RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 ATRNO75882 1429 aa11.23□□□□□ -0.61
SMARCC1-208ENST00000492896 LY75O60449 1722 aa11.23□□□□□ -0.61
SMARCC1-208ENST00000492896 LOC102724428A0A0B4J2F2 783 aa11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 SIK1P57059 783 aa11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 SCN7AQ01118 1682 aa11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 BECN1Q14457 450 aa11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 TSHZ3Q63HK5 1081 aa11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 TTC41PQ6P2S7 1318 aa11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 TAF1LQ8IZX4 1826 aa11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 COPRSQ9NQ92 184 aa11.22□□□□□ -0.61
SMARCC1-208ENST00000492896 AFF2P51816 1311 aa11.21□□□□□ -0.61
SMARCC1-208ENST00000492896 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
SMARCC1-208ENST00000492896 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
SMARCC1-208ENST00000492896 RBM25P49756 843 aaKnown RBP11.21□□□□□ -0.61
SMARCC1-208ENST00000492896 TRIM28Q13263 835 aaKnown RBP11.21□□□□□ -0.61
SMARCC1-208ENST00000492896 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
SMARCC1-208ENST00000492896 CCDC87Q9NVE4 849 aa11.21□□□□□ -0.61
SMARCC1-208ENST00000492896 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 ERVV-1B6SEH8 477 aa11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 IFIT2P09913 472 aaKnown RBP11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 FOXO4P98177 505 aa11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 LMBR1LQ6UX01 489 aa11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 DZIP3Q86Y13 1208 aaKnown RBP11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 PI4K2BQ8TCG2 481 aa11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 ARXQ96QS3 562 aa11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 SIL1Q9H173 461 aa11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 CHMP3Q9Y3E7 222 aa11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 CASZ1Q86V15 1759 aa11.2□□□□□ -0.62
SMARCC1-208ENST00000492896 BRWD3Q6RI45 1802 aa11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 DDX60Q8IY21 1712 aaKnown RBP11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 ERC2O15083 957 aa11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 KCNQ2O43526 872 aa11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 SASH1O94885 1247 aa11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 CRKLP46109 303 aaKnown RBP11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 PTPN12Q05209 780 aaKnown RBP11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 ITPK1Q13572 414 aa11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 AACSQ86V21 672 aa11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 KLHDC4Q8TBB5 520 aa11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 RILPL2Q969X0 211 aa11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 GJD4Q96KN9 370 aaPredicted RBP11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 TRPC5Q9UL62 973 aaPredicted RBP11.19□□□□□ -0.62
SMARCC1-208ENST00000492896 CDHR2Q9BYE9 1310 aa11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 REC8O95072 547 aa11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 EIF5P55010 431 aaKnown RBP11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 HLFQ16534 295 aa11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 INTS5Q6P9B9 1019 aaKnown RBP11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 NLRP10Q86W26 655 aa11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 CNTROBQ8N137 903 aa11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 ZBTB38Q8NAP3 1195 aaPredicted RBP11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 PLA2G12BQ9BX93 195 aa11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 ECHDC1Q9NTX5 307 aa11.18□□□□□ -0.62
SMARCC1-208ENST00000492896 SPEF2Q9C093 1822 aa11.17□□□□□ -0.62
SMARCC1-208ENST00000492896 GPTP24298 496 aa11.17□□□□□ -0.62
SMARCC1-208ENST00000492896 LRP5O75197 1615 aa11.17□□□□□ -0.62
SMARCC1-208ENST00000492896 C4AP0C0L4 1744 aa11.16□□□□□ -0.62
SMARCC1-208ENST00000492896 C4BP0C0L5 1744 aa11.16□□□□□ -0.62
SMARCC1-208ENST00000492896 CHMLP26374 656 aa11.16□□□□□ -0.62
SMARCC1-208ENST00000492896 SLC4A3P48751 1232 aa11.16□□□□□ -0.62
SMARCC1-208ENST00000492896 EAF2Q96CJ1 260 aaPredicted RBP11.16□□□□□ -0.62
SMARCC1-208ENST00000492896 ESYT1Q9BSJ8 1104 aa11.16□□□□□ -0.62
SMARCC1-208ENST00000492896 TBC1D2BQ9UPU7 963 aa11.16□□□□□ -0.62
SMARCC1-208ENST00000492896 ZNF609O15014 1411 aa11.16□□□□□ -0.62
SMARCC1-208ENST00000492896 COL24A1Q17RW2 1714 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 CNTNAP4Q9C0A0 1308 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 CIAO1O76071 339 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 IL15P40933 162 aaPredicted RBP11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 TFCP2Q12800 502 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 TNNI3KQ59H18 835 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 HSCBQ8IWL3 235 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 ZNF34Q8IZ26 560 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 FAM89AQ96GI7 184 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 CCDC8Q9H0W5 538 aaPredicted RBP11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 FPGT-TNNI3KV9GXZ4 949 aa11.15□□□□□ -0.62
SMARCC1-208ENST00000492896 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.63
SMARCC1-208ENST00000492896 UBN2Q6ZU65 1347 aa11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 EYA2O00167 538 aa11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 CAMTA2O94983 1202 aa11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 MAP4K4O95819 1239 aaPredicted RBP11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 CCDC57Q2TAC2 916 aa11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 ANP32EQ9BTT0 268 aa11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 USP26Q9BXU7 913 aa11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 TLR7Q9NYK1 1049 aaKnown RBP11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 TRMT112Q9UI30 125 aaKnown RBP11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 ZNF652Q9Y2D9 606 aa11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.14□□□□□ -0.63
SMARCC1-208ENST00000492896 MYH7P12883 1935 aa11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 ONECUT3O60422 494 aaPredicted RBP11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 CSF1RP07333 972 aa11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 CTSWP56202 376 aa11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 PARP10Q53GL7 1025 aa11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 TAF7LQ5H9L4 462 aa11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 SEPT12Q8IYM1 358 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms