RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 CCT2P78371 535 aaKnown RBP23.1■■□□□ 1.29
RNF40-203ENST00000493683 CTNNBL1Q8WYA6 563 aaPredicted RBP23.1■■□□□ 1.29
RNF40-203ENST00000493683 SNAPC4Q5SXM2 1469 aa23.1■■□□□ 1.29
RNF40-203ENST00000493683 BICDL1Q6ZP65 573 aa23.1■■□□□ 1.29
RNF40-203ENST00000493683 PLVAPQ9BX97 442 aa23.1■■□□□ 1.29
RNF40-203ENST00000493683 FSD2A1L4K1 749 aa23.1■■□□□ 1.29
RNF40-203ENST00000493683 NUCB1Q02818 461 aa23.1■■□□□ 1.29
RNF40-203ENST00000493683 PPM1EQ8WY54 764 aa23.1■■□□□ 1.29
RNF40-203ENST00000493683 ZFYP08048 801 aaPredicted RBP23.09■■□□□ 1.29
RNF40-203ENST00000493683 BCCIPQ9P287 314 aaKnown RBP eCLIP23.09■■□□□ 1.29
RNF40-203ENST00000493683 TMCO5BA8MYB1 307 aa23.09■■□□□ 1.29
RNF40-203ENST00000493683 UQCRFS1P1P0C7P4 283 aa23.09■■□□□ 1.29
RNF40-203ENST00000493683 CTNNA2P26232 953 aa23.09■■□□□ 1.29
RNF40-203ENST00000493683 GNG11P61952 73 aa23.09■■□□□ 1.29
RNF40-203ENST00000493683 WDHD1O75717 1129 aaPredicted RBP23.09■■□□□ 1.29
RNF40-203ENST00000493683 NBPF7P0C2Y1 421 aaPredicted RBP23.09■■□□□ 1.29
RNF40-203ENST00000493683 TMTC2Q8N394 836 aa23.09■■□□□ 1.29
RNF40-203ENST00000493683 TFIP11Q9UBB9 837 aaKnown RBP23.09■■□□□ 1.29
RNF40-203ENST00000493683 SPTY2D1Q68D10 685 aaPredicted RBP23.08■■□□□ 1.29
RNF40-203ENST00000493683 KRT222Q8N1A0 295 aa23.08■■□□□ 1.29
RNF40-203ENST00000493683 WASLO00401 505 aaPredicted RBP23.08■■□□□ 1.29
RNF40-203ENST00000493683 MFSD6Q6ZSS7 791 aa23.08■■□□□ 1.29
RNF40-203ENST00000493683 NME9Q86XW9 330 aa23.08■■□□□ 1.29
RNF40-203ENST00000493683 HSF2BPO75031 334 aa23.08■■□□□ 1.28
RNF40-203ENST00000493683 CYLC1P35663 651 aaPredicted RBP23.08■■□□□ 1.28
RNF40-203ENST00000493683 C6orf163Q5TEZ5 329 aa23.08■■□□□ 1.28
RNF40-203ENST00000493683 GTF2F1P35269 517 aaKnown RBP eCLIP23.08■■□□□ 1.28
RNF40-203ENST00000493683 ANKIB1Q9P2G1 1089 aa23.08■■□□□ 1.28
RNF40-203ENST00000493683 FAM200AQ8TCP9 573 aa23.07■■□□□ 1.28
RNF40-203ENST00000493683 SNX21Q969T3 373 aa23.07■■□□□ 1.28
RNF40-203ENST00000493683 FERMT1Q9BQL6 677 aa23.07■■□□□ 1.28
RNF40-203ENST00000493683 GTPBP4Q9BZE4 634 aaKnown RBP23.07■■□□□ 1.28
RNF40-203ENST00000493683 RBM25P49756 843 aaKnown RBP23.07■■□□□ 1.28
RNF40-203ENST00000493683 CDC5LQ99459 802 aaKnown RBP23.07■■□□□ 1.28
RNF40-203ENST00000493683 PTCD1O75127 700 aaKnown RBP23.07■■□□□ 1.28
RNF40-203ENST00000493683 CWC25Q9NXE8 425 aaPredicted RBP23.07■■□□□ 1.28
RNF40-203ENST00000493683 BAG3O95817 575 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 IVLP07476 585 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 TMX3Q96JJ7 454 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 KAT14Q9H8E8 782 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 BIN1O00499 593 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 SYKP43405 635 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 TRAF1Q13077 416 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 MAATS1Q7Z4T9 603 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 ABCC5O15440 1437 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 N4BP3O15049 544 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 CLCN1P35523 988 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 FEZ1Q99689 392 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 EMILIN1Q9Y6C2 1016 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
RNF40-203ENST00000493683 CDK13Q14004 1512 aaKnown RBP23.06■■□□□ 1.28
RNF40-203ENST00000493683 KRT23Q9C075 422 aa23.05■■□□□ 1.28
RNF40-203ENST00000493683 JADE2Q9NQC1 790 aa23.05■■□□□ 1.28
RNF40-203ENST00000493683 SCLT1Q96NL6 688 aa23.05■■□□□ 1.28
RNF40-203ENST00000493683 MAP3K2Q9Y2U5 619 aa23.05■■□□□ 1.28
RNF40-203ENST00000493683 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
RNF40-203ENST00000493683 KIF14Q15058 1648 aa23.05■■□□□ 1.28
RNF40-203ENST00000493683 PRPHP41219 470 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 CCDC82Q8N4S0 544 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 CCDC155Q8N6L0 562 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 GDPD2Q9HCC8 539 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 HS1BP3Q53T59 392 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 PPP1R42Q7Z4L9 355 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 IDEP14735 1019 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 CNNM2Q9H8M5 875 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 PRDM10Q9NQV6 1147 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 EXOC1Q9NV70 894 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 CTAGE15A4D2H0 777 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 CTAGE8P0CG41 777 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 LMAN1P49257 510 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 UBASH3AP57075 661 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 CTAGE6Q86UF2 777 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 CTAGE4Q8IX94 777 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 FERMT2Q96AC1 680 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 PHF8Q9UPP1 1060 aa23.04■■□□□ 1.28
RNF40-203ENST00000493683 NOP2P46087 812 aaKnown RBP23.04■■□□□ 1.28
RNF40-203ENST00000493683 TRIM47Q96LD4 638 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 ARFGAP3Q9NP61 516 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 AKR1B10O60218 316 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 UBE4AQ14139 1066 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 TCERG1LQ5VWI1 586 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 USP37Q86T82 979 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 ANKRD24Q8TF21 1146 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 ERMNQ8TAM6 284 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 NSRP1Q9H0G5 558 aaKnown RBP23.03■■□□□ 1.28
RNF40-203ENST00000493683 IQGAP2Q13576 1575 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 KIAA0753Q2KHM9 967 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 WAPLQ7Z5K2 1190 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 MRPS27Q92552 414 aaKnown RBP23.03■■□□□ 1.28
RNF40-203ENST00000493683 MBIPQ9NS73 344 aa23.03■■□□□ 1.28
RNF40-203ENST00000493683 MACROD2A1Z1Q3 448 aa23.02■■□□□ 1.28
RNF40-203ENST00000493683 DNA2P51530 1060 aa23.02■■□□□ 1.28
RNF40-203ENST00000493683 CEP63Q96MT8 703 aa23.02■■□□□ 1.28
RNF40-203ENST00000493683 C11orf95C9JLR9 678 aaPredicted RBP23.02■■□□□ 1.28
RNF40-203ENST00000493683 HCLS1P14317 486 aaPredicted RBP23.02■■□□□ 1.28
RNF40-203ENST00000493683 RHPN1Q8TCX5 695 aa23.02■■□□□ 1.28
RNF40-203ENST00000493683 SLC26A6Q9BXS9 759 aa23.02■■□□□ 1.28
RNF40-203ENST00000493683 PCF11O94913 1555 aaKnown RBP23.02■■□□□ 1.28
RNF40-203ENST00000493683 ARHGEF11O15085 1522 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms