RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 GCKRQ14397 625 aa8.72□□□□□ -1.01
NPHP3-208ENST00000490993 LMBR1LQ6UX01 489 aa8.72□□□□□ -1.01
NPHP3-208ENST00000490993 CCDC191Q8NCU4 936 aa8.72□□□□□ -1.01
NPHP3-208ENST00000490993 KCNQ3O43525 872 aa8.72□□□□□ -1.01
NPHP3-208ENST00000490993 BAG4O95429 457 aaKnown RBP8.71□□□□□ -1.01
NPHP3-208ENST00000490993 ZNF496Q96IT1 587 aaPredicted RBP8.71□□□□□ -1.01
NPHP3-208ENST00000490993 PA2G4Q9UQ80 394 aaKnown RBP8.71□□□□□ -1.01
NPHP3-208ENST00000490993 C1orf167Q5SNV9 1468 aa8.71□□□□□ -1.01
NPHP3-208ENST00000490993 NCOA3Q9Y6Q9 1424 aa8.71□□□□□ -1.01
NPHP3-208ENST00000490993 ZFYP08048 801 aaPredicted RBP8.71□□□□□ -1.01
NPHP3-208ENST00000490993 CCDC73Q6ZRK6 1079 aa8.71□□□□□ -1.01
NPHP3-208ENST00000490993 SMARCC1Q92922 1105 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-208ENST00000490993 SAFBQ15424 915 aaKnown RBP eCLIP8.71□□□□□ -1.02
NPHP3-208ENST00000490993 GLIPR1L2Q4G1C9 344 aa8.71□□□□□ -1.02
NPHP3-208ENST00000490993 KLHL40Q2TBA0 621 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 SUCLG2Q96I99 432 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 SPATA31A3Q5VYP0 1347 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 TNS3Q68CZ2 1445 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 NEURL1BA8MQ27 555 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 GOLGA6L19H0YKK7 550 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 SLC5A1P13866 664 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 SASS6Q6UVJ0 657 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 CDKL5O76039 1030 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 DDX17Q92841 729 aaKnown RBP8.7□□□□□ -1.02
NPHP3-208ENST00000490993 CARD10Q9BWT7 1032 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 WDR17Q8IZU2 1322 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 PXDNLA1KZ92 1463 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 UQCRFS1P1P0C7P4 283 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 MCMDC2Q4G0Z9 681 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 CCDC83Q8IWF9 413 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 CFAP45Q9UL16 551 aa8.7□□□□□ -1.02
NPHP3-208ENST00000490993 FAM177BA6PVY3 158 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 HOOK1Q9UJC3 728 aaKnown RBP8.69□□□□□ -1.02
NPHP3-208ENST00000490993 G3V3G9 751 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 SGSM2O43147 1006 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 TOM1O60784 492 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 SLC3A2P08195 630 aaKnown RBP8.69□□□□□ -1.02
NPHP3-208ENST00000490993 DCAF8Q5TAQ9 597 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 BTG4Q9NY30 223 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 RBM8AQ9Y5S9 174 aaKnown RBP8.69□□□□□ -1.02
NPHP3-208ENST00000490993 FIBPO43427 364 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 ADAMTS2O95450 1211 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 XBP1P17861 261 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 HMGN5P82970 282 aaKnown RBP8.69□□□□□ -1.02
NPHP3-208ENST00000490993 POLA2Q14181 598 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 VPS53Q5VIR6 699 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 LDHAL6AQ6ZMR3 332 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 CCDC39Q9UFE4 941 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 GOLIM4O00461 696 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 TPM3P06753 285 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 NMIQ13287 307 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-208ENST00000490993 NEK1Q96PY6 1258 aa8.69□□□□□ -1.02
NPHP3-208ENST00000490993 TFCP2Q12800 502 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 STK3Q13188 491 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 FAM43AQ8N2R8 423 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 BECN2A8MW95 431 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 PIP4K2BP78356 416 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 DDB1Q16531 1140 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 STX6O43752 255 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 MAP3K12Q12852 859 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 TNNI3KQ59H18 835 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 AIDAQ96BJ3 306 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 SCAND2PQ9GZW5 306 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-208ENST00000490993 FPGT-TNNI3KV9GXZ4 949 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 C3P01024 1663 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 MON2Q7Z3U7 1717 aa8.68□□□□□ -1.02
NPHP3-208ENST00000490993 CCDC85AQ96PX6 553 aaPredicted RBP8.67□□□□□ -1.02
NPHP3-208ENST00000490993 HELLSQ9NRZ9 838 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 CCDC171Q6TFL3 1326 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 OVOS2A0A0G2JMS6 1433 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 DCCP43146 1447 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 KIF13AQ9H1H9 1805 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 GPTP24298 496 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 HSPA4P34932 840 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 JARID2Q92833 1246 aaPredicted RBP8.67□□□□□ -1.02
NPHP3-208ENST00000490993 CDC5LQ99459 802 aaKnown RBP8.67□□□□□ -1.02
NPHP3-208ENST00000490993 PAG1Q9NWQ8 432 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 EYA2O00167 538 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 IDH1O75874 414 aaKnown RBP8.67□□□□□ -1.02
NPHP3-208ENST00000490993 NAT10Q9H0A0 1025 aaKnown RBP8.67□□□□□ -1.02
NPHP3-208ENST00000490993 CCDC192P0DO97 292 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 GJB2P29033 226 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 PIP4K2AP48426 406 aaPredicted RBP8.67□□□□□ -1.02
NPHP3-208ENST00000490993 CCDC152Q4G0S7 254 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 SPATA32Q96LK8 384 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 LMTK3Q96Q04 1460 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 CEMIPQ8WUJ3 1361 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 CREB3L3Q68CJ9 461 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 JMYQ8N9B5 988 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 BRMS1Q9HCU9 246 aa8.67□□□□□ -1.02
NPHP3-208ENST00000490993 ZSCAN22P10073 491 aaPredicted RBP8.66□□□□□ -1.02
NPHP3-208ENST00000490993 MTX1Q13505 466 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 ATP2B3Q16720 1220 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 CAVIN4Q5BKX8 364 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 BRINP3Q76B58 766 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 RUFY3Q7L099 469 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 WASF1Q92558 559 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 BRPF3Q9ULD4 1205 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 CCDC69A6NI79 296 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 ZNF213O14771 459 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms