RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	CLEC4G	Q6UXB4	293 aa		12.29	□□□□□ -0.44
TRO-223	ENST00000492142	ZNF34	Q8IZ26	560 aa		12.29	□□□□□ -0.44
TRO-223	ENST00000492142	CWC25	Q9NXE8	425 aa	Predicted RBP	12.29	□□□□□ -0.44
TRO-223	ENST00000492142	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.29	□□□□□ -0.44
TRO-223	ENST00000492142	DDX19B	Q9UMR2	479 aa		12.29	□□□□□ -0.44
TRO-223	ENST00000492142	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.29	□□□□□ -0.44
TRO-223	ENST00000492142	ATP10D	Q9P241	1426 aa		12.28	□□□□□ -0.44
TRO-223	ENST00000492142	TUBGCP6	Q96RT7	1819 aa		12.28	□□□□□ -0.44
TRO-223	ENST00000492142	ZBTB7B	O15156	539 aa	Predicted RBP	12.28	□□□□□ -0.44
TRO-223	ENST00000492142	GYS1	P13807	737 aa		12.28	□□□□□ -0.44
TRO-223	ENST00000492142	TRIM28	Q13263	835 aa	Known RBP	12.28	□□□□□ -0.44
TRO-223	ENST00000492142	GCKR	Q14397	625 aa		12.28	□□□□□ -0.44
TRO-223	ENST00000492142	NLRP10	Q86W26	655 aa		12.28	□□□□□ -0.44
TRO-223	ENST00000492142	CCDC191	Q8NCU4	936 aa		12.28	□□□□□ -0.44
TRO-223	ENST00000492142	MEIS3	Q99687	375 aa		12.28	□□□□□ -0.44
TRO-223	ENST00000492142	USP44	Q9H0E7	712 aa		12.28	□□□□□ -0.44
TRO-223	ENST00000492142	PXDNL	A1KZ92	1463 aa		12.27	□□□□□ -0.44
TRO-223	ENST00000492142	RTL5	Q5HYW3	569 aa	Predicted RBP	12.27	□□□□□ -0.45
TRO-223	ENST00000492142	SUSD4	Q5VX71	490 aa		12.27	□□□□□ -0.45
TRO-223	ENST00000492142	SETDB2	Q96T68	719 aa		12.27	□□□□□ -0.45
TRO-223	ENST00000492142	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.27	□□□□□ -0.45
TRO-223	ENST00000492142	C4A	P0C0L4	1744 aa		12.27	□□□□□ -0.45
TRO-223	ENST00000492142	AFDN	P55196	1824 aa	Known RBP	12.26	□□□□□ -0.45
TRO-223	ENST00000492142	GRM8	O00222	908 aa		12.26	□□□□□ -0.45
TRO-223	ENST00000492142	RGL2	O15211	777 aa		12.26	□□□□□ -0.45
TRO-223	ENST00000492142	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.26	□□□□□ -0.45
TRO-223	ENST00000492142	NFIX	Q14938	502 aa		12.26	□□□□□ -0.45
TRO-223	ENST00000492142	R3HDM1	Q15032	1099 aa	Known RBP	12.26	□□□□□ -0.45
TRO-223	ENST00000492142	MSL1	Q68DK7	614 aa		12.26	□□□□□ -0.45
TRO-223	ENST00000492142	POTEH	Q6S545	545 aa		12.26	□□□□□ -0.45
TRO-223	ENST00000492142	CHMP4B	Q9H444	224 aa	Known RBP	12.26	□□□□□ -0.45
TRO-223	ENST00000492142	C1orf115	Q9H7X2	142 aa		12.26	□□□□□ -0.45
TRO-223	ENST00000492142	TRMT112	Q9UI30	125 aa	Known RBP	12.26	□□□□□ -0.45
TRO-223	ENST00000492142	UBN2	Q6ZU65	1347 aa		12.26	□□□□□ -0.45
TRO-223	ENST00000492142	BCOR	Q6W2J9	1755 aa		12.25	□□□□□ -0.45
TRO-223	ENST00000492142	PSD	A5PKW4	1024 aa	Predicted RBP	12.25	□□□□□ -0.45
TRO-223	ENST00000492142		H7C1W4	665 aa		12.25	□□□□□ -0.45
TRO-223	ENST00000492142	GNAI3	P08754	354 aa		12.25	□□□□□ -0.45
TRO-223	ENST00000492142	UBTFL1	P0CB47	393 aa	Predicted RBP	12.25	□□□□□ -0.45
TRO-223	ENST00000492142	PARP10	Q53GL7	1025 aa		12.25	□□□□□ -0.45
TRO-223	ENST00000492142	UBE3B	Q7Z3V4	1068 aa		12.25	□□□□□ -0.45
TRO-223	ENST00000492142	SYNE4	Q8N205	404 aa		12.25	□□□□□ -0.45
TRO-223	ENST00000492142	NLGN1	Q8N2Q7	840 aa		12.25	□□□□□ -0.45
TRO-223	ENST00000492142	UTP14A	Q9BVJ6	771 aa	Known RBP	12.25	□□□□□ -0.45
TRO-223	ENST00000492142	ZBTB40	Q9NUA8	1239 aa		12.25	□□□□□ -0.45
TRO-223	ENST00000492142	GNAI2	P04899	355 aa		12.24	□□□□□ -0.45
TRO-223	ENST00000492142	PCCA	P05165	728 aa	Predicted RBP	12.24	□□□□□ -0.45
TRO-223	ENST00000492142	TM4SF1	P30408	202 aa		12.24	□□□□□ -0.45
TRO-223	ENST00000492142	SCN7A	Q01118	1682 aa		12.24	□□□□□ -0.45
TRO-223	ENST00000492142	PPP1R42	Q7Z4L9	355 aa		12.24	□□□□□ -0.45
TRO-223	ENST00000492142	FAM89A	Q96GI7	184 aa		12.24	□□□□□ -0.45
TRO-223	ENST00000492142	GTF3C3	Q9Y5Q9	886 aa		12.24	□□□□□ -0.45
TRO-223	ENST00000492142	ANKRD36C	Q5JPF3	1778 aa		12.23	□□□□□ -0.45
TRO-223	ENST00000492142	UTY	O14607	1347 aa		12.23	□□□□□ -0.45
TRO-223	ENST00000492142	GTF2E1	P29083	439 aa	Predicted RBP	12.23	□□□□□ -0.45
TRO-223	ENST00000492142	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.23	□□□□□ -0.45
TRO-223	ENST00000492142	NUTM1	Q86Y26	1132 aa		12.23	□□□□□ -0.45
TRO-223	ENST00000492142	CCDC24	Q8N4L8	307 aa		12.23	□□□□□ -0.45
TRO-223	ENST00000492142	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.23	□□□□□ -0.45
TRO-223	ENST00000492142	SUCLG2	Q96I99	432 aa		12.23	□□□□□ -0.45
TRO-223	ENST00000492142	LRRFIP2	Q9Y608	721 aa	Known RBP	12.23	□□□□□ -0.45
TRO-223	ENST00000492142	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.23	□□□□□ -0.45
TRO-223	ENST00000492142	NPHP1	O15259	732 aa		12.22	□□□□□ -0.45
TRO-223	ENST00000492142	NTSR2	O95665	410 aa		12.22	□□□□□ -0.45
TRO-223	ENST00000492142	SERPINB2	P05120	415 aa		12.22	□□□□□ -0.45
TRO-223	ENST00000492142	CASP7	P55210	303 aa		12.22	□□□□□ -0.45
TRO-223	ENST00000492142	DDR1	Q08345	913 aa		12.22	□□□□□ -0.45
TRO-223	ENST00000492142	ERFE	Q4G0M1	354 aa		12.22	□□□□□ -0.45
TRO-223	ENST00000492142	TPTE2	Q6XPS3	522 aa		12.22	□□□□□ -0.45
TRO-223	ENST00000492142	PCDHB15	Q9Y5E8	787 aa		12.22	□□□□□ -0.45
TRO-223	ENST00000492142	QSER1	Q2KHR3	1735 aa		12.22	□□□□□ -0.45
TRO-223	ENST00000492142	SH3TC1	Q8TE82	1336 aa		12.21	□□□□□ -0.45
TRO-223	ENST00000492142	IRS4	O14654	1257 aa	Predicted RBP	12.21	□□□□□ -0.45
TRO-223	ENST00000492142	ZBTB7A	O95365	584 aa		12.21	□□□□□ -0.45
TRO-223	ENST00000492142	MMP10	P09238	476 aa		12.21	□□□□□ -0.45
TRO-223	ENST00000492142	HCLS1	P14317	486 aa	Predicted RBP	12.21	□□□□□ -0.45
TRO-223	ENST00000492142	EPHA10	Q5JZY3	1008 aa		12.21	□□□□□ -0.45
TRO-223	ENST00000492142	ERICH6B	Q5W0A0	696 aa		12.21	□□□□□ -0.45
TRO-223	ENST00000492142	SLC16A10	Q8TF71	515 aa		12.21	□□□□□ -0.45
TRO-223	ENST00000492142	NYX	Q9GZU5	481 aa		12.21	□□□□□ -0.45
TRO-223	ENST00000492142	HDAC5	Q9UQL6	1122 aa		12.21	□□□□□ -0.45
TRO-223	ENST00000492142	PARP3	Q9Y6F1	533 aa		12.21	□□□□□ -0.45
TRO-223	ENST00000492142	CARMIL3	Q8ND23	1372 aa		12.2	□□□□□ -0.46
TRO-223	ENST00000492142	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.2	□□□□□ -0.46
TRO-223	ENST00000492142	POLRMT	O00411	1230 aa	Known RBP	12.2	□□□□□ -0.46
TRO-223	ENST00000492142	AAMP	Q13685	434 aa		12.2	□□□□□ -0.46
TRO-223	ENST00000492142	KAZALD1	Q96I82	304 aa		12.2	□□□□□ -0.46
TRO-223	ENST00000492142	BICC1	Q9H694	974 aa	Known RBP	12.2	□□□□□ -0.46
TRO-223	ENST00000492142	CDHR2	Q9BYE9	1310 aa		12.19	□□□□□ -0.46
TRO-223	ENST00000492142	SPDYE2B	A6NHP3	402 aa		12.19	□□□□□ -0.46
TRO-223	ENST00000492142	SPDYE6	P0CI01	402 aa		12.19	□□□□□ -0.46
TRO-223	ENST00000492142	FOXO4	P98177	505 aa		12.19	□□□□□ -0.46
TRO-223	ENST00000492142	MKRN4P	Q13434	485 aa	Predicted RBP	12.19	□□□□□ -0.46
TRO-223	ENST00000492142	SPDYE2	Q495Y8	402 aa		12.19	□□□□□ -0.46
TRO-223	ENST00000492142	CNBD1	Q8NA66	436 aa		12.19	□□□□□ -0.46
TRO-223	ENST00000492142	PPP4R2	Q9NY27	417 aa		12.19	□□□□□ -0.46
TRO-223	ENST00000492142	SOCS7	O14512	581 aa		12.18	□□□□□ -0.46
TRO-223	ENST00000492142	PDE8A	O60658	829 aa		12.18	□□□□□ -0.46
TRO-223	ENST00000492142	ATP8B2	P98198	1209 aa		12.18	□□□□□ -0.46
TRO-223	ENST00000492142	SLC10A5	Q5PT55	438 aa		12.18	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms