLA-DOA-206ENST00000495532 GNAT3A8MTJ3 354 aa15.3■□□□□ 0.04
HLA-DOA-206ENST00000495532 RGL2O15211 777 aa15.3■□□□□ 0.04
HLA-DOA-206ENST00000495532 CC2D2BQ6DHV5 1058 aa15.3■□□□□ 0.04
HLA-DOA-206ENST00000495532 SLC51AQ86UW1 340 aa15.3■□□□□ 0.04
HLA-DOA-206ENST00000495532 LARGE2Q8N3Y3 721 aa15.3■□□□□ 0.04
HLA-DOA-206ENST00000495532 GLIS2Q9BZE0 524 aaPredicted RBP15.3■□□□□ 0.04
HLA-DOA-206ENST00000495532 GPRC5DQ9NZD1 345 aa15.3■□□□□ 0.04
HLA-DOA-206ENST00000495532 ADARB2Q9NS39 739 aaKnown RBP15.29■□□□□ 0.04
HLA-DOA-206ENST00000495532 NUP98P52948 1817 aa15.29■□□□□ 0.04
HLA-DOA-206ENST00000495532 RIC1Q4ADV7 1423 aa15.28■□□□□ 0.04
HLA-DOA-206ENST00000495532 PGAP2Q9UHJ9 254 aa15.28■□□□□ 0.04
HLA-DOA-206ENST00000495532 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.04
HLA-DOA-206ENST00000495532 NBPF26B4DH59 902 aa15.27■□□□□ 0.04
HLA-DOA-206ENST00000495532 DIAPH1O60610 1272 aaKnown RBP15.27■□□□□ 0.04
HLA-DOA-206ENST00000495532 NOGQ13253 232 aa15.27■□□□□ 0.04
HLA-DOA-206ENST00000495532 AMER1Q5JTC6 1135 aaPredicted RBP15.27■□□□□ 0.04
HLA-DOA-206ENST00000495532 NBPF10Q6P3W6 841 aaKnown RBP15.27■□□□□ 0.04
HLA-DOA-206ENST00000495532 NBPF15Q8N660 670 aa15.27■□□□□ 0.04
HLA-DOA-206ENST00000495532 KNSTRNQ9Y448 316 aa15.27■□□□□ 0.04
HLA-DOA-206ENST00000495532 AKAP11Q9UKA4 1901 aa15.27■□□□□ 0.03
HLA-DOA-206ENST00000495532 BTBD11A6QL63 1104 aa15.26■□□□□ 0.03
HLA-DOA-206ENST00000495532 HOXA10P31260 410 aaPredicted RBP15.26■□□□□ 0.03
HLA-DOA-206ENST00000495532 HLFQ16534 295 aa15.26■□□□□ 0.03
HLA-DOA-206ENST00000495532 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
HLA-DOA-206ENST00000495532 NIM1KQ8IY84 436 aa15.26■□□□□ 0.03
HLA-DOA-206ENST00000495532 GAS2L2Q8NHY3 880 aa15.26■□□□□ 0.03
HLA-DOA-206ENST00000495532 LAMB4A4D0S4 1761 aa15.26■□□□□ 0.03
HLA-DOA-206ENST00000495532 NPC1L1Q9UHC9 1359 aa15.25■□□□□ 0.03
HLA-DOA-206ENST00000495532 KIF7Q2M1P5 1343 aa15.25■□□□□ 0.03
HLA-DOA-206ENST00000495532 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
HLA-DOA-206ENST00000495532 NUTM1Q86Y26 1132 aa15.25■□□□□ 0.03
HLA-DOA-206ENST00000495532 ZNF408Q9H9D4 720 aa15.25■□□□□ 0.03
HLA-DOA-206ENST00000495532 PPIP5K2O43314 1243 aa15.24■□□□□ 0.03
HLA-DOA-206ENST00000495532 HIRAP54198 1017 aaPredicted RBP15.24■□□□□ 0.03
HLA-DOA-206ENST00000495532 CXCL9Q07325 125 aa15.24■□□□□ 0.03
HLA-DOA-206ENST00000495532 SAGE1Q9NXZ1 904 aa15.24■□□□□ 0.03
HLA-DOA-206ENST00000495532 FAM155AB1AL88 458 aaPredicted RBP15.23■□□□□ 0.03
HLA-DOA-206ENST00000495532 PPEF1O14829 653 aaPredicted RBP15.23■□□□□ 0.03
HLA-DOA-206ENST00000495532 SNRPA1P09661 255 aaKnown RBP15.23■□□□□ 0.03
HLA-DOA-206ENST00000495532 GMPSP49915 693 aaPredicted RBP15.23■□□□□ 0.03
HLA-DOA-206ENST00000495532 AOC3Q16853 763 aa15.23■□□□□ 0.03
HLA-DOA-206ENST00000495532 ZC3H15Q8WU90 426 aaKnown RBP15.23■□□□□ 0.03
HLA-DOA-206ENST00000495532 RPGRQ92834 1020 aaKnown RBP15.23■□□□□ 0.03
HLA-DOA-206ENST00000495532 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
HLA-DOA-206ENST00000495532 POLR2AP24928 1970 aaKnown RBP15.22■□□□□ 0.03
HLA-DOA-206ENST00000495532 HUNKP57058 714 aa15.22■□□□□ 0.03
HLA-DOA-206ENST00000495532 CDC37L1Q7L3B6 337 aa15.22■□□□□ 0.03
HLA-DOA-206ENST00000495532 TRPM4Q8TD43 1214 aa15.22■□□□□ 0.03
HLA-DOA-206ENST00000495532 CRAMP1Q96RY5 1269 aa15.22■□□□□ 0.03
HLA-DOA-206ENST00000495532 NYXQ9GZU5 481 aa15.22■□□□□ 0.03
HLA-DOA-206ENST00000495532 IBTKQ9P2D0 1353 aaPredicted RBP15.22■□□□□ 0.03
HLA-DOA-206ENST00000495532 TCERG1O14776 1098 aaKnown RBP15.21■□□□□ 0.03
HLA-DOA-206ENST00000495532 HSPA5P11021 654 aaKnown RBP15.21■□□□□ 0.03
HLA-DOA-206ENST00000495532 ZNRF3Q9ULT6 936 aa15.21■□□□□ 0.03
HLA-DOA-206ENST00000495532 DLK2Q6UY11 383 aa15.2■□□□□ 0.02
HLA-DOA-206ENST00000495532 VPS33BQ9H267 617 aa15.2■□□□□ 0.02
HLA-DOA-206ENST00000495532 UBN2Q6ZU65 1347 aa15.19■□□□□ 0.02
HLA-DOA-206ENST00000495532 EIF4G2P78344 907 aaKnown RBP eCLIP15.19■□□□□ 0.02
HLA-DOA-206ENST00000495532 RGMBQ6NW40 437 aa15.19■□□□□ 0.02
HLA-DOA-206ENST00000495532 C3orf67Q6ZVT6 689 aa15.19■□□□□ 0.02
HLA-DOA-206ENST00000495532 RBM17Q96I25 401 aaKnown RBP15.19■□□□□ 0.02
HLA-DOA-206ENST00000495532 PHACTR3Q96KR7 559 aa15.19■□□□□ 0.02
HLA-DOA-206ENST00000495532 RNF186Q9NXI6 227 aa15.19■□□□□ 0.02
HLA-DOA-206ENST00000495532 TIMELESSQ9UNS1 1208 aa15.19■□□□□ 0.02
HLA-DOA-206ENST00000495532 LAMB2P55268 1798 aa15.19■□□□□ 0.02
HLA-DOA-206ENST00000495532 SHTN1A0MZ66 631 aa15.18■□□□□ 0.02
HLA-DOA-206ENST00000495532 U2SURPO15042 1029 aaKnown RBP15.18■□□□□ 0.02
HLA-DOA-206ENST00000495532 TRPA1O75762 1119 aa15.18■□□□□ 0.02
HLA-DOA-206ENST00000495532 KIF23Q02241 960 aaPredicted RBP15.18■□□□□ 0.02
HLA-DOA-206ENST00000495532 CTU1Q7Z7A3 348 aaKnown RBP15.18■□□□□ 0.02
HLA-DOA-206ENST00000495532 USP48Q86UV5 1035 aa15.18■□□□□ 0.02
HLA-DOA-206ENST00000495532 RTFDC1Q9BY42 306 aaPredicted RBP15.18■□□□□ 0.02
HLA-DOA-206ENST00000495532 ERVV-1B6SEH8 477 aa15.17■□□□□ 0.02
HLA-DOA-206ENST00000495532 BCL2L13Q9BXK5 485 aa15.17■□□□□ 0.02
HLA-DOA-206ENST00000495532 ATP6V0A2Q9Y487 856 aa15.17■□□□□ 0.02
HLA-DOA-206ENST00000495532 RAD17O75943 681 aa15.16■□□□□ 0.02
HLA-DOA-206ENST00000495532 SUSD4Q5VX71 490 aa15.16■□□□□ 0.02
HLA-DOA-206ENST00000495532 GBA2Q9HCG7 927 aaPredicted RBP15.16■□□□□ 0.02
HLA-DOA-206ENST00000495532 CNOT7Q9UIV1 285 aaKnown RBP15.16■□□□□ 0.02
HLA-DOA-206ENST00000495532 HPS5Q9UPZ3 1129 aa15.16■□□□□ 0.02
HLA-DOA-206ENST00000495532 MAP3K15Q6ZN16 1313 aa15.16■□□□□ 0.02
HLA-DOA-206ENST00000495532 DUOX1Q9NRD9 1551 aa15.15■□□□□ 0.02
HLA-DOA-206ENST00000495532 NTSR2O95665 410 aa15.15■□□□□ 0.02
HLA-DOA-206ENST00000495532 GPTP24298 496 aa15.15■□□□□ 0.02
HLA-DOA-206ENST00000495532 KIAA2012Q0VF49 1180 aa15.15■□□□□ 0.02
HLA-DOA-206ENST00000495532 SUPT20HQ8NEM7 779 aa15.15■□□□□ 0.02
HLA-DOA-206ENST00000495532 CCDC102AQ96A19 550 aa15.15■□□□□ 0.02
HLA-DOA-206ENST00000495532 ANKRD36CQ5JPF3 1778 aa15.15■□□□□ 0.02
HLA-DOA-206ENST00000495532 KDM3BQ7LBC6 1761 aa15.15■□□□□ 0.02
HLA-DOA-206ENST00000495532 YDJCA8MPS7 323 aa15.14■□□□□ 0.01
HLA-DOA-206ENST00000495532 PRKAR2BP31323 418 aa15.14■□□□□ 0.01
HLA-DOA-206ENST00000495532 TNIP1Q15025 636 aa15.14■□□□□ 0.01
HLA-DOA-206ENST00000495532 TTLL7Q6ZT98 887 aa15.14■□□□□ 0.01
HLA-DOA-206ENST00000495532 MCM10Q7L590 875 aa15.14■□□□□ 0.01
HLA-DOA-206ENST00000495532 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
HLA-DOA-206ENST00000495532 CSRNP1Q96S65 589 aa15.14■□□□□ 0.01
HLA-DOA-206ENST00000495532 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
HLA-DOA-206ENST00000495532 LRRC37AA6NMS7 1700 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms