RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ATP10DQ9P241 1426 aa9.9□□□□□ -0.83
CLDN1-202ENST00000490800 POLRMTO00411 1230 aaKnown RBP9.89□□□□□ -0.83
CLDN1-202ENST00000490800 FCHSD2O94868 740 aa9.89□□□□□ -0.83
CLDN1-202ENST00000490800 STARD3NLO95772 234 aa9.89□□□□□ -0.83
CLDN1-202ENST00000490800 ARHGAP27Q6ZUM4 889 aa9.89□□□□□ -0.83
CLDN1-202ENST00000490800 RUNDC1Q96C34 613 aa9.89□□□□□ -0.83
CLDN1-202ENST00000490800 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
CLDN1-202ENST00000490800 COL5A3P25940 1745 aaPredicted RBP9.89□□□□□ -0.83
CLDN1-202ENST00000490800 PXDNLA1KZ92 1463 aa9.89□□□□□ -0.83
CLDN1-202ENST00000490800 CICQ96RK0 1608 aaPredicted RBP9.89□□□□□ -0.83
CLDN1-202ENST00000490800 POTEB2H3BUK9 544 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 APAF1O14727 1248 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 KCNQ3O43525 872 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 OSBPP22059 807 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 CHRNA5P30532 468 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 NFIXQ14938 502 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 KRI1Q8N9T8 703 aaKnown RBP9.88□□□□□ -0.83
CLDN1-202ENST00000490800 PLEKHF1Q96S99 279 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 BCL2L12Q9HB09 334 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 PLSCR2Q9NRY7 297 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 PIM2Q9P1W9 311 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 SALL2Q9Y467 1007 aaPredicted RBP9.88□□□□□ -0.83
CLDN1-202ENST00000490800 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 C10orf71Q711Q0 1435 aa9.88□□□□□ -0.83
CLDN1-202ENST00000490800 TJP1Q07157 1748 aa9.87□□□□□ -0.83
CLDN1-202ENST00000490800 KCPQ6ZWJ8 1503 aa9.87□□□□□ -0.83
CLDN1-202ENST00000490800 MRC1P22897 1456 aa9.87□□□□□ -0.83
CLDN1-202ENST00000490800 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
CLDN1-202ENST00000490800 A1BGP04217 495 aa9.87□□□□□ -0.83
CLDN1-202ENST00000490800 EIF5P55010 431 aaKnown RBP9.87□□□□□ -0.83
CLDN1-202ENST00000490800 SLAIN1Q8ND83 568 aa9.87□□□□□ -0.83
CLDN1-202ENST00000490800 FMNL2Q96PY5 1086 aa9.87□□□□□ -0.83
CLDN1-202ENST00000490800 TEX13AQ9BXU3 409 aaPredicted RBP9.87□□□□□ -0.83
CLDN1-202ENST00000490800 COL15A1P39059 1388 aa9.87□□□□□ -0.83
CLDN1-202ENST00000490800 HEG1Q9ULI3 1381 aa9.87□□□□□ -0.83
CLDN1-202ENST00000490800 SERPINB2P05120 415 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 C4AP0C0L4 1744 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 DCTN1Q14203 1278 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 DALRD3Q5D0E6 543 aaKnown RBP9.86□□□□□ -0.83
CLDN1-202ENST00000490800 BICDL1Q6ZP65 573 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 MCM10Q7L590 875 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 NGEFQ8N5V2 710 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 RTF1Q92541 710 aaKnown RBP9.86□□□□□ -0.83
CLDN1-202ENST00000490800 SCUBE2Q9NQ36 999 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 TBC1D2BQ9UPU7 963 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 ZNF330Q9Y3S2 320 aaPredicted RBP9.86□□□□□ -0.83
CLDN1-202ENST00000490800 ADCY9O60503 1353 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 CEMIPQ8WUJ3 1361 aa9.86□□□□□ -0.83
CLDN1-202ENST00000490800 ZNF521Q96K83 1311 aa9.85□□□□□ -0.83
CLDN1-202ENST00000490800 A0A087WZG4 1122 aa9.85□□□□□ -0.83
CLDN1-202ENST00000490800 GPR37O15354 613 aa9.85□□□□□ -0.83
CLDN1-202ENST00000490800 BRPF1P55201 1214 aaPredicted RBP9.85□□□□□ -0.83
CLDN1-202ENST00000490800 NEUROD2Q15784 382 aa9.85□□□□□ -0.83
CLDN1-202ENST00000490800 PNNQ9H307 717 aaKnown RBP9.85□□□□□ -0.83
CLDN1-202ENST00000490800 USP16Q9Y5T5 823 aa9.85□□□□□ -0.83
CLDN1-202ENST00000490800 ADAMTS7Q9UKP4 1686 aa9.84□□□□□ -0.83
CLDN1-202ENST00000490800 N4BP2Q86UW6 1770 aaPredicted RBP9.84□□□□□ -0.83
CLDN1-202ENST00000490800 PRAMEF22A3QJZ6 481 aa9.84□□□□□ -0.83
CLDN1-202ENST00000490800 IL6STP40189 918 aaPredicted RBP9.84□□□□□ -0.83
CLDN1-202ENST00000490800 TBC1D9BQ66K14 1250 aa9.84□□□□□ -0.83
CLDN1-202ENST00000490800 NPM2Q86SE8 214 aaKnown RBP9.84□□□□□ -0.83
CLDN1-202ENST00000490800 RRP7AQ9Y3A4 280 aaKnown RBP9.84□□□□□ -0.83
CLDN1-202ENST00000490800 HTATSF1O43719 755 aaKnown RBP9.83□□□□□ -0.84
CLDN1-202ENST00000490800 PIP4K2AP48426 406 aaPredicted RBP9.83□□□□□ -0.84
CLDN1-202ENST00000490800 C9orf131Q5VYM1 1079 aa9.83□□□□□ -0.84
CLDN1-202ENST00000490800 CCDC24Q8N4L8 307 aa9.83□□□□□ -0.84
CLDN1-202ENST00000490800 CDCA7LQ96GN5 454 aa9.83□□□□□ -0.84
CLDN1-202ENST00000490800 MIS18AQ9NYP9 233 aa9.83□□□□□ -0.84
CLDN1-202ENST00000490800 KIF13BQ9NQT8 1826 aa9.83□□□□□ -0.84
CLDN1-202ENST00000490800 MAPK8IP3Q9UPT6 1336 aa9.82□□□□□ -0.84
CLDN1-202ENST00000490800 KIAA1551Q9HCM1 1747 aa9.82□□□□□ -0.84
CLDN1-202ENST00000490800 SNRPA1P09661 255 aaKnown RBP9.82□□□□□ -0.84
CLDN1-202ENST00000490800 TMPOP42166 694 aaKnown RBP9.82□□□□□ -0.84
CLDN1-202ENST00000490800 TAF7Q15545 349 aaPredicted RBP9.82□□□□□ -0.84
CLDN1-202ENST00000490800 DOK7Q18PE1 504 aa9.82□□□□□ -0.84
CLDN1-202ENST00000490800 CCDC27Q2M243 656 aa9.82□□□□□ -0.84
CLDN1-202ENST00000490800 C2CD5Q86YS7 1000 aa9.82□□□□□ -0.84
CLDN1-202ENST00000490800 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
CLDN1-202ENST00000490800 H0YIN7 160 aa9.81□□□□□ -0.84
CLDN1-202ENST00000490800 CAMTA2O94983 1202 aa9.81□□□□□ -0.84
CLDN1-202ENST00000490800 NEFMP07197 916 aa9.81□□□□□ -0.84
CLDN1-202ENST00000490800 MAMSTRQ6ZN01 415 aa9.81□□□□□ -0.84
CLDN1-202ENST00000490800 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
CLDN1-202ENST00000490800 TTLL6Q8N841 843 aa9.81□□□□□ -0.84
CLDN1-202ENST00000490800 VIRMAQ69YN4 1812 aaKnown RBP9.8□□□□□ -0.84
CLDN1-202ENST00000490800 MAP3K7O43318 606 aa9.8□□□□□ -0.84
CLDN1-202ENST00000490800 NFE2L2Q16236 605 aa9.8□□□□□ -0.84
CLDN1-202ENST00000490800 PRR5LQ6MZQ0 368 aa9.8□□□□□ -0.84
CLDN1-202ENST00000490800 SETDB2Q96T68 719 aa9.8□□□□□ -0.84
CLDN1-202ENST00000490800 BRIP1Q9BX63 1249 aa9.8□□□□□ -0.84
CLDN1-202ENST00000490800 NMRK2Q9NPI5 230 aa9.8□□□□□ -0.84
CLDN1-202ENST00000490800 RNF181Q9P0P0 153 aa9.8□□□□□ -0.84
CLDN1-202ENST00000490800 UBR2Q8IWV8 1755 aa9.8□□□□□ -0.84
CLDN1-202ENST00000490800 CARMIL3Q8ND23 1372 aa9.79□□□□□ -0.84
CLDN1-202ENST00000490800 NBPF26B4DH59 902 aa9.79□□□□□ -0.84
CLDN1-202ENST00000490800 RIMBP2O15034 1052 aa9.79□□□□□ -0.84
CLDN1-202ENST00000490800 HOXB3P14651 431 aaPredicted RBP9.79□□□□□ -0.84
CLDN1-202ENST00000490800 RIPK4P57078 832 aa9.79□□□□□ -0.84
CLDN1-202ENST00000490800 SLFN5Q08AF3 891 aa9.79□□□□□ -0.84
CLDN1-202ENST00000490800 NBPF10Q6P3W6 841 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms