RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 CEP85Q6P2H3 762 aa19.67■□□□□ 0.74
PHF1-211ENST00000495509 CLEC4GQ6UXB4 293 aa19.67■□□□□ 0.74
PHF1-211ENST00000495509 SYNE4Q8N205 404 aa19.67■□□□□ 0.74
PHF1-211ENST00000495509 ANO8Q9HCE9 1232 aaPredicted RBP19.67■□□□□ 0.74
PHF1-211ENST00000495509 USP42Q9H9J4 1324 aaKnown RBP19.66■□□□□ 0.74
PHF1-211ENST00000495509 IBTKQ9P2D0 1353 aaPredicted RBP19.66■□□□□ 0.74
PHF1-211ENST00000495509 ADRA2BP18089 450 aa19.66■□□□□ 0.74
PHF1-211ENST00000495509 HMGB2P26583 209 aaKnown RBP19.66■□□□□ 0.74
PHF1-211ENST00000495509 CASP7P55210 303 aa19.66■□□□□ 0.74
PHF1-211ENST00000495509 CCDC125Q86Z20 511 aa19.66■□□□□ 0.74
PHF1-211ENST00000495509 NIP7Q9Y221 180 aaKnown RBP eCLIP19.66■□□□□ 0.74
PHF1-211ENST00000495509 TBC1D9BQ66K14 1250 aa19.65■□□□□ 0.74
PHF1-211ENST00000495509 BICDL1Q6ZP65 573 aa19.65■□□□□ 0.74
PHF1-211ENST00000495509 ANKRD44Q8N8A2 993 aa19.65■□□□□ 0.74
PHF1-211ENST00000495509 ZNF652Q9Y2D9 606 aa19.65■□□□□ 0.74
PHF1-211ENST00000495509 TUBGCP6Q96RT7 1819 aa19.65■□□□□ 0.74
PHF1-211ENST00000495509 FAM177BA6PVY3 158 aa19.65■□□□□ 0.74
PHF1-211ENST00000495509 EPHA10Q5JZY3 1008 aa19.65■□□□□ 0.74
PHF1-211ENST00000495509 SUSD4Q5VX71 490 aa19.65■□□□□ 0.74
PHF1-211ENST00000495509 FAM89AQ96GI7 184 aa19.65■□□□□ 0.74
PHF1-211ENST00000495509 KDM2BQ8NHM5 1336 aa19.64■□□□□ 0.74
PHF1-211ENST00000495509 COL23A1Q86Y22 540 aaPredicted RBP19.64■□□□□ 0.73
PHF1-211ENST00000495509 RPAP2Q8IXW5 612 aaPredicted RBP19.64■□□□□ 0.73
PHF1-211ENST00000495509 RWDD1Q9H446 243 aaPredicted RBP19.64■□□□□ 0.73
PHF1-211ENST00000495509 SCN7AQ01118 1682 aa19.63■□□□□ 0.73
PHF1-211ENST00000495509 PNMA6EA0A0J9YXQ4 647 aa19.63■□□□□ 0.73
PHF1-211ENST00000495509 HDAC1Q13547 482 aaPredicted RBP19.63■□□□□ 0.73
PHF1-211ENST00000495509 BICC1Q9H694 974 aaKnown RBP19.63■□□□□ 0.73
PHF1-211ENST00000495509 PCCAP05165 728 aaPredicted RBP19.62■□□□□ 0.73
PHF1-211ENST00000495509 ATP8B2P98198 1209 aa19.62■□□□□ 0.73
PHF1-211ENST00000495509 ZBTB38Q8NAP3 1195 aaPredicted RBP19.62■□□□□ 0.73
PHF1-211ENST00000495509 UPF1Q92900 1129 aaKnown RBP eCLIP19.62■□□□□ 0.737e-8■■■□□ 14.7
PHF1-211ENST00000495509 TRMT112Q9UI30 125 aaKnown RBP19.62■□□□□ 0.73
PHF1-211ENST00000495509 GYS1P13807 737 aa19.62■□□□□ 0.73
PHF1-211ENST00000495509 SLC15A2Q16348 729 aa19.62■□□□□ 0.73
PHF1-211ENST00000495509 PNPLA7Q6ZV29 1317 aa19.62■□□□□ 0.73
PHF1-211ENST00000495509 RGL2O15211 777 aa19.61■□□□□ 0.73
PHF1-211ENST00000495509 MSH5O43196 834 aa19.61■□□□□ 0.73
PHF1-211ENST00000495509 PPP1R42Q7Z4L9 355 aa19.61■□□□□ 0.73
PHF1-211ENST00000495509 FOXO4P98177 505 aa19.6■□□□□ 0.73
PHF1-211ENST00000495509 PARP10Q53GL7 1025 aa19.6■□□□□ 0.73
PHF1-211ENST00000495509 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
PHF1-211ENST00000495509 UTP14AQ9BVJ6 771 aaKnown RBP19.6■□□□□ 0.73
PHF1-211ENST00000495509 STK32BQ9NY57 414 aa19.6■□□□□ 0.73
PHF1-211ENST00000495509 NUTM1Q86Y26 1132 aa19.59■□□□□ 0.73
PHF1-211ENST00000495509 SETDB2Q96T68 719 aa19.59■□□□□ 0.73
PHF1-211ENST00000495509 HDAC5Q9UQL6 1122 aa19.59■□□□□ 0.73
PHF1-211ENST00000495509 SRGAP3O43295 1099 aa19.58■□□□□ 0.73
PHF1-211ENST00000495509 NTSR2O95665 410 aa19.58■□□□□ 0.73
PHF1-211ENST00000495509 NFIXQ14938 502 aa19.58■□□□□ 0.73
PHF1-211ENST00000495509 ILDR2Q71H61 639 aa19.58■□□□□ 0.73
PHF1-211ENST00000495509 FLAD1Q8NFF5 587 aa19.57■□□□□ 0.72
PHF1-211ENST00000495509 IRS4O14654 1257 aaPredicted RBP19.57■□□□□ 0.72
PHF1-211ENST00000495509 MTX1Q13505 466 aa19.57■□□□□ 0.72
PHF1-211ENST00000495509 POLA2Q14181 598 aa19.57■□□□□ 0.72
PHF1-211ENST00000495509 LMBR1LQ6UX01 489 aa19.57■□□□□ 0.72
PHF1-211ENST00000495509 SKAP1Q86WV1 359 aa19.57■□□□□ 0.72
PHF1-211ENST00000495509 SSH3Q8TE77 659 aa19.57■□□□□ 0.72
PHF1-211ENST00000495509 HCLS1P14317 486 aaPredicted RBP19.56■□□□□ 0.72
PHF1-211ENST00000495509 RABL6Q3YEC7 729 aaPredicted RBP19.56■□□□□ 0.72
PHF1-211ENST00000495509 SH3TC1Q8TE82 1336 aa19.55■□□□□ 0.72
PHF1-211ENST00000495509 CDHR2Q9BYE9 1310 aa19.55■□□□□ 0.72
PHF1-211ENST00000495509 SMC5Q8IY18 1101 aa19.55■□□□□ 0.72
PHF1-211ENST00000495509 PDGFDQ9GZP0 370 aaPredicted RBP19.55■□□□□ 0.72
PHF1-211ENST00000495509 DCTPP1Q9H773 170 aa19.55■□□□□ 0.72
PHF1-211ENST00000495509 HMMRO75330 724 aa19.55■□□□□ 0.72
PHF1-211ENST00000495509 TM4SF1P30408 202 aa19.55■□□□□ 0.72
PHF1-211ENST00000495509 ERFEQ4G0M1 354 aa19.55■□□□□ 0.72
PHF1-211ENST00000495509 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
PHF1-211ENST00000495509 CCDC24Q8N4L8 307 aa19.55■□□□□ 0.72
PHF1-211ENST00000495509 NBPF5PQ86XG9 351 aaPredicted RBP19.54■□□□□ 0.72
PHF1-211ENST00000495509 CCDC85AQ96PX6 553 aaPredicted RBP19.54■□□□□ 0.72
PHF1-211ENST00000495509 PLA2G12BQ9BX93 195 aa19.54■□□□□ 0.72
PHF1-211ENST00000495509 PA2G4Q9UQ80 394 aaKnown RBP19.53■□□□□ 0.72
PHF1-211ENST00000495509 MSL1Q68DK7 614 aa19.52■□□□□ 0.72
PHF1-211ENST00000495509 KLHDC4Q8TBB5 520 aa19.52■□□□□ 0.72
PHF1-211ENST00000495509 EXOC6BQ9Y2D4 811 aa19.52■□□□□ 0.72
PHF1-211ENST00000495509 CHMP3Q9Y3E7 222 aa19.52■□□□□ 0.72
PHF1-211ENST00000495509 COL24A1Q17RW2 1714 aa19.52■□□□□ 0.72
PHF1-211ENST00000495509 APBB1O00213 710 aa19.52■□□□□ 0.71
PHF1-211ENST00000495509 PDE8AO60658 829 aa19.52■□□□□ 0.71
PHF1-211ENST00000495509 CSF1RP07333 972 aa19.52■□□□□ 0.71
PHF1-211ENST00000495509 DDR1Q08345 913 aa19.52■□□□□ 0.71
PHF1-211ENST00000495509 TTLL11Q8NHH1 800 aa19.52■□□□□ 0.71
PHF1-211ENST00000495509 PDZRN3Q9UPQ7 1066 aa19.52■□□□□ 0.71
PHF1-211ENST00000495509 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
PHF1-211ENST00000495509 TPTE2Q6XPS3 522 aa19.51■□□□□ 0.71
PHF1-211ENST00000495509 NLGN1Q8N2Q7 840 aa19.51■□□□□ 0.71
PHF1-211ENST00000495509 GCC1Q96CN9 775 aa19.51■□□□□ 0.71
PHF1-211ENST00000495509 CARMIL3Q8ND23 1372 aa19.51■□□□□ 0.71
PHF1-211ENST00000495509 MYH3P11055 1940 aa19.51■□□□□ 0.71
PHF1-211ENST00000495509 DDX60Q8IY21 1712 aaKnown RBP19.51■□□□□ 0.71
PHF1-211ENST00000495509 SURF6O75683 361 aaKnown RBP19.5■□□□□ 0.71
PHF1-211ENST00000495509 RFX5P48382 616 aaPredicted RBP19.5■□□□□ 0.71
PHF1-211ENST00000495509 CTSWP56202 376 aa19.5■□□□□ 0.71
PHF1-211ENST00000495509 C3orf67Q6ZVT6 689 aa19.5■□□□□ 0.71
PHF1-211ENST00000495509 NYXQ9GZU5 481 aa19.5■□□□□ 0.71
PHF1-211ENST00000495509 ABCC12Q96J65 1359 aa19.5■□□□□ 0.71
PHF1-211ENST00000495509 QSER1Q2KHR3 1735 aa19.5■□□□□ 0.71
PHF1-211ENST00000495509 POLRMTO00411 1230 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms