RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-208ENST00000494028 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
CLCN6-208ENST00000494028 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
CLCN6-208ENST00000494028 TRIM6-TRIM34B2RNG4 842 aa13.03□□□□□ -0.32
CLCN6-208ENST00000494028 RABEP1Q15276 862 aa13.03□□□□□ -0.32
CLCN6-208ENST00000494028 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
CLCN6-208ENST00000494028 RILPL2Q969X0 211 aa13.03□□□□□ -0.32
CLCN6-208ENST00000494028 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-208ENST00000494028 SBF2Q86WG5 1849 aa13.02□□□□□ -0.32
CLCN6-208ENST00000494028 GLRX3O76003 335 aaKnown RBP13.02□□□□□ -0.33
CLCN6-208ENST00000494028 FOXO4P98177 505 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 RTL5Q5HYW3 569 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-208ENST00000494028 AACSQ86V21 672 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 KLHDC4Q8TBB5 520 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
CLCN6-208ENST00000494028 SIL1Q9H173 461 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 IL25Q9H293 177 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 TLR7Q9NYK1 1049 aaKnown RBP13.02□□□□□ -0.33
CLCN6-208ENST00000494028 MAP3K15Q6ZN16 1313 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 LY75O60449 1722 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.33
CLCN6-208ENST00000494028 MAP4K4O95819 1239 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-208ENST00000494028 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-208ENST00000494028 PTPN12Q05209 780 aaKnown RBP13.01□□□□□ -0.33
CLCN6-208ENST00000494028 G3BP1Q13283 466 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLCN6-208ENST00000494028 NFKBIBQ15653 356 aa13.01□□□□□ -0.33
CLCN6-208ENST00000494028 DDB1Q16531 1140 aa13.01□□□□□ -0.33
CLCN6-208ENST00000494028 KIF6Q6ZMV9 814 aa13.01□□□□□ -0.33
CLCN6-208ENST00000494028 CNTROBQ8N137 903 aa13.01□□□□□ -0.33
CLCN6-208ENST00000494028 EAF2Q96CJ1 260 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-208ENST00000494028 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
CLCN6-208ENST00000494028 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
CLCN6-208ENST00000494028 TAF1LQ8IZX4 1826 aa13.01□□□□□ -0.33
CLCN6-208ENST00000494028 MYH7P12883 1935 aa13□□□□□ -0.33
CLCN6-208ENST00000494028 RFX7Q2KHR2 1363 aa13□□□□□ -0.33
CLCN6-208ENST00000494028 RAD50Q92878 1312 aa13□□□□□ -0.33
CLCN6-208ENST00000494028 K7ELQ4 463 aaPredicted RBP13□□□□□ -0.33
CLCN6-208ENST00000494028 STARD3NLO95772 234 aa13□□□□□ -0.33
CLCN6-208ENST00000494028 IFIT2P09913 472 aaKnown RBP13□□□□□ -0.33
CLCN6-208ENST00000494028 DDIT3P35638 169 aa13□□□□□ -0.33
CLCN6-208ENST00000494028 MARCH10Q8NA82 808 aaPredicted RBP13□□□□□ -0.33
CLCN6-208ENST00000494028 IL17RAQ96F46 866 aa13□□□□□ -0.33
CLCN6-208ENST00000494028 PALLDQ8WX93 1383 aa12.99□□□□□ -0.33
CLCN6-208ENST00000494028 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
CLCN6-208ENST00000494028 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
CLCN6-208ENST00000494028 FNBP4Q8N3X1 1017 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-208ENST00000494028 C4AP0C0L4 1744 aa12.99□□□□□ -0.33
CLCN6-208ENST00000494028 C4BP0C0L5 1744 aa12.99□□□□□ -0.33
CLCN6-208ENST00000494028 SGSM2O43147 1006 aa12.98□□□□□ -0.33
CLCN6-208ENST00000494028 EPB41L2O43491 1005 aaKnown RBP12.98□□□□□ -0.33
CLCN6-208ENST00000494028 TRIM28Q13263 835 aaKnown RBP12.98□□□□□ -0.33
CLCN6-208ENST00000494028 TCIRG1Q13488 830 aa12.98□□□□□ -0.33
CLCN6-208ENST00000494028 TNNI3KQ59H18 835 aa12.98□□□□□ -0.33
CLCN6-208ENST00000494028 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-208ENST00000494028 C8orf37Q96NL8 207 aa12.98□□□□□ -0.33
CLCN6-208ENST00000494028 CCDC8Q9H0W5 538 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-208ENST00000494028 ANO2Q9NQ90 1003 aa12.98□□□□□ -0.33
CLCN6-208ENST00000494028 ZNF330Q9Y3S2 320 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-208ENST00000494028 FPGT-TNNI3KV9GXZ4 949 aa12.98□□□□□ -0.33
CLCN6-208ENST00000494028 MED23Q9ULK4 1368 aa12.97□□□□□ -0.33
CLCN6-208ENST00000494028 CDHR2Q9BYE9 1310 aa12.97□□□□□ -0.33
CLCN6-208ENST00000494028 PCCAP05165 728 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-208ENST00000494028 MYT1Q01538 1121 aa12.97□□□□□ -0.33
CLCN6-208ENST00000494028 VPS72Q15906 364 aa12.97□□□□□ -0.33
CLCN6-208ENST00000494028 GIGYF2Q6Y7W6 1299 aaKnown RBP12.97□□□□□ -0.33
CLCN6-208ENST00000494028 SPRYD3Q8NCJ5 442 aa12.97□□□□□ -0.33
CLCN6-208ENST00000494028 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
CLCN6-208ENST00000494028 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-208ENST00000494028 DBNLQ9UJU6 430 aaKnown RBP12.97□□□□□ -0.33
CLCN6-208ENST00000494028 PALD1Q9ULE6 856 aa12.97□□□□□ -0.33
CLCN6-208ENST00000494028 ATRNO75882 1429 aa12.96□□□□□ -0.33
CLCN6-208ENST00000494028 AFF2P51816 1311 aa12.96□□□□□ -0.33
CLCN6-208ENST00000494028 MCCP23508 829 aa12.96□□□□□ -0.33
CLCN6-208ENST00000494028 TFCP2Q12800 502 aa12.96□□□□□ -0.33
CLCN6-208ENST00000494028 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
CLCN6-208ENST00000494028 LSG1Q9H089 658 aaKnown RBP12.96□□□□□ -0.33
CLCN6-208ENST00000494028 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
CLCN6-208ENST00000494028 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
CLCN6-208ENST00000494028 IL6STP40189 918 aaPredicted RBP12.95□□□□□ -0.34
CLCN6-208ENST00000494028 ANAPC15P60006 121 aa12.95□□□□□ -0.34
CLCN6-208ENST00000494028 HLFQ16534 295 aa12.95□□□□□ -0.34
CLCN6-208ENST00000494028 HSP90AB3PQ58FF7 597 aa12.95□□□□□ -0.34
CLCN6-208ENST00000494028 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
CLCN6-208ENST00000494028 EVI5LQ96CN4 794 aa12.95□□□□□ -0.34
CLCN6-208ENST00000494028 DIAPH3Q9NSV4 1193 aa12.95□□□□□ -0.34
CLCN6-208ENST00000494028 CHMP3Q9Y3E7 222 aa12.95□□□□□ -0.34
CLCN6-208ENST00000494028 UBN2Q6ZU65 1347 aa12.94□□□□□ -0.34
CLCN6-208ENST00000494028 FRAT2O75474 233 aaPredicted RBP12.94□□□□□ -0.34
CLCN6-208ENST00000494028 CIAO1O76071 339 aa12.94□□□□□ -0.34
CLCN6-208ENST00000494028 ITPK1Q13572 414 aa12.94□□□□□ -0.34
CLCN6-208ENST00000494028 NLRP10Q86W26 655 aa12.94□□□□□ -0.34
CLCN6-208ENST00000494028 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
CLCN6-208ENST00000494028 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
CLCN6-208ENST00000494028 DBNDD2Q9BQY9 259 aa12.94□□□□□ -0.34
CLCN6-208ENST00000494028 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
CLCN6-208ENST00000494028 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
CLCN6-208ENST00000494028 DOCK2Q92608 1830 aa12.94□□□□□ -0.34
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