RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 BRPF1P55201 1214 aaPredicted RBP16.24■□□□□ 0.19
GPNMB-214ENST00000492858 CC2D2BQ6DHV5 1058 aa16.24■□□□□ 0.19
GPNMB-214ENST00000492858 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
GPNMB-214ENST00000492858 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
GPNMB-214ENST00000492858 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
GPNMB-214ENST00000492858 ABCC12Q96J65 1359 aa16.23■□□□□ 0.19
GPNMB-214ENST00000492858 RGL2O15211 777 aa16.22■□□□□ 0.19
GPNMB-214ENST00000492858 HLFQ16534 295 aa16.22■□□□□ 0.19
GPNMB-214ENST00000492858 CRY2Q49AN0 593 aa16.22■□□□□ 0.19
GPNMB-214ENST00000492858 CIAPIN1Q6FI81 312 aa16.22■□□□□ 0.19
GPNMB-214ENST00000492858 NIM1KQ8IY84 436 aa16.22■□□□□ 0.19
GPNMB-214ENST00000492858 ADARB2Q9NS39 739 aaKnown RBP16.22■□□□□ 0.19
GPNMB-214ENST00000492858 TRPM7Q96QT4 1865 aa16.22■□□□□ 0.19
GPNMB-214ENST00000492858 PDE4DIPQ5VU43 2346 aa16.21■□□□□ 0.19
GPNMB-214ENST00000492858 NBPF26B4DH59 902 aa16.21■□□□□ 0.19
GPNMB-214ENST00000492858 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
GPNMB-214ENST00000492858 NBPF10Q6P3W6 841 aaKnown RBP16.21■□□□□ 0.19
GPNMB-214ENST00000492858 SLC51AQ86UW1 340 aa16.21■□□□□ 0.19
GPNMB-214ENST00000492858 NUTM1Q86Y26 1132 aa16.21■□□□□ 0.19
GPNMB-214ENST00000492858 NBPF15Q8N660 670 aa16.21■□□□□ 0.19
GPNMB-214ENST00000492858 RPGRQ92834 1020 aaKnown RBP16.21■□□□□ 0.19
GPNMB-214ENST00000492858 HHIPL1Q96JK4 782 aa16.21■□□□□ 0.19
GPNMB-214ENST00000492858 GPRC5DQ9NZD1 345 aa16.21■□□□□ 0.19
GPNMB-214ENST00000492858 CASP8AP2Q9UKL3 1982 aa16.2■□□□□ 0.18
GPNMB-214ENST00000492858 TCERG1O14776 1098 aaKnown RBP16.2■□□□□ 0.18
GPNMB-214ENST00000492858 GLIS2Q9BZE0 524 aaPredicted RBP16.2■□□□□ 0.18
GPNMB-214ENST00000492858 ZNF408Q9H9D4 720 aa16.2■□□□□ 0.18
GPNMB-214ENST00000492858 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
GPNMB-214ENST00000492858 GRIPAP1Q4V328 841 aa16.19■□□□□ 0.18
GPNMB-214ENST00000492858 NYXQ9GZU5 481 aa16.19■□□□□ 0.18
GPNMB-214ENST00000492858 PPEF1O14829 653 aaPredicted RBP16.18■□□□□ 0.18
GPNMB-214ENST00000492858 HOXA10P31260 410 aaPredicted RBP16.18■□□□□ 0.18
GPNMB-214ENST00000492858 SOX10P56693 466 aa16.18■□□□□ 0.18
GPNMB-214ENST00000492858 CC2D1BQ5T0F9 858 aaKnown RBP16.18■□□□□ 0.18
GPNMB-214ENST00000492858 COL3A1P02461 1466 aaPredicted RBP16.17■□□□□ 0.18
GPNMB-214ENST00000492858 NOGQ13253 232 aa16.17■□□□□ 0.18
GPNMB-214ENST00000492858 AOC3Q16853 763 aa16.17■□□□□ 0.18
GPNMB-214ENST00000492858 PHACTR3Q96KR7 559 aa16.17■□□□□ 0.18
GPNMB-214ENST00000492858 ZIC5Q96T25 663 aa16.17■□□□□ 0.18
GPNMB-214ENST00000492858 NPC1L1Q9UHC9 1359 aa16.16■□□□□ 0.18
GPNMB-214ENST00000492858 GMPSP49915 693 aaPredicted RBP16.16■□□□□ 0.18
GPNMB-214ENST00000492858 CXCL9Q07325 125 aa16.16■□□□□ 0.18
GPNMB-214ENST00000492858 RBM17Q96I25 401 aaKnown RBP16.16■□□□□ 0.18
GPNMB-214ENST00000492858 KIF7Q2M1P5 1343 aa16.16■□□□□ 0.18
GPNMB-214ENST00000492858 PRKAR2BP31323 418 aa16.15■□□□□ 0.18
GPNMB-214ENST00000492858 RIC1Q4ADV7 1423 aa16.15■□□□□ 0.18
GPNMB-214ENST00000492858 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
GPNMB-214ENST00000492858 CRAMP1Q96RY5 1269 aa16.15■□□□□ 0.18
GPNMB-214ENST00000492858 PGAP2Q9UHJ9 254 aa16.15■□□□□ 0.18
GPNMB-214ENST00000492858 HUNKP57058 714 aa16.14■□□□□ 0.17
GPNMB-214ENST00000492858 MCM10Q7L590 875 aa16.14■□□□□ 0.17
GPNMB-214ENST00000492858 ZC3H15Q8WU90 426 aaKnown RBP16.14■□□□□ 0.17
GPNMB-214ENST00000492858 ZNRF3Q9ULT6 936 aa16.14■□□□□ 0.17
GPNMB-214ENST00000492858 GPTP24298 496 aa16.13■□□□□ 0.17
GPNMB-214ENST00000492858 HIRAP54198 1017 aaPredicted RBP16.13■□□□□ 0.17
GPNMB-214ENST00000492858 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
GPNMB-214ENST00000492858 PRPF38BQ5VTL8 546 aaKnown RBP16.13■□□□□ 0.17
GPNMB-214ENST00000492858 CDC37L1Q7L3B6 337 aa16.13■□□□□ 0.17
GPNMB-214ENST00000492858 TRPM4Q8TD43 1214 aa16.13■□□□□ 0.17
GPNMB-214ENST00000492858 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
GPNMB-214ENST00000492858 TMX4Q9H1E5 349 aaPredicted RBP16.13■□□□□ 0.17
GPNMB-214ENST00000492858 ERVV-1B6SEH8 477 aa16.12■□□□□ 0.17
GPNMB-214ENST00000492858 C3orf67Q6ZVT6 689 aa16.12■□□□□ 0.17
GPNMB-214ENST00000492858 BCL2L13Q9BXK5 485 aa16.12■□□□□ 0.17
GPNMB-214ENST00000492858 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
GPNMB-214ENST00000492858 VPS33BQ9H267 617 aa16.12■□□□□ 0.17
GPNMB-214ENST00000492858 MAP3K15Q6ZN16 1313 aa16.12■□□□□ 0.17
GPNMB-214ENST00000492858 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
GPNMB-214ENST00000492858 CDHR2Q9BYE9 1310 aa16.12■□□□□ 0.17
GPNMB-214ENST00000492858 IBTKQ9P2D0 1353 aaPredicted RBP16.12■□□□□ 0.17
GPNMB-214ENST00000492858 PER1O15534 1290 aaPredicted RBP16.11■□□□□ 0.17
GPNMB-214ENST00000492858 RAD17O75943 681 aa16.11■□□□□ 0.17
GPNMB-214ENST00000492858 SUSD4Q5VX71 490 aa16.11■□□□□ 0.17
GPNMB-214ENST00000492858 TTLL7Q6ZT98 887 aa16.11■□□□□ 0.17
GPNMB-214ENST00000492858 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
GPNMB-214ENST00000492858 ATP6V0A2Q9Y487 856 aa16.11■□□□□ 0.17
GPNMB-214ENST00000492858 DCTN1Q14203 1278 aa16.1■□□□□ 0.17
GPNMB-214ENST00000492858 DLK2Q6UY11 383 aa16.1■□□□□ 0.17
GPNMB-214ENST00000492858 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
GPNMB-214ENST00000492858 SUPT20HQ8NEM7 779 aa16.1■□□□□ 0.17
GPNMB-214ENST00000492858 SAGE1Q9NXZ1 904 aa16.1■□□□□ 0.17
GPNMB-214ENST00000492858 SHTN1A0MZ66 631 aa16.09■□□□□ 0.17
GPNMB-214ENST00000492858 FAM155AB1AL88 458 aaPredicted RBP16.09■□□□□ 0.17
GPNMB-214ENST00000492858 NTSR2O95665 410 aa16.09■□□□□ 0.17
GPNMB-214ENST00000492858 TNIP1Q15025 636 aa16.09■□□□□ 0.17
GPNMB-214ENST00000492858 RTFDC1Q9BY42 306 aaPredicted RBP16.09■□□□□ 0.17
GPNMB-214ENST00000492858 ZBTB3Q9H5J0 574 aa16.09■□□□□ 0.17
GPNMB-214ENST00000492858 CNOT7Q9UIV1 285 aaKnown RBP16.09■□□□□ 0.17
GPNMB-214ENST00000492858 TRPA1O75762 1119 aa16.08■□□□□ 0.16
GPNMB-214ENST00000492858 KIF23Q02241 960 aaPredicted RBP16.08■□□□□ 0.16
GPNMB-214ENST00000492858 RGMBQ6NW40 437 aa16.08■□□□□ 0.16
GPNMB-214ENST00000492858 DPP8Q6V1X1 898 aaPredicted RBP16.08■□□□□ 0.16
GPNMB-214ENST00000492858 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
GPNMB-214ENST00000492858 MIS18AQ9NYP9 233 aa16.08■□□□□ 0.16
GPNMB-214ENST00000492858 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.16
GPNMB-214ENST00000492858 H7C1D1 291 aa16.07■□□□□ 0.16
GPNMB-214ENST00000492858 KIAA2012Q0VF49 1180 aa16.07■□□□□ 0.16
GPNMB-214ENST00000492858 CCDC102AQ96A19 550 aa16.07■□□□□ 0.16
GPNMB-214ENST00000492858 GBA2Q9HCG7 927 aaPredicted RBP16.07■□□□□ 0.16
GPNMB-214ENST00000492858 RNF186Q9NXI6 227 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms