RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 PLBD2Q8NHP8 589 aa20.24■□□□□ 0.83
LIMS2-216ENST00000494613 TAOK3Q9H2K8 898 aa20.24■□□□□ 0.83
LIMS2-216ENST00000494613 LTBP3Q9NS15 1303 aa20.24■□□□□ 0.83
LIMS2-216ENST00000494613 ABCC12Q96J65 1359 aa20.23■□□□□ 0.83
LIMS2-216ENST00000494613 CCDC27Q2M243 656 aa20.23■□□□□ 0.83
LIMS2-216ENST00000494613 NLRP3Q96P20 1036 aa20.23■□□□□ 0.83
LIMS2-216ENST00000494613 ZC3H4Q9UPT8 1303 aaKnown RBP20.23■□□□□ 0.83
LIMS2-216ENST00000494613 CCDC93Q567U6 631 aa20.22■□□□□ 0.83
LIMS2-216ENST00000494613 DPY19L2Q6NUT2 758 aa20.22■□□□□ 0.83
LIMS2-216ENST00000494613 C3orf67Q6ZVT6 689 aa20.22■□□□□ 0.83
LIMS2-216ENST00000494613 SYNE4Q8N205 404 aa20.22■□□□□ 0.83
LIMS2-216ENST00000494613 RPGRQ92834 1020 aaKnown RBP20.22■□□□□ 0.83
LIMS2-216ENST00000494613 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-216ENST00000494613 IBTKQ9P2D0 1353 aaPredicted RBP20.21■□□□□ 0.83
LIMS2-216ENST00000494613 RTKN2Q8IZC4 609 aa20.21■□□□□ 0.83
LIMS2-216ENST00000494613 RBM17Q96I25 401 aaKnown RBP20.21■□□□□ 0.83
LIMS2-216ENST00000494613 CRAMP1Q96RY5 1269 aa20.21■□□□□ 0.83
LIMS2-216ENST00000494613 TRMT112Q9UI30 125 aaKnown RBP20.21■□□□□ 0.83
LIMS2-216ENST00000494613 NCBP3Q53F19 620 aaKnown RBP20.2■□□□□ 0.82
LIMS2-216ENST00000494613 C16orf71Q8IYS4 520 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-216ENST00000494613 TSPYL6Q8N831 410 aa20.2■□□□□ 0.82
LIMS2-216ENST00000494613 ZNF428Q96B54 188 aa20.2■□□□□ 0.82
LIMS2-216ENST00000494613 PHAXQ9H814 394 aaKnown RBP20.2■□□□□ 0.82
LIMS2-216ENST00000494613 HCLS1P14317 486 aaPredicted RBP20.19■□□□□ 0.82
LIMS2-216ENST00000494613 VEGFAP15692 232 aaPredicted RBP20.19■□□□□ 0.82
LIMS2-216ENST00000494613 HSPA6P17066 643 aa20.19■□□□□ 0.82
LIMS2-216ENST00000494613 FKBP4Q02790 459 aaKnown RBP eCLIP20.19■□□□□ 0.82
LIMS2-216ENST00000494613 TSR2Q969E8 191 aaKnown RBP20.19■□□□□ 0.82
LIMS2-216ENST00000494613 SALL2Q9Y467 1007 aaPredicted RBP20.19■□□□□ 0.82
LIMS2-216ENST00000494613 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
LIMS2-216ENST00000494613 ISCA1Q9BUE6 129 aa20.18■□□□□ 0.82
LIMS2-216ENST00000494613 ZNF277Q9NRM2 450 aaPredicted RBP20.18■□□□□ 0.82
LIMS2-216ENST00000494613 CCDC88AQ3V6T2 1871 aa20.18■□□□□ 0.82
LIMS2-216ENST00000494613 POTECB2RU33 542 aa20.17■□□□□ 0.82
LIMS2-216ENST00000494613 TCERG1O14776 1098 aaKnown RBP20.17■□□□□ 0.82
LIMS2-216ENST00000494613 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
LIMS2-216ENST00000494613 CC2D2BQ6DHV5 1058 aa20.17■□□□□ 0.82
LIMS2-216ENST00000494613 RIC3Q7Z5B4 369 aa20.17■□□□□ 0.82
LIMS2-216ENST00000494613 RBM46Q8TBY0 533 aaKnown RBP20.17■□□□□ 0.82
LIMS2-216ENST00000494613 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
LIMS2-216ENST00000494613 FER1L6Q2WGJ9 1857 aa20.17■□□□□ 0.82
LIMS2-216ENST00000494613 TRIM28Q13263 835 aaKnown RBP20.16■□□□□ 0.82
LIMS2-216ENST00000494613 FAM9BQ8IZU0 186 aa20.16■□□□□ 0.82
LIMS2-216ENST00000494613 RNF123Q5XPI4 1314 aa20.16■□□□□ 0.82
LIMS2-216ENST00000494613 RIC1Q4ADV7 1423 aa20.16■□□□□ 0.82
LIMS2-216ENST00000494613 DDNO94850 711 aaPredicted RBP20.15■□□□□ 0.82
LIMS2-216ENST00000494613 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
LIMS2-216ENST00000494613 SH3TC1Q8TE82 1336 aa20.15■□□□□ 0.82
LIMS2-216ENST00000494613 IL16Q14005 1332 aa20.14■□□□□ 0.81
LIMS2-216ENST00000494613 BBOX1O75936 387 aa20.13■□□□□ 0.81
LIMS2-216ENST00000494613 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
LIMS2-216ENST00000494613 GRIPAP1Q4V328 841 aa20.13■□□□□ 0.81
LIMS2-216ENST00000494613 WDR63Q8IWG1 891 aa20.13■□□□□ 0.81
LIMS2-216ENST00000494613 PSMD1Q99460 953 aa20.13■□□□□ 0.81
LIMS2-216ENST00000494613 CACNA1SQ13698 1873 aa20.12■□□□□ 0.81
LIMS2-216ENST00000494613 PPEF1O14829 653 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-216ENST00000494613 IARSP41252 1262 aaKnown RBP20.12■□□□□ 0.81
LIMS2-216ENST00000494613 FSTL1Q12841 308 aa20.12■□□□□ 0.81
LIMS2-216ENST00000494613 RTL5Q5HYW3 569 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-216ENST00000494613 SLC51AQ86UW1 340 aa20.12■□□□□ 0.81
LIMS2-216ENST00000494613 TNRC6CQ9HCJ0 1690 aaKnown RBP20.12■□□□□ 0.81
LIMS2-216ENST00000494613 TWISTNBQ3B726 338 aaPredicted RBP20.11■□□□□ 0.81
LIMS2-216ENST00000494613 DDX46Q7L014 1031 aaKnown RBP20.11■□□□□ 0.81
LIMS2-216ENST00000494613 ATP6V0A2Q9Y487 856 aa20.11■□□□□ 0.81
LIMS2-216ENST00000494613 SP8Q8IXZ3 490 aa20.1■□□□□ 0.81
LIMS2-216ENST00000494613 MYD88Q99836 296 aa20.1■□□□□ 0.81
LIMS2-216ENST00000494613 TMX4Q9H1E5 349 aaPredicted RBP20.1■□□□□ 0.81
LIMS2-216ENST00000494613 ARFGEF2Q9Y6D5 1785 aa20.1■□□□□ 0.81
LIMS2-216ENST00000494613 ABCC4O15439 1325 aa20.09■□□□□ 0.81
LIMS2-216ENST00000494613 FZD9O00144 591 aa20.09■□□□□ 0.81
LIMS2-216ENST00000494613 DDX58O95786 925 aaKnown RBP20.09■□□□□ 0.81
LIMS2-216ENST00000494613 SLC4A2P04920 1241 aa20.09■□□□□ 0.81
LIMS2-216ENST00000494613 APLP1P51693 650 aa20.09■□□□□ 0.81
LIMS2-216ENST00000494613 METTL22Q9BUU2 404 aaPredicted RBP20.09■□□□□ 0.81
LIMS2-216ENST00000494613 SF3B3Q15393 1217 aaKnown RBP20.08■□□□□ 0.81
LIMS2-216ENST00000494613 ZBTB38Q8NAP3 1195 aaPredicted RBP20.08■□□□□ 0.81
LIMS2-216ENST00000494613 SMC1BQ8NDV3 1235 aa20.08■□□□□ 0.81
LIMS2-216ENST00000494613 JDP2Q8WYK2 163 aa20.08■□□□□ 0.81
LIMS2-216ENST00000494613 STK31Q9BXU1 1019 aa20.08■□□□□ 0.81
LIMS2-216ENST00000494613 DICER1Q9UPY3 1922 aaKnown RBP20.08■□□□□ 0.8
LIMS2-216ENST00000494613 PI4KAP2A4QPH2 592 aa20.07■□□□□ 0.8
LIMS2-216ENST00000494613 IRS4O14654 1257 aaPredicted RBP20.07■□□□□ 0.8
LIMS2-216ENST00000494613 VAMP4O75379 141 aa20.07■□□□□ 0.8
LIMS2-216ENST00000494613 GRAPQ13588 217 aa20.07■□□□□ 0.8
LIMS2-216ENST00000494613 KSR2Q6VAB6 950 aa20.07■□□□□ 0.8
LIMS2-216ENST00000494613 G2E3Q7L622 706 aa20.07■□□□□ 0.8
LIMS2-216ENST00000494613 PI4KAP1Q8N8J0 262 aa20.07■□□□□ 0.8
LIMS2-216ENST00000494613 CCDC191Q8NCU4 936 aa20.07■□□□□ 0.8
LIMS2-216ENST00000494613 GRAPLQ8TC17 118 aaPredicted RBP20.07■□□□□ 0.8
LIMS2-216ENST00000494613 SPINK5Q9NQ38 1064 aaPredicted RBP20.07■□□□□ 0.8
LIMS2-216ENST00000494613 MAP3K2Q9Y2U5 619 aa20.07■□□□□ 0.8
LIMS2-216ENST00000494613 SNED1Q8TER0 1413 aa20.07■□□□□ 0.8
LIMS2-216ENST00000494613 JARID2Q92833 1246 aaPredicted RBP20.06■□□□□ 0.8
LIMS2-216ENST00000494613 CEP350Q5VT06 3117 aa20.05■□□□□ 0.8
LIMS2-216ENST00000494613 EXOSC9Q06265 439 aaKnown RBP20.05■□□□□ 0.8
LIMS2-216ENST00000494613 LARGE2Q8N3Y3 721 aa20.05■□□□□ 0.8
LIMS2-216ENST00000494613 MPNDQ8N594 471 aa20.05■□□□□ 0.8
LIMS2-216ENST00000494613 DNAJC5GQ8N7S2 189 aa20.05■□□□□ 0.8
LIMS2-216ENST00000494613 L3MBTL3Q96JM7 780 aaPredicted RBP20.05■□□□□ 0.8
LIMS2-216ENST00000494613 ZNF541Q9H0D2 1346 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms