RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
RBM39-237ENST00000492779 PDIA6Q15084 440 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 MPNDQ8N594 471 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 LINC00116Q8NCU8 138 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 GCC1Q96CN9 775 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 FMNL2Q96PY5 1086 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 MRC1P22897 1456 aa8.07□□□□□ -1.12
RBM39-237ENST00000492779 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
RBM39-237ENST00000492779 CAVIN1Q6NZI2 390 aaKnown RBP8.07□□□□□ -1.12
RBM39-237ENST00000492779 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
RBM39-237ENST00000492779 ARHGAP45Q92619 1136 aa8.07□□□□□ -1.12
RBM39-237ENST00000492779 PDGFDQ9GZP0 370 aaPredicted RBP8.07□□□□□ -1.12
RBM39-237ENST00000492779 TMEM63CQ9P1W3 806 aa8.07□□□□□ -1.12
RBM39-237ENST00000492779 ZBTB1Q9Y2K1 713 aa8.07□□□□□ -1.12
RBM39-237ENST00000492779 SIPA1L3O60292 1781 aaPredicted RBP8.07□□□□□ -1.12
RBM39-237ENST00000492779 KCPQ6ZWJ8 1503 aa8.07□□□□□ -1.12
RBM39-237ENST00000492779 TCHHQ07283 1943 aa8.07□□□□□ -1.12
RBM39-237ENST00000492779 CDC45O75419 566 aa8.07□□□□□ -1.12
RBM39-237ENST00000492779 CLEC17AQ6ZS10 378 aa8.07□□□□□ -1.12
RBM39-237ENST00000492779 NOL8Q76FK4 1167 aaKnown RBP8.07□□□□□ -1.12
RBM39-237ENST00000492779 CCNL1Q9UK58 526 aaPredicted RBP8.07□□□□□ -1.12
RBM39-237ENST00000492779 HEG1Q9ULI3 1381 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 SBF2Q86WG5 1849 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 SNRPA1P09661 255 aaKnown RBP8.06□□□□□ -1.12
RBM39-237ENST00000492779 ZSCAN23Q3MJ62 389 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 INTS3Q68E01 1043 aaKnown RBP8.06□□□□□ -1.12
RBM39-237ENST00000492779 ANKRD44Q8N8A2 993 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
RBM39-237ENST00000492779 EXOC6BQ9Y2D4 811 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 DDX49Q9Y6V7 483 aaKnown RBP8.06□□□□□ -1.12
RBM39-237ENST00000492779 BTAF1O14981 1849 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 PNMA6EA0A0J9YXQ4 647 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 PRPF40AO75400 957 aaKnown RBP8.06□□□□□ -1.12
RBM39-237ENST00000492779 PHF14O94880 888 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 TXNRD1Q16881 649 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 TTLL7Q6ZT98 887 aa8.06□□□□□ -1.12
RBM39-237ENST00000492779 KDM3BQ7LBC6 1761 aa8.05□□□□□ -1.12
RBM39-237ENST00000492779 HSP90AA1P07900 732 aaKnown RBP8.05□□□□□ -1.12
RBM39-237ENST00000492779 CYP19A1P11511 503 aaPredicted RBP8.05□□□□□ -1.12
RBM39-237ENST00000492779 CRKLP46109 303 aaKnown RBP8.05□□□□□ -1.12
RBM39-237ENST00000492779 PPP1R9BQ96SB3 815 aa8.05□□□□□ -1.12
RBM39-237ENST00000492779 GDPD2Q9HCC8 539 aa8.05□□□□□ -1.12
RBM39-237ENST00000492779 PRDM4Q9UKN5 801 aa8.05□□□□□ -1.12
RBM39-237ENST00000492779 CIZ1Q9ULV3 898 aaPredicted RBP8.05□□□□□ -1.12
RBM39-237ENST00000492779 TBC1D2BQ9UPU7 963 aa8.05□□□□□ -1.12
RBM39-237ENST00000492779 C5P01031 1676 aa8.05□□□□□ -1.12
RBM39-237ENST00000492779 TUBGCP6Q96RT7 1819 aa8.05□□□□□ -1.12
RBM39-237ENST00000492779 NCLP19338 710 aaKnown RBP8.04□□□□□ -1.12
RBM39-237ENST00000492779 KLHL40Q2TBA0 621 aa8.04□□□□□ -1.12
RBM39-237ENST00000492779 INTS5Q6P9B9 1019 aaKnown RBP8.04□□□□□ -1.12
RBM39-237ENST00000492779 LRP10Q7Z4F1 713 aa8.04□□□□□ -1.12
RBM39-237ENST00000492779 MYH14Q7Z406 1995 aaKnown RBP8.04□□□□□ -1.12
RBM39-237ENST00000492779 NASPP49321 788 aaPredicted RBP8.04□□□□□ -1.12
RBM39-237ENST00000492779 ZNF827Q17R98 1081 aa8.04□□□□□ -1.12
RBM39-237ENST00000492779 COPS6Q7L5N1 327 aa8.04□□□□□ -1.12
RBM39-237ENST00000492779 SALL3Q9BXA9 1300 aa8.04□□□□□ -1.12
RBM39-237ENST00000492779 PLEKHG2Q9H7P9 1386 aa8.03□□□□□ -1.12
RBM39-237ENST00000492779 GADD45BO75293 160 aaPredicted RBP8.03□□□□□ -1.12
RBM39-237ENST00000492779 SLC4A10Q6U841 1118 aa8.03□□□□□ -1.12
RBM39-237ENST00000492779 XAGE3Q8WTP9 111 aa8.03□□□□□ -1.12
RBM39-237ENST00000492779 ZBTB3Q9H5J0 574 aa8.03□□□□□ -1.12
RBM39-237ENST00000492779 ATF5Q9Y2D1 282 aaPredicted RBP8.03□□□□□ -1.12
RBM39-237ENST00000492779 GNPATO15228 680 aa8.03□□□□□ -1.12
RBM39-237ENST00000492779 RNF214Q8ND24 703 aa8.03□□□□□ -1.12
RBM39-237ENST00000492779 UPF1Q92900 1129 aaKnown RBP eCLIP8.03□□□□□ -1.12
RBM39-237ENST00000492779 GBP4Q96PP9 640 aa8.03□□□□□ -1.12
RBM39-237ENST00000492779 CAMKK2Q96RR4 588 aa8.03□□□□□ -1.12
RBM39-237ENST00000492779 SRP68Q9UHB9 627 aaKnown RBP8.03□□□□□ -1.12
RBM39-237ENST00000492779 SYCE3A1L190 88 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 PI4KAP2A4QPH2 592 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 MAP4K4O95819 1239 aaPredicted RBP8.02□□□□□ -1.13
RBM39-237ENST00000492779 HMGB1P09429 215 aaKnown RBP8.02□□□□□ -1.13
RBM39-237ENST00000492779 HSP90B1P14625 803 aaKnown RBP8.02□□□□□ -1.13
RBM39-237ENST00000492779 PDE1AP54750 535 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 FLIIQ13045 1269 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 FKBP5Q13451 457 aaPredicted RBP8.02□□□□□ -1.13
RBM39-237ENST00000492779 HSP90AA2PQ14568 343 aaPredicted RBP8.02□□□□□ -1.13
RBM39-237ENST00000492779 HLFQ16534 295 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 KIAA1211Q6ZU35 1233 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 PI4KAP1Q8N8J0 262 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 TSC1Q92574 1164 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 UPF3BQ9BZI7 483 aaKnown RBP8.02□□□□□ -1.13
RBM39-237ENST00000492779 BABAM1Q9NWV8 329 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 NHSQ6T4R5 1651 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 ATP5J2-PTCD1G3V325 749 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 CCDC30Q5VVM6 783 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 TMX3Q96JJ7 454 aa8.02□□□□□ -1.13
RBM39-237ENST00000492779 UBR2Q8IWV8 1755 aa8.01□□□□□ -1.13
RBM39-237ENST00000492779 FAM177BA6PVY3 158 aa8.01□□□□□ -1.13
RBM39-237ENST00000492779 ZNF445P59923 1031 aa8.01□□□□□ -1.13
RBM39-237ENST00000492779 RABEP1Q15276 862 aa8.01□□□□□ -1.13
RBM39-237ENST00000492779 CWF19L2Q2TBE0 894 aaKnown RBP8.01□□□□□ -1.13
RBM39-237ENST00000492779 SAMD1Q6SPF0 538 aaPredicted RBP8.01□□□□□ -1.13
RBM39-237ENST00000492779 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
RBM39-237ENST00000492779 CCDC24Q8N4L8 307 aa8.01□□□□□ -1.13
RBM39-237ENST00000492779 SMARCC1Q92922 1105 aaPredicted RBP8.01□□□□□ -1.13
RBM39-237ENST00000492779 PDLIM2Q96JY6 352 aa8.01□□□□□ -1.13
RBM39-237ENST00000492779 STK31Q9BXU1 1019 aa8.01□□□□□ -1.13
RBM39-237ENST00000492779 API5Q9BZZ5 524 aaKnown RBP8.01□□□□□ -1.13
RBM39-237ENST00000492779 DBF4Q9UBU7 674 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms