RNA–Protein interactions for RNA: ENST00000490821.1

ALMS1-205, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-205ENST00000490821 SAPCD2Q86UD0 394 aa10.64□□□□□ -0.71
ALMS1-205ENST00000490821 NBPF5PQ86XG9 351 aaPredicted RBP10.64□□□□□ -0.71
ALMS1-205ENST00000490821 DZIP3Q86Y13 1208 aaKnown RBP10.64□□□□□ -0.71
ALMS1-205ENST00000490821 PSMD1Q99460 953 aa10.64□□□□□ -0.71
ALMS1-205ENST00000490821 TEX13AQ9BXU3 409 aaPredicted RBP10.64□□□□□ -0.71
ALMS1-205ENST00000490821 PANK3Q9H999 370 aa10.64□□□□□ -0.71
ALMS1-205ENST00000490821 GJA3Q9Y6H8 435 aa10.64□□□□□ -0.71
ALMS1-205ENST00000490821 LMOD1P29536 600 aaPredicted RBP10.63□□□□□ -0.71
ALMS1-205ENST00000490821 USP50Q70EL3 339 aaPredicted RBP10.63□□□□□ -0.71
ALMS1-205ENST00000490821 MORC1Q86VD1 984 aa10.63□□□□□ -0.71
ALMS1-205ENST00000490821 POLR3GLQ9BT43 218 aa10.63□□□□□ -0.71
ALMS1-205ENST00000490821 PIP4K2AP48426 406 aaPredicted RBP10.62□□□□□ -0.71
ALMS1-205ENST00000490821 EIF6P56537 245 aaKnown RBP10.62□□□□□ -0.71
ALMS1-205ENST00000490821 CIAPIN1Q6FI81 312 aa10.62□□□□□ -0.71
ALMS1-205ENST00000490821 CLEC4GQ6UXB4 293 aa10.62□□□□□ -0.71
ALMS1-205ENST00000490821 IL17REQ8NFR9 667 aa10.62□□□□□ -0.71
ALMS1-205ENST00000490821 JDP2Q8WYK2 163 aa10.62□□□□□ -0.71
ALMS1-205ENST00000490821 HHIPL1Q96JK4 782 aa10.62□□□□□ -0.71
ALMS1-205ENST00000490821 CELF2O95319 508 aaKnown RBP10.61□□□□□ -0.71
ALMS1-205ENST00000490821 SOX10P56693 466 aa10.61□□□□□ -0.71
ALMS1-205ENST00000490821 PRPF38BQ5VTL8 546 aaKnown RBP10.61□□□□□ -0.71
ALMS1-205ENST00000490821 SLC51AQ86UW1 340 aa10.61□□□□□ -0.71
ALMS1-205ENST00000490821 ZIC5Q96T25 663 aa10.61□□□□□ -0.71
ALMS1-205ENST00000490821 MKI67P46013 3256 aaKnown RBP10.61□□□□□ -0.71
ALMS1-205ENST00000490821 POLR2AP24928 1970 aaKnown RBP10.6□□□□□ -0.71
ALMS1-205ENST00000490821 KCNQ3O43525 872 aa10.6□□□□□ -0.71
ALMS1-205ENST00000490821 ALDH1B1P30837 517 aa10.6□□□□□ -0.71
ALMS1-205ENST00000490821 CRY2Q49AN0 593 aa10.6□□□□□ -0.71
ALMS1-205ENST00000490821 TPTE2Q6XPS3 522 aa10.6□□□□□ -0.71
ALMS1-205ENST00000490821 NPM2Q86SE8 214 aaKnown RBP10.6□□□□□ -0.71
ALMS1-205ENST00000490821 FMNL2Q96PY5 1086 aa10.6□□□□□ -0.71
ALMS1-205ENST00000490821 AKAP11Q9UKA4 1901 aa10.6□□□□□ -0.71
ALMS1-205ENST00000490821 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.713e-6■□□□□ 11.2
ALMS1-205ENST00000490821 TEFQ10587 303 aa10.59□□□□□ -0.71
ALMS1-205ENST00000490821 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
ALMS1-205ENST00000490821 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
ALMS1-205ENST00000490821 GLIS2Q9BZE0 524 aaPredicted RBP10.59□□□□□ -0.71
ALMS1-205ENST00000490821 GPRC5DQ9NZD1 345 aa10.59□□□□□ -0.71
ALMS1-205ENST00000490821 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
ALMS1-205ENST00000490821 ZNF652Q9Y2D9 606 aa10.59□□□□□ -0.71
ALMS1-205ENST00000490821 USP16Q9Y5T5 823 aa10.59□□□□□ -0.71
ALMS1-205ENST00000490821 ABCC12Q96J65 1359 aa10.59□□□□□ -0.71
ALMS1-205ENST00000490821 NUP98P52948 1817 aa10.58□□□□□ -0.72
ALMS1-205ENST00000490821 CEMIPQ8WUJ3 1361 aa10.58□□□□□ -0.72
ALMS1-205ENST00000490821 PRAMEF22A3QJZ6 481 aa10.58□□□□□ -0.72
ALMS1-205ENST00000490821 FAM177BA6PVY3 158 aa10.58□□□□□ -0.72
ALMS1-205ENST00000490821 RGL2O15211 777 aa10.58□□□□□ -0.72
ALMS1-205ENST00000490821 CC2D2BQ6DHV5 1058 aa10.58□□□□□ -0.72
ALMS1-205ENST00000490821 LARGE2Q8N3Y3 721 aa10.58□□□□□ -0.72
ALMS1-205ENST00000490821 ADARB2Q9NS39 739 aaKnown RBP10.58□□□□□ -0.72
ALMS1-205ENST00000490821 PGAP2Q9UHJ9 254 aa10.58□□□□□ -0.72
ALMS1-205ENST00000490821 GNAT3A8MTJ3 354 aa10.57□□□□□ -0.72
ALMS1-205ENST00000490821 NOGQ13253 232 aa10.57□□□□□ -0.72
ALMS1-205ENST00000490821 RIC1Q4ADV7 1423 aa10.57□□□□□ -0.72
ALMS1-205ENST00000490821 NBPF26B4DH59 902 aa10.56□□□□□ -0.72
ALMS1-205ENST00000490821 HLFQ16534 295 aa10.56□□□□□ -0.72
ALMS1-205ENST00000490821 AMER1Q5JTC6 1135 aaPredicted RBP10.56□□□□□ -0.72
ALMS1-205ENST00000490821 NBPF10Q6P3W6 841 aaKnown RBP10.56□□□□□ -0.72
ALMS1-205ENST00000490821 NBPF15Q8N660 670 aa10.56□□□□□ -0.72
ALMS1-205ENST00000490821 ZNF408Q9H9D4 720 aa10.56□□□□□ -0.72
ALMS1-205ENST00000490821 NPC1L1Q9UHC9 1359 aa10.55□□□□□ -0.72
ALMS1-205ENST00000490821 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
ALMS1-205ENST00000490821 FAM155AB1AL88 458 aaPredicted RBP10.55□□□□□ -0.72
ALMS1-205ENST00000490821 DIAPH1O60610 1272 aaKnown RBP10.55□□□□□ -0.72
ALMS1-205ENST00000490821 HOXA10P31260 410 aaPredicted RBP10.55□□□□□ -0.72
ALMS1-205ENST00000490821 HIRAP54198 1017 aaPredicted RBP10.55□□□□□ -0.72
ALMS1-205ENST00000490821 CXCL9Q07325 125 aa10.55□□□□□ -0.72
ALMS1-205ENST00000490821 GRIPAP1Q4V328 841 aa10.55□□□□□ -0.72
ALMS1-205ENST00000490821 NUTM1Q86Y26 1132 aa10.55□□□□□ -0.72
ALMS1-205ENST00000490821 NIM1KQ8IY84 436 aa10.55□□□□□ -0.72
ALMS1-205ENST00000490821 COL3A1P02461 1466 aaPredicted RBP10.55□□□□□ -0.72
ALMS1-205ENST00000490821 PPIP5K2O43314 1243 aa10.54□□□□□ -0.72
ALMS1-205ENST00000490821 GMPSP49915 693 aaPredicted RBP10.54□□□□□ -0.72
ALMS1-205ENST00000490821 AOC3Q16853 763 aa10.54□□□□□ -0.72
ALMS1-205ENST00000490821 DLK2Q6UY11 383 aa10.54□□□□□ -0.72
ALMS1-205ENST00000490821 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
ALMS1-205ENST00000490821 TRPM4Q8TD43 1214 aa10.54□□□□□ -0.72
ALMS1-205ENST00000490821 ZC3H15Q8WU90 426 aaKnown RBP10.54□□□□□ -0.72
ALMS1-205ENST00000490821 SAGE1Q9NXZ1 904 aa10.54□□□□□ -0.72
ALMS1-205ENST00000490821 BRCA2P51587 3418 aa10.54□□□□□ -0.72
ALMS1-205ENST00000490821 KIF7Q2M1P5 1343 aa10.54□□□□□ -0.72
ALMS1-205ENST00000490821 CENPFP49454 3210 aa10.53□□□□□ -0.72
ALMS1-205ENST00000490821 LAMB4A4D0S4 1761 aa10.53□□□□□ -0.72
ALMS1-205ENST00000490821 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
ALMS1-205ENST00000490821 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
ALMS1-205ENST00000490821 HUNKP57058 714 aa10.53□□□□□ -0.72
ALMS1-205ENST00000490821 CDC37L1Q7L3B6 337 aa10.53□□□□□ -0.72
ALMS1-205ENST00000490821 KNSTRNQ9Y448 316 aa10.53□□□□□ -0.72
ALMS1-205ENST00000490821 CDHR2Q9BYE9 1310 aa10.53□□□□□ -0.72
ALMS1-205ENST00000490821 KIAA0100Q14667 2235 aaKnown RBP10.53□□□□□ -0.72
ALMS1-205ENST00000490821 SZT2Q5T011 3432 aa10.52□□□□□ -0.72
ALMS1-205ENST00000490821 SHTN1A0MZ66 631 aa10.52□□□□□ -0.73
ALMS1-205ENST00000490821 TCERG1O14776 1098 aaKnown RBP10.52□□□□□ -0.73
ALMS1-205ENST00000490821 PPEF1O14829 653 aaPredicted RBP10.52□□□□□ -0.73
ALMS1-205ENST00000490821 SNRPA1P09661 255 aaKnown RBP10.52□□□□□ -0.73
ALMS1-205ENST00000490821 KIF23Q02241 960 aaPredicted RBP10.52□□□□□ -0.73
ALMS1-205ENST00000490821 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
ALMS1-205ENST00000490821 RPGRQ92834 1020 aaKnown RBP10.52□□□□□ -0.73
ALMS1-205ENST00000490821 CRAMP1Q96RY5 1269 aa10.52□□□□□ -0.73
ALMS1-205ENST00000490821 RNF186Q9NXI6 227 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms