RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 TUBGCP6Q96RT7 1819 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 UTYO14607 1347 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.25
SNX12-205ENST00000490561 GYS1P13807 737 aa16.64■□□□□ 0.25
SNX12-205ENST00000490561 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
SNX12-205ENST00000490561 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
SNX12-205ENST00000490561 NYXQ9GZU5 481 aa16.64■□□□□ 0.25
SNX12-205ENST00000490561 ZBTB40Q9NUA8 1239 aa16.64■□□□□ 0.25
SNX12-205ENST00000490561 GNAI2P04899 355 aa16.63■□□□□ 0.25
SNX12-205ENST00000490561 USP44Q9H0E7 712 aa16.63■□□□□ 0.25
SNX12-205ENST00000490561 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
SNX12-205ENST00000490561 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
SNX12-205ENST00000490561 PCCAP05165 728 aaPredicted RBP16.62■□□□□ 0.25
SNX12-205ENST00000490561 GPTP24298 496 aa16.62■□□□□ 0.25
SNX12-205ENST00000490561 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
SNX12-205ENST00000490561 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
SNX12-205ENST00000490561 MEIS3Q99687 375 aa16.62■□□□□ 0.25
SNX12-205ENST00000490561 UTP14AQ9BVJ6 771 aaKnown RBP16.62■□□□□ 0.25
SNX12-205ENST00000490561 H7C1W4 665 aa16.61■□□□□ 0.25
SNX12-205ENST00000490561 TBC1D9BQ66K14 1250 aa16.61■□□□□ 0.25
SNX12-205ENST00000490561 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
SNX12-205ENST00000490561 UBN2Q6ZU65 1347 aa16.61■□□□□ 0.25
SNX12-205ENST00000490561 CDHR2Q9BYE9 1310 aa16.61■□□□□ 0.25
SNX12-205ENST00000490561 COL24A1Q17RW2 1714 aa16.59■□□□□ 0.25
SNX12-205ENST00000490561 NBPF7P0C2Y1 421 aaPredicted RBP16.59■□□□□ 0.25
SNX12-205ENST00000490561 NFIXQ14938 502 aa16.59■□□□□ 0.25
SNX12-205ENST00000490561 TPTE2Q6XPS3 522 aa16.59■□□□□ 0.25
SNX12-205ENST00000490561 SH3TC1Q8TE82 1336 aa16.59■□□□□ 0.25
SNX12-205ENST00000490561 NTSR2O95665 410 aa16.58■□□□□ 0.24
SNX12-205ENST00000490561 TM4SF1P30408 202 aa16.58■□□□□ 0.24
SNX12-205ENST00000490561 SUSD4Q5VX71 490 aa16.58■□□□□ 0.24
SNX12-205ENST00000490561 BICDL1Q6ZP65 573 aa16.58■□□□□ 0.24
SNX12-205ENST00000490561 UBE3BQ7Z3V4 1068 aa16.58■□□□□ 0.24
SNX12-205ENST00000490561 NBPF5PQ86XG9 351 aaPredicted RBP16.58■□□□□ 0.24
SNX12-205ENST00000490561 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.24
SNX12-205ENST00000490561 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.24
SNX12-205ENST00000490561 PPP4R2Q9NY27 417 aa16.58■□□□□ 0.24
SNX12-205ENST00000490561 GTF2E1P29083 439 aaPredicted RBP16.57■□□□□ 0.24
SNX12-205ENST00000490561 CASP7P55210 303 aa16.57■□□□□ 0.24
SNX12-205ENST00000490561 LRRFIP2Q9Y608 721 aaKnown RBP16.57■□□□□ 0.24
SNX12-205ENST00000490561 HMMRO75330 724 aa16.56■□□□□ 0.24
SNX12-205ENST00000490561 PARP3Q9Y6F1 533 aa16.56■□□□□ 0.24
SNX12-205ENST00000490561 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
SNX12-205ENST00000490561 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
SNX12-205ENST00000490561 NPHP1O15259 732 aa16.55■□□□□ 0.24
SNX12-205ENST00000490561 ST5P78524 1137 aa16.55■□□□□ 0.24
SNX12-205ENST00000490561 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
SNX12-205ENST00000490561 FAM89AQ96GI7 184 aa16.55■□□□□ 0.24
SNX12-205ENST00000490561 SUCLG2Q96I99 432 aa16.55■□□□□ 0.24
SNX12-205ENST00000490561 GTF3C3Q9Y5Q9 886 aa16.55■□□□□ 0.24
SNX12-205ENST00000490561 POLRMTO00411 1230 aaKnown RBP16.54■□□□□ 0.24
SNX12-205ENST00000490561 PDE8AO60658 829 aa16.54■□□□□ 0.24
SNX12-205ENST00000490561 SERPINB2P05120 415 aa16.54■□□□□ 0.24
SNX12-205ENST00000490561 MTX1Q13505 466 aa16.54■□□□□ 0.24
SNX12-205ENST00000490561 R3HDM1Q15032 1099 aaKnown RBP16.54■□□□□ 0.24
SNX12-205ENST00000490561 SLC10A5Q5PT55 438 aa16.54■□□□□ 0.24
SNX12-205ENST00000490561 ANKRD44Q8N8A2 993 aa16.54■□□□□ 0.24
SNX12-205ENST00000490561 FAM177BA6PVY3 158 aa16.53■□□□□ 0.24
SNX12-205ENST00000490561 MMP10P09238 476 aa16.53■□□□□ 0.24
SNX12-205ENST00000490561 ATP8B2P98198 1209 aa16.53■□□□□ 0.24
SNX12-205ENST00000490561 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
SNX12-205ENST00000490561 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
SNX12-205ENST00000490561 MTFR1LQ9H019 292 aa16.53■□□□□ 0.24
SNX12-205ENST00000490561 RWDD1Q9H446 243 aaPredicted RBP16.53■□□□□ 0.24
SNX12-205ENST00000490561 BICC1Q9H694 974 aaKnown RBP16.53■□□□□ 0.24
SNX12-205ENST00000490561 C1orf115Q9H7X2 142 aa16.53■□□□□ 0.24
SNX12-205ENST00000490561 CASZ1Q86V15 1759 aa16.53■□□□□ 0.24
SNX12-205ENST00000490561 LAMB2P55268 1798 aa16.52■□□□□ 0.24
SNX12-205ENST00000490561 DDR1Q08345 913 aa16.52■□□□□ 0.24
SNX12-205ENST00000490561 HDAC1Q13547 482 aaPredicted RBP16.52■□□□□ 0.24
SNX12-205ENST00000490561 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.24
SNX12-205ENST00000490561 CCDC136Q96JN2 1154 aa16.52■□□□□ 0.24
SNX12-205ENST00000490561 PCDHB15Q9Y5E8 787 aa16.52■□□□□ 0.24
SNX12-205ENST00000490561 CTSWP56202 376 aa16.51■□□□□ 0.23
SNX12-205ENST00000490561 FOXO4P98177 505 aa16.51■□□□□ 0.23
SNX12-205ENST00000490561 ERFEQ4G0M1 354 aa16.51■□□□□ 0.23
SNX12-205ENST00000490561 MSL1Q68DK7 614 aa16.51■□□□□ 0.23
SNX12-205ENST00000490561 PRR5LQ6MZQ0 368 aa16.51■□□□□ 0.23
SNX12-205ENST00000490561 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
SNX12-205ENST00000490561 KAZALD1Q96I82 304 aa16.51■□□□□ 0.23
SNX12-205ENST00000490561 CSF1RP07333 972 aa16.5■□□□□ 0.23
SNX12-205ENST00000490561 POLD1P28340 1107 aa16.5■□□□□ 0.23
SNX12-205ENST00000490561 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
SNX12-205ENST00000490561 SSH3Q8TE77 659 aa16.5■□□□□ 0.23
SNX12-205ENST00000490561 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
SNX12-205ENST00000490561 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
SNX12-205ENST00000490561 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
SNX12-205ENST00000490561 RTL9Q8NET4 1388 aa16.5■□□□□ 0.23
SNX12-205ENST00000490561 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
SNX12-205ENST00000490561 LMBR1LQ6UX01 489 aa16.49■□□□□ 0.23
SNX12-205ENST00000490561 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
SNX12-205ENST00000490561 HCLS1P14317 486 aaPredicted RBP16.48■□□□□ 0.23
SNX12-205ENST00000490561 POLA2Q14181 598 aa16.48■□□□□ 0.23
SNX12-205ENST00000490561 SF3B3Q15393 1217 aaKnown RBP16.48■□□□□ 0.23
SNX12-205ENST00000490561 EPHA10Q5JZY3 1008 aa16.48■□□□□ 0.23
SNX12-205ENST00000490561 ABCC12Q96J65 1359 aa16.48■□□□□ 0.23
SNX12-205ENST00000490561 DDX60Q8IY21 1712 aaKnown RBP16.48■□□□□ 0.23
SNX12-205ENST00000490561 PDE6BP35913 854 aa16.47■□□□□ 0.23
SNX12-205ENST00000490561 CCDC57Q2TAC2 916 aa16.47■□□□□ 0.23
SNX12-205ENST00000490561 HSP90AB4PQ58FF6 505 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms