RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 NOL7Q9UMY1 257 aaKnown RBP13.81□□□□□ -0.2
RFC4-214ENST00000494047 ZNF500O60304 480 aaPredicted RBP13.8□□□□□ -0.2
RFC4-214ENST00000494047 TRIM37O94972 964 aa13.8□□□□□ -0.2
RFC4-214ENST00000494047 ZKSCAN1P17029 563 aaPredicted RBP13.8□□□□□ -0.2
RFC4-214ENST00000494047 PSMA5P28066 241 aa13.8□□□□□ -0.2
RFC4-214ENST00000494047 BEND3Q5T5X7 828 aa13.8□□□□□ -0.2
RFC4-214ENST00000494047 DEFB132Q7Z7B7 95 aa13.8□□□□□ -0.2
RFC4-214ENST00000494047 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
RFC4-214ENST00000494047 ARXQ96QS3 562 aa13.8□□□□□ -0.2
RFC4-214ENST00000494047 ANO8Q9HCE9 1232 aaPredicted RBP13.8□□□□□ -0.2
RFC4-214ENST00000494047 MIS18AQ9NYP9 233 aa13.8□□□□□ -0.2
RFC4-214ENST00000494047 LIMCH1Q9UPQ0 1083 aa13.8□□□□□ -0.2
RFC4-214ENST00000494047 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
RFC4-214ENST00000494047 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
RFC4-214ENST00000494047 TNS1Q9HBL0 1735 aaKnown RBP13.79□□□□□ -0.2
RFC4-214ENST00000494047 PDCP20941 246 aa13.79□□□□□ -0.2
RFC4-214ENST00000494047 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
RFC4-214ENST00000494047 RNF20Q5VTR2 975 aa13.79□□□□□ -0.2
RFC4-214ENST00000494047 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
RFC4-214ENST00000494047 ZGPATQ8N5A5 531 aaKnown RBP13.79□□□□□ -0.2
RFC4-214ENST00000494047 PI4K2BQ8TCG2 481 aa13.79□□□□□ -0.2
RFC4-214ENST00000494047 EVI5LQ96CN4 794 aa13.79□□□□□ -0.2
RFC4-214ENST00000494047 LTV1Q96GA3 475 aaPredicted RBP13.79□□□□□ -0.2
RFC4-214ENST00000494047 TSPY26PQ9H489 355 aa13.79□□□□□ -0.2
RFC4-214ENST00000494047 UTYO14607 1347 aa13.79□□□□□ -0.2
RFC4-214ENST00000494047 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
RFC4-214ENST00000494047 COL15A1P39059 1388 aa13.78□□□□□ -0.2
RFC4-214ENST00000494047 BTBD11A6QL63 1104 aa13.78□□□□□ -0.2
RFC4-214ENST00000494047 APBA3O96018 575 aa13.78□□□□□ -0.2
RFC4-214ENST00000494047 TPM3P06753 285 aa13.78□□□□□ -0.2
RFC4-214ENST00000494047 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
RFC4-214ENST00000494047 MARCH10Q8NA82 808 aaPredicted RBP13.78□□□□□ -0.2
RFC4-214ENST00000494047 MAP7D2Q96T17 732 aa13.78□□□□□ -0.2
RFC4-214ENST00000494047 ECHDC1Q9NTX5 307 aa13.78□□□□□ -0.2
RFC4-214ENST00000494047 HMG20BQ9P0W2 317 aa13.78□□□□□ -0.2
RFC4-214ENST00000494047 SBF2Q86WG5 1849 aa13.78□□□□□ -0.2
RFC4-214ENST00000494047 MRC1P22897 1456 aa13.78□□□□□ -0.2
RFC4-214ENST00000494047 OFD1O75665 1012 aa13.77□□□□□ -0.21
RFC4-214ENST00000494047 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.21
RFC4-214ENST00000494047 ZNF530Q6P9A1 599 aaPredicted RBP13.77□□□□□ -0.21
RFC4-214ENST00000494047 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
RFC4-214ENST00000494047 LINS1Q8NG48 757 aa13.77□□□□□ -0.21
RFC4-214ENST00000494047 KCNB2Q92953 911 aa13.77□□□□□ -0.21
RFC4-214ENST00000494047 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
RFC4-214ENST00000494047 SNRKQ9NRH2 765 aa13.77□□□□□ -0.21
RFC4-214ENST00000494047 ZDHHC9Q9Y397 364 aa13.77□□□□□ -0.21
RFC4-214ENST00000494047 IFIT2P09913 472 aaKnown RBP13.76□□□□□ -0.21
RFC4-214ENST00000494047 UBE2HP62256 183 aa13.76□□□□□ -0.21
RFC4-214ENST00000494047 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
RFC4-214ENST00000494047 GPT2Q8TD30 523 aa13.76□□□□□ -0.21
RFC4-214ENST00000494047 ALDH8A1Q9H2A2 487 aaPredicted RBP13.76□□□□□ -0.21
RFC4-214ENST00000494047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.214e-6■■□□□ 12.1
RFC4-214ENST00000494047 C9orf78Q9NZ63 289 aaPredicted RBP13.76□□□□□ -0.21
RFC4-214ENST00000494047 KAT6BQ8WYB5 2073 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 PLSCR1O15162 318 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 NEXNQ0ZGT2 675 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 KRT32Q14532 448 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 TTC14Q96N46 770 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 CAMKK2Q96RR4 588 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 LSG1Q9H089 658 aaKnown RBP13.75□□□□□ -0.21
RFC4-214ENST00000494047 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 CYP46A1Q9Y6A2 500 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 RGPD3A6NKT7 1758 aaPredicted RBP13.75□□□□□ -0.21
RFC4-214ENST00000494047 RGPD4Q7Z3J3 1758 aa13.75□□□□□ -0.21
RFC4-214ENST00000494047 PI4KAP2A4QPH2 592 aa13.74□□□□□ -0.21
RFC4-214ENST00000494047 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
RFC4-214ENST00000494047 ZSCAN22P10073 491 aaPredicted RBP13.74□□□□□ -0.21
RFC4-214ENST00000494047 PI4KAP1Q8N8J0 262 aa13.74□□□□□ -0.21
RFC4-214ENST00000494047 RAPGEF4Q8WZA2 1011 aa13.74□□□□□ -0.21
RFC4-214ENST00000494047 CHPF2Q9P2E5 772 aa13.74□□□□□ -0.21
RFC4-214ENST00000494047 ADCY9O60503 1353 aa13.74□□□□□ -0.21
RFC4-214ENST00000494047 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
RFC4-214ENST00000494047 SCN11AQ9UI33 1791 aa13.73□□□□□ -0.21
RFC4-214ENST00000494047 STX6O43752 255 aa13.73□□□□□ -0.21
RFC4-214ENST00000494047 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
RFC4-214ENST00000494047 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
RFC4-214ENST00000494047 DDX21Q9NR30 783 aaKnown RBP eCLIP13.73□□□□□ -0.21
RFC4-214ENST00000494047 SNX14Q9Y5W7 946 aa13.73□□□□□ -0.21
RFC4-214ENST00000494047 RPAP1Q9BWH6 1393 aaPredicted RBP13.73□□□□□ -0.21
RFC4-214ENST00000494047 TATP17735 454 aaPredicted RBP13.72□□□□□ -0.21
RFC4-214ENST00000494047 PRIM1P49642 420 aaKnown RBP13.72□□□□□ -0.21
RFC4-214ENST00000494047 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
RFC4-214ENST00000494047 EZH2Q15910 746 aaKnown RBP13.72□□□□□ -0.21
RFC4-214ENST00000494047 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
RFC4-214ENST00000494047 TMEM63CQ9P1W3 806 aa13.72□□□□□ -0.21
RFC4-214ENST00000494047 PALD1Q9ULE6 856 aa13.72□□□□□ -0.21
RFC4-214ENST00000494047 SYCE3A1L190 88 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 LAMB4A4D0S4 1761 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 GRM8O00222 908 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 GIGYF1O75420 1035 aaPredicted RBP13.71□□□□□ -0.21
RFC4-214ENST00000494047 ELP1O95163 1332 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 CAVIN2O95810 425 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 PKP1Q13835 747 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 ERBB4Q15303 1308 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 NBPF14Q5TI25 921 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 PHAXQ9H814 394 aaKnown RBP13.71□□□□□ -0.21
RFC4-214ENST00000494047 ZSWIM6Q9HCJ5 1215 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 IL1RAPL2Q9NP60 686 aa13.71□□□□□ -0.21
RFC4-214ENST00000494047 KIF3AQ9Y496 699 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms