RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
RN7SL538P-201ENST00000494227 FLAD1Q8NFF5 587 aa11.37□□□□□ -0.59
RN7SL538P-201ENST00000494227 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
RN7SL538P-201ENST00000494227 CHMP4AQ9BY43 222 aa11.37□□□□□ -0.59
RN7SL538P-201ENST00000494227 HYPKQ9NX55 129 aa11.37□□□□□ -0.59
RN7SL538P-201ENST00000494227 KDM2BQ8NHM5 1336 aa11.36□□□□□ -0.59
RN7SL538P-201ENST00000494227 A0A0G2JLW4 131 aa11.36□□□□□ -0.59
RN7SL538P-201ENST00000494227 PI4KAP2A4QPH2 592 aa11.36□□□□□ -0.59
RN7SL538P-201ENST00000494227 AIMP1Q12904 312 aaKnown RBP11.36□□□□□ -0.59
RN7SL538P-201ENST00000494227 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
RN7SL538P-201ENST00000494227 PI4KAP1Q8N8J0 262 aa11.36□□□□□ -0.59
RN7SL538P-201ENST00000494227 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
RN7SL538P-201ENST00000494227 AAMPQ13685 434 aa11.35□□□□□ -0.59
RN7SL538P-201ENST00000494227 KSR2Q6VAB6 950 aa11.35□□□□□ -0.59
RN7SL538P-201ENST00000494227 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
RN7SL538P-201ENST00000494227 C1orf115Q9H7X2 142 aa11.35□□□□□ -0.59
RN7SL538P-201ENST00000494227 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
RN7SL538P-201ENST00000494227 TOMM70O94826 608 aa11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 CYP19A1P11511 503 aaPredicted RBP11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 DPEP1P16444 411 aa11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 CCT4P50991 539 aaKnown RBP11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 BEND3Q5T5X7 828 aa11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 SKAP1Q86WV1 359 aa11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 DNAAF4Q8WXU2 420 aa11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 SMARCC1Q92922 1105 aaPredicted RBP11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 MEIS3Q99687 375 aa11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 MAP3K2Q9Y2U5 619 aa11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 AFDNP55196 1824 aaKnown RBP11.34□□□□□ -0.59
RN7SL538P-201ENST00000494227 TTLL7Q6ZT98 887 aa11.33□□□□□ -0.6
RN7SL538P-201ENST00000494227 SIRT2Q8IXJ6 389 aa11.33□□□□□ -0.6
RN7SL538P-201ENST00000494227 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
RN7SL538P-201ENST00000494227 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
RN7SL538P-201ENST00000494227 KCNA3P22001 575 aa11.32□□□□□ -0.6
RN7SL538P-201ENST00000494227 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
RN7SL538P-201ENST00000494227 C9orf131Q5VYM1 1079 aa11.32□□□□□ -0.6
RN7SL538P-201ENST00000494227 KLRG1Q96E93 195 aa11.32□□□□□ -0.6
RN7SL538P-201ENST00000494227 USP44Q9H0E7 712 aa11.32□□□□□ -0.6
RN7SL538P-201ENST00000494227 VIRMAQ69YN4 1812 aaKnown RBP11.32□□□□□ -0.6
RN7SL538P-201ENST00000494227 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
RN7SL538P-201ENST00000494227 COL11A2P13942 1736 aaPredicted RBP11.32□□□□□ -0.6
RN7SL538P-201ENST00000494227 IGKV5-2P06315 115 aa11.31□□□□□ -0.6
RN7SL538P-201ENST00000494227 GYS1P13807 737 aa11.31□□□□□ -0.6
RN7SL538P-201ENST00000494227 DDR1Q08345 913 aa11.31□□□□□ -0.6
RN7SL538P-201ENST00000494227 INTS5Q6P9B9 1019 aaKnown RBP11.31□□□□□ -0.6
RN7SL538P-201ENST00000494227 ANKRD13DQ6ZTN6 518 aa11.31□□□□□ -0.6
RN7SL538P-201ENST00000494227 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
RN7SL538P-201ENST00000494227 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
RN7SL538P-201ENST00000494227 SRCIN1Q9C0H9 1055 aa11.31□□□□□ -0.6
RN7SL538P-201ENST00000494227 CCDC88AQ3V6T2 1871 aa11.3□□□□□ -0.6
RN7SL538P-201ENST00000494227 STARD3NLO95772 234 aa11.3□□□□□ -0.6
RN7SL538P-201ENST00000494227 CWF19L2Q2TBE0 894 aaKnown RBP11.3□□□□□ -0.6
RN7SL538P-201ENST00000494227 CENPQQ7L2Z9 268 aaPredicted RBP11.3□□□□□ -0.6
RN7SL538P-201ENST00000494227 METTL22Q9BUU2 404 aaPredicted RBP11.3□□□□□ -0.6
RN7SL538P-201ENST00000494227 RWDD1Q9H446 243 aaPredicted RBP11.3□□□□□ -0.6
RN7SL538P-201ENST00000494227 SRP68Q9UHB9 627 aaKnown RBP11.3□□□□□ -0.6
RN7SL538P-201ENST00000494227 ZBTB1Q9Y2K1 713 aa11.3□□□□□ -0.6
RN7SL538P-201ENST00000494227 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 ALDH1L1O75891 902 aa11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 DDX58O95786 925 aaKnown RBP11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 RASSF7Q02833 373 aa11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 HDAC1Q13547 482 aaPredicted RBP11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 RBM46Q8TBY0 533 aaKnown RBP11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 MYD88Q99836 296 aa11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
RN7SL538P-201ENST00000494227 UBR2Q8IWV8 1755 aa11.28□□□□□ -0.6
RN7SL538P-201ENST00000494227 ANKRD31Q8N7Z5 1873 aa11.28□□□□□ -0.6
RN7SL538P-201ENST00000494227 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
RN7SL538P-201ENST00000494227 CHRNA5P30532 468 aa11.28□□□□□ -0.6
RN7SL538P-201ENST00000494227 PRELPP51888 382 aa11.28□□□□□ -0.6
RN7SL538P-201ENST00000494227 LINS1Q8NG48 757 aa11.28□□□□□ -0.6
RN7SL538P-201ENST00000494227 PLBD2Q8NHP8 589 aa11.28□□□□□ -0.6
RN7SL538P-201ENST00000494227 CNTNAP4Q9C0A0 1308 aa11.28□□□□□ -0.6
RN7SL538P-201ENST00000494227 NEURL1BA8MQ27 555 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 CRKLP46109 303 aaKnown RBP11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 TGFB2P61812 414 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 ANKRD44Q8N8A2 993 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 ZBTB3Q9H5J0 574 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 CCDC87Q9NVE4 849 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 RNF181Q9P0P0 153 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 RTCBQ9Y3I0 505 aaKnown RBP11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 LRRFIP2Q9Y608 721 aaKnown RBP11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 CACNA1SQ13698 1873 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 CARMIL3Q8ND23 1372 aa11.27□□□□□ -0.61
RN7SL538P-201ENST00000494227 GNAI2P04899 355 aa11.26□□□□□ -0.61
RN7SL538P-201ENST00000494227 GNAI3P08754 354 aa11.26□□□□□ -0.61
RN7SL538P-201ENST00000494227 EIF5P55010 431 aaKnown RBP11.26□□□□□ -0.61
RN7SL538P-201ENST00000494227 HLFQ16534 295 aa11.26□□□□□ -0.61
RN7SL538P-201ENST00000494227 SMC5Q8IY18 1101 aa11.26□□□□□ -0.61
RN7SL538P-201ENST00000494227 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
RN7SL538P-201ENST00000494227 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 IL6STP40189 918 aaPredicted RBP11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 ATP8B2P98198 1209 aa11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 GCKRQ14397 625 aa11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 TRAPPC3LQ5T215 181 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms