RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 DZIP3Q86Y13 1208 aaKnown RBP13.28□□□□□ -0.28
NR1H3-225ENST00000494018 NIM1KQ8IY84 436 aa13.28□□□□□ -0.28
NR1H3-225ENST00000494018 SLC17A8Q8NDX2 589 aa13.28□□□□□ -0.28
NR1H3-225ENST00000494018 CSRNP1Q96S65 589 aa13.28□□□□□ -0.28
NR1H3-225ENST00000494018 PSMD1Q99460 953 aa13.28□□□□□ -0.28
NR1H3-225ENST00000494018 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
NR1H3-225ENST00000494018 CDC37L1Q7L3B6 337 aa13.27□□□□□ -0.29
NR1H3-225ENST00000494018 NPM2Q86SE8 214 aaKnown RBP13.27□□□□□ -0.29
NR1H3-225ENST00000494018 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
NR1H3-225ENST00000494018 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.29
NR1H3-225ENST00000494018 TRIOBPQ9H2D6 2365 aa13.27□□□□□ -0.29
NR1H3-225ENST00000494018 TBC1D8O95759 1140 aa13.26□□□□□ -0.29
NR1H3-225ENST00000494018 ALDH1B1P30837 517 aa13.26□□□□□ -0.29
NR1H3-225ENST00000494018 AOC3Q16853 763 aa13.26□□□□□ -0.29
NR1H3-225ENST00000494018 TTC5Q8N0Z6 440 aa13.26□□□□□ -0.29
NR1H3-225ENST00000494018 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
NR1H3-225ENST00000494018 ZNF496Q96IT1 587 aaPredicted RBP13.26□□□□□ -0.29
NR1H3-225ENST00000494018 POTEFA5A3E0 1075 aa13.25□□□□□ -0.29
NR1H3-225ENST00000494018 PPIP5K2O43314 1243 aa13.25□□□□□ -0.29
NR1H3-225ENST00000494018 SLC24A1O60721 1099 aa13.25□□□□□ -0.29
NR1H3-225ENST00000494018 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
NR1H3-225ENST00000494018 CXCL9Q07325 125 aa13.25□□□□□ -0.29
NR1H3-225ENST00000494018 ZNF296Q8WUU4 475 aaPredicted RBP13.25□□□□□ -0.29
NR1H3-225ENST00000494018 GBA2Q9HCG7 927 aaPredicted RBP13.25□□□□□ -0.29
NR1H3-225ENST00000494018 CENPFP49454 3210 aa13.24□□□□□ -0.29
NR1H3-225ENST00000494018 NPC1L1Q9UHC9 1359 aa13.24□□□□□ -0.29
NR1H3-225ENST00000494018 KLRG2A4D1S0 409 aaPredicted RBP13.24□□□□□ -0.29
NR1H3-225ENST00000494018 ADM5C9JUS6 153 aa13.24□□□□□ -0.29
NR1H3-225ENST00000494018 RAD17O75943 681 aa13.24□□□□□ -0.29
NR1H3-225ENST00000494018 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
NR1H3-225ENST00000494018 BCL2L13Q9BXK5 485 aa13.24□□□□□ -0.29
NR1H3-225ENST00000494018 PGAP2Q9UHJ9 254 aa13.24□□□□□ -0.29
NR1H3-225ENST00000494018 NIP7Q9Y221 180 aaKnown RBP eCLIP13.24□□□□□ -0.29
NR1H3-225ENST00000494018 MRC1P22897 1456 aa13.23□□□□□ -0.29
NR1H3-225ENST00000494018 GTF2E1P29083 439 aaPredicted RBP13.23□□□□□ -0.29
NR1H3-225ENST00000494018 TPTE2Q6XPS3 522 aa13.23□□□□□ -0.29
NR1H3-225ENST00000494018 C2orf69Q8N8R5 385 aa13.23□□□□□ -0.29
NR1H3-225ENST00000494018 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
NR1H3-225ENST00000494018 HMOX1P09601 288 aa13.22□□□□□ -0.29
NR1H3-225ENST00000494018 NUTM1Q86Y26 1132 aa13.22□□□□□ -0.29
NR1H3-225ENST00000494018 COL6A3P12111 3177 aa13.22□□□□□ -0.29
NR1H3-225ENST00000494018 CUL9Q8IWT3 2517 aa13.21□□□□□ -0.29
NR1H3-225ENST00000494018 CEP290O15078 2479 aa13.21□□□□□ -0.29
NR1H3-225ENST00000494018 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
NR1H3-225ENST00000494018 SLC10A3P09131 477 aa13.21□□□□□ -0.29
NR1H3-225ENST00000494018 PKN2Q16513 984 aaKnown RBP13.21□□□□□ -0.29
NR1H3-225ENST00000494018 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
NR1H3-225ENST00000494018 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
NR1H3-225ENST00000494018 CNOT7Q9UIV1 285 aaKnown RBP13.21□□□□□ -0.29
NR1H3-225ENST00000494018 PAPPA2Q9BXP8 1791 aa13.21□□□□□ -0.29
NR1H3-225ENST00000494018 KIAA0100Q14667 2235 aaKnown RBP13.2□□□□□ -0.3
NR1H3-225ENST00000494018 BRCA2P51587 3418 aa13.2□□□□□ -0.3
NR1H3-225ENST00000494018 PRAMEF22A3QJZ6 481 aa13.2□□□□□ -0.3
NR1H3-225ENST00000494018 KCNQ3O43525 872 aa13.2□□□□□ -0.3
NR1H3-225ENST00000494018 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
NR1H3-225ENST00000494018 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
NR1H3-225ENST00000494018 RBM26Q5T8P6 1007 aaKnown RBP13.2□□□□□ -0.3
NR1H3-225ENST00000494018 FBXO46Q6PJ61 603 aaPredicted RBP13.2□□□□□ -0.3
NR1H3-225ENST00000494018 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
NR1H3-225ENST00000494018 EGFRP00533 1210 aa13.19□□□□□ -0.3
NR1H3-225ENST00000494018 HLFQ16534 295 aa13.19□□□□□ -0.3
NR1H3-225ENST00000494018 ZC3H15Q8WU90 426 aaKnown RBP13.19□□□□□ -0.3
NR1H3-225ENST00000494018 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
NR1H3-225ENST00000494018 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
NR1H3-225ENST00000494018 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
NR1H3-225ENST00000494018 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
NR1H3-225ENST00000494018 HTTP42858 3142 aa13.19□□□□□ -0.3
NR1H3-225ENST00000494018 PPEF1O14829 653 aaPredicted RBP13.18□□□□□ -0.3
NR1H3-225ENST00000494018 EN2P19622 333 aaPredicted RBP13.18□□□□□ -0.3
NR1H3-225ENST00000494018 ZNF790Q6PG37 636 aa13.18□□□□□ -0.3
NR1H3-225ENST00000494018 MICALL2Q8IY33 904 aa13.18□□□□□ -0.3
NR1H3-225ENST00000494018 TEX13AQ9BXU3 409 aaPredicted RBP13.18□□□□□ -0.3
NR1H3-225ENST00000494018 IL13P35225 146 aa13.17□□□□□ -0.3
NR1H3-225ENST00000494018 MKRN3Q13064 507 aaKnown RBP13.17□□□□□ -0.3
NR1H3-225ENST00000494018 CC2D2BQ6DHV5 1058 aa13.17□□□□□ -0.3
NR1H3-225ENST00000494018 RASAL3Q86YV0 1011 aa13.17□□□□□ -0.3
NR1H3-225ENST00000494018 R3HDMLQ9H3Y0 253 aa13.17□□□□□ -0.3
NR1H3-225ENST00000494018 ZNF652Q9Y2D9 606 aa13.17□□□□□ -0.3
NR1H3-225ENST00000494018 H7C1D1 291 aa13.16□□□□□ -0.3
NR1H3-225ENST00000494018 GPR25O00155 361 aa13.16□□□□□ -0.3
NR1H3-225ENST00000494018 CDCA8Q53HL2 280 aa13.16□□□□□ -0.3
NR1H3-225ENST00000494018 CLEC4GQ6UXB4 293 aa13.16□□□□□ -0.3
NR1H3-225ENST00000494018 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
NR1H3-225ENST00000494018 TEFQ10587 303 aa13.15□□□□□ -0.3
NR1H3-225ENST00000494018 CRY2Q49AN0 593 aa13.15□□□□□ -0.3
NR1H3-225ENST00000494018 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
NR1H3-225ENST00000494018 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
NR1H3-225ENST00000494018 FMNL2Q96PY5 1086 aa13.15□□□□□ -0.3
NR1H3-225ENST00000494018 YDJCA8MPS7 323 aa13.14□□□□□ -0.31
NR1H3-225ENST00000494018 TNIP1Q15025 636 aa13.14□□□□□ -0.31
NR1H3-225ENST00000494018 NGEFQ8N5V2 710 aa13.14□□□□□ -0.31
NR1H3-225ENST00000494018 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
NR1H3-225ENST00000494018 SCAF8Q9UPN6 1271 aaKnown RBP13.14□□□□□ -0.31
NR1H3-225ENST00000494018 H0YGN5 161 aa13.13□□□□□ -0.31
NR1H3-225ENST00000494018 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
NR1H3-225ENST00000494018 IL17REQ8NFR9 667 aa13.13□□□□□ -0.31
NR1H3-225ENST00000494018 RBM17Q96I25 401 aaKnown RBP13.13□□□□□ -0.31
NR1H3-225ENST00000494018 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
NR1H3-225ENST00000494018 GPTP24298 496 aa13.12□□□□□ -0.31
NR1H3-225ENST00000494018 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms