RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 GIGYF2Q6Y7W6 1299 aaKnown RBP8.44□□□□□ -1.06
MSH5-217ENST00000494458 MYD88Q99836 296 aa8.44□□□□□ -1.06
MSH5-217ENST00000494458 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
MSH5-217ENST00000494458 COPRSQ9NQ92 184 aa8.44□□□□□ -1.06
MSH5-217ENST00000494458 CREBZFQ9NS37 354 aa8.44□□□□□ -1.06
MSH5-217ENST00000494458 C9orf78Q9NZ63 289 aaPredicted RBP8.44□□□□□ -1.06
MSH5-217ENST00000494458 MAP3K15Q6ZN16 1313 aa8.44□□□□□ -1.06
MSH5-217ENST00000494458 USP42Q9H9J4 1324 aaKnown RBP8.44□□□□□ -1.06
MSH5-217ENST00000494458 SRGAP3O43295 1099 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 FOXO4P98177 505 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 ITPK1Q13572 414 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 HSP90AB4PQ58FF6 505 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 EPHA10Q5JZY3 1008 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 ZNF34Q8IZ26 560 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 LRRCC1Q9C099 1032 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 ZBTB1Q9Y2K1 713 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 AOX1Q06278 1338 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 PALLDQ8WX93 1383 aa8.43□□□□□ -1.06
MSH5-217ENST00000494458 CSF1RP07333 972 aa8.42□□□□□ -1.06
MSH5-217ENST00000494458 HSP90AB3PQ58FF7 597 aa8.42□□□□□ -1.06
MSH5-217ENST00000494458 C16orf71Q8IYS4 520 aaPredicted RBP8.42□□□□□ -1.06
MSH5-217ENST00000494458 RHPN1Q8TCX5 695 aa8.42□□□□□ -1.06
MSH5-217ENST00000494458 KIF1BPQ96EK5 621 aa8.42□□□□□ -1.06
MSH5-217ENST00000494458 ACSBG1Q96GR2 724 aa8.42□□□□□ -1.06
MSH5-217ENST00000494458 BICC1Q9H694 974 aaKnown RBP8.42□□□□□ -1.06
MSH5-217ENST00000494458 QTRT2Q9H974 415 aaKnown RBP8.42□□□□□ -1.06
MSH5-217ENST00000494458 CCDC87Q9NVE4 849 aa8.42□□□□□ -1.06
MSH5-217ENST00000494458 CWC25Q9NXE8 425 aaPredicted RBP8.42□□□□□ -1.06
MSH5-217ENST00000494458 CCDC9Q9Y3X0 531 aaKnown RBP8.42□□□□□ -1.06
MSH5-217ENST00000494458 NHSQ6T4R5 1651 aa8.42□□□□□ -1.06
MSH5-217ENST00000494458 COL5A3P25940 1745 aaPredicted RBP8.41□□□□□ -1.06
MSH5-217ENST00000494458 CDHR2Q9BYE9 1310 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 CNTNAP4Q9C0A0 1308 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 A0A087WZG4 1122 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 SEC24BO95487 1268 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 PCCAP05165 728 aaPredicted RBP8.41□□□□□ -1.06
MSH5-217ENST00000494458 GSPT1P15170 499 aaKnown RBP8.41□□□□□ -1.06
MSH5-217ENST00000494458 ATP6V1AP38606 617 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 CRKLP46109 303 aaKnown RBP8.41□□□□□ -1.06
MSH5-217ENST00000494458 PDE1AP54750 535 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 HLFQ16534 295 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 TTC22Q5TAA0 569 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 PTF1AQ7RTS3 328 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 SEPT12Q8IYM1 358 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 ZBTB38Q8NAP3 1195 aaPredicted RBP8.41□□□□□ -1.06
MSH5-217ENST00000494458 OTUD7AQ8TE49 926 aaPredicted RBP8.41□□□□□ -1.06
MSH5-217ENST00000494458 EXOC6BQ9Y2D4 811 aa8.41□□□□□ -1.06
MSH5-217ENST00000494458 ATP5J2-PTCD1G3V325 749 aa8.4□□□□□ -1.06
MSH5-217ENST00000494458 SMARCA5O60264 1052 aaPredicted RBP8.4□□□□□ -1.06
MSH5-217ENST00000494458 SURF6O75683 361 aaKnown RBP8.4□□□□□ -1.06
MSH5-217ENST00000494458 SASH1O94885 1247 aa8.4□□□□□ -1.06
MSH5-217ENST00000494458 CAMTA2O94983 1202 aa8.4□□□□□ -1.06
MSH5-217ENST00000494458 POTEJP0CG39 1038 aa8.4□□□□□ -1.06
MSH5-217ENST00000494458 PTPN12Q05209 780 aaKnown RBP8.4□□□□□ -1.06
MSH5-217ENST00000494458 CLEC4GQ6UXB4 293 aa8.4□□□□□ -1.06
MSH5-217ENST00000494458 NLRP10Q86W26 655 aa8.4□□□□□ -1.06
MSH5-217ENST00000494458 ERC1Q8IUD2 1116 aa8.4□□□□□ -1.06
MSH5-217ENST00000494458 SYTL4Q96C24 671 aaPredicted RBP8.4□□□□□ -1.06
MSH5-217ENST00000494458 AK7Q96M32 723 aa8.4□□□□□ -1.06
MSH5-217ENST00000494458 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.06
MSH5-217ENST00000494458 FBXO3Q9UK99 471 aa8.4□□□□□ -1.06
MSH5-217ENST00000494458 MYH14Q7Z406 1995 aaKnown RBP8.4□□□□□ -1.06
MSH5-217ENST00000494458 MEX3CQ5U5Q3 659 aaKnown RBP8.39□□□□□ -1.07
MSH5-217ENST00000494458 KIF6Q6ZMV9 814 aa8.39□□□□□ -1.07
MSH5-217ENST00000494458 UBE3BQ7Z3V4 1068 aa8.39□□□□□ -1.07
MSH5-217ENST00000494458 LINC00116Q8NCU8 138 aa8.39□□□□□ -1.07
MSH5-217ENST00000494458 ZBTB3Q9H5J0 574 aa8.39□□□□□ -1.07
MSH5-217ENST00000494458 SBF2Q86WG5 1849 aa8.38□□□□□ -1.07
MSH5-217ENST00000494458 LY75O60449 1722 aa8.38□□□□□ -1.07
MSH5-217ENST00000494458 TTC41PQ6P2S7 1318 aa8.38□□□□□ -1.07
MSH5-217ENST00000494458 RPS6KA4O75676 772 aa8.38□□□□□ -1.07
MSH5-217ENST00000494458 CIAO1O76071 339 aa8.38□□□□□ -1.07
MSH5-217ENST00000494458 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
MSH5-217ENST00000494458 ZNF772Q68DY9 489 aaPredicted RBP8.38□□□□□ -1.07
MSH5-217ENST00000494458 FAM196AQ6ZSG2 479 aa8.38□□□□□ -1.07
MSH5-217ENST00000494458 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
MSH5-217ENST00000494458 PI4K2BQ8TCG2 481 aa8.38□□□□□ -1.07
MSH5-217ENST00000494458 TBC1D32Q96NH3 1257 aa8.38□□□□□ -1.07
MSH5-217ENST00000494458 GPR108Q9NPR9 543 aa8.38□□□□□ -1.07
MSH5-217ENST00000494458 UBN2Q6ZU65 1347 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 EIF5BO60841 1220 aaKnown RBP8.37□□□□□ -1.07
MSH5-217ENST00000494458 SDSP20132 328 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 MX1P20591 662 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 RBM25P49756 843 aaKnown RBP8.37□□□□□ -1.07
MSH5-217ENST00000494458 RBM6P78332 1123 aaKnown RBP8.37□□□□□ -1.07
MSH5-217ENST00000494458 PARP10Q53GL7 1025 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 LMBR1LQ6UX01 489 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 TBC1D9Q6ZT07 1266 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 ATG9AQ7Z3C6 839 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 TICAM2Q86XR7 235 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 IL17RAQ96F46 866 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 PA2G4Q9UQ80 394 aaKnown RBP8.37□□□□□ -1.07
MSH5-217ENST00000494458 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.37□□□□□ -1.07
MSH5-217ENST00000494458 BTAF1O14981 1849 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 TUBGCP6Q96RT7 1819 aa8.37□□□□□ -1.07
MSH5-217ENST00000494458 NUP98P52948 1817 aa8.36□□□□□ -1.07
MSH5-217ENST00000494458 AFDNP55196 1824 aaKnown RBP8.36□□□□□ -1.07
MSH5-217ENST00000494458 ANKRD36CQ5JPF3 1778 aa8.36□□□□□ -1.07
MSH5-217ENST00000494458 EPB41L2O43491 1005 aaKnown RBP8.36□□□□□ -1.07
MSH5-217ENST00000494458 CDC45O75419 566 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms