RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 ANKLE2Q86XL3 938 aa6.94□□□□□ -1.3
IFRD1-215ENST00000489994 EPS8L1Q8TE68 723 aa6.94□□□□□ -1.3
IFRD1-215ENST00000489994 FOXJ1Q92949 421 aa6.94□□□□□ -1.3
IFRD1-215ENST00000489994 GEMIN8Q9NWZ8 242 aaKnown RBP6.94□□□□□ -1.3
IFRD1-215ENST00000489994 NUB1Q9Y5A7 615 aa6.94□□□□□ -1.3
IFRD1-215ENST00000489994 DHX29Q7Z478 1369 aaKnown RBP6.94□□□□□ -1.3
IFRD1-215ENST00000489994 ZNF644Q9H582 1327 aaPredicted RBP6.93□□□□□ -1.3
IFRD1-215ENST00000489994 VGLL3A8MV65 326 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 ALDH1A1P00352 501 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 POLD1P28340 1107 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 SLC20A2Q08357 652 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 NBPF6Q5VWK0 638 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 TRAF7Q6Q0C0 670 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 NBPF5PQ86XG9 351 aaPredicted RBP6.93□□□□□ -1.3
IFRD1-215ENST00000489994 MKL1Q969V6 931 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 NBPF4Q96M43 638 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 CFDP1Q9UEE9 299 aaPredicted RBP6.93□□□□□ -1.3
IFRD1-215ENST00000489994 CEP152O94986 1710 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 NLRP1Q9C000 1473 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 MIA2Q96PC5 1412 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 NBPF10Q6P3W6 841 aaKnown RBP6.93□□□□□ -1.3
IFRD1-215ENST00000489994 KRBA2Q6ZNG9 492 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 TBC1D9Q6ZT07 1266 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 THEMISQ8N1K5 641 aaPredicted RBP6.93□□□□□ -1.3
IFRD1-215ENST00000489994 MPNDQ8N594 471 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 BSDC1Q9NW68 430 aaPredicted RBP6.93□□□□□ -1.3
IFRD1-215ENST00000489994 FEZ2Q9UHY8 353 aaPredicted RBP6.93□□□□□ -1.3
IFRD1-215ENST00000489994 WASF2Q9Y6W5 498 aa6.93□□□□□ -1.3
IFRD1-215ENST00000489994 RTEL1-TNFRSF6BF6WH68 1400 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 CCNB3Q8WWL7 1395 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 J3QL48 77 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 ATP9BO43861 1147 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 TNNT2P45379 298 aaPredicted RBP6.92□□□□□ -1.3
IFRD1-215ENST00000489994 PTK2Q05397 1052 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 POTEAQ6S8J7 498 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 SH3BP5LQ7L8J4 393 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 SH3RF1Q7Z6J0 888 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 RAI14Q9P0K7 980 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 SUGT1Q9Y2Z0 365 aa6.92□□□□□ -1.3
IFRD1-215ENST00000489994 MAGEB6P1A0A0J9YX57 407 aa6.91□□□□□ -1.3
IFRD1-215ENST00000489994 KIF3BO15066 747 aa6.91□□□□□ -1.3
IFRD1-215ENST00000489994 SMPD1P17405 629 aa6.91□□□□□ -1.3
IFRD1-215ENST00000489994 MAP2K1Q02750 393 aaPredicted RBP6.91□□□□□ -1.3
IFRD1-215ENST00000489994 FOXD4Q12950 439 aaPredicted RBP6.91□□□□□ -1.3
IFRD1-215ENST00000489994 LONRF3Q496Y0 759 aa6.91□□□□□ -1.3
IFRD1-215ENST00000489994 MSL3Q8N5Y2 521 aaKnown RBP6.91□□□□□ -1.3
IFRD1-215ENST00000489994 ARHGAP9Q9BRR9 750 aa6.91□□□□□ -1.3
IFRD1-215ENST00000489994 GNEQ9Y223 722 aaKnown RBP6.91□□□□□ -1.3
IFRD1-215ENST00000489994 GPSM3Q9Y4H4 160 aa6.91□□□□□ -1.3
IFRD1-215ENST00000489994 WASHC2AQ641Q2 1341 aa6.91□□□□□ -1.3
IFRD1-215ENST00000489994 ZNF500O60304 480 aaPredicted RBP6.9□□□□□ -1.3
IFRD1-215ENST00000489994 AVPP01185 164 aa6.9□□□□□ -1.3
IFRD1-215ENST00000489994 CTC1Q2NKJ3 1217 aa6.9□□□□□ -1.3
IFRD1-215ENST00000489994 C4orf48Q5BLP8 95 aa6.9□□□□□ -1.3
IFRD1-215ENST00000489994 DNTTIP2Q5QJE6 756 aaKnown RBP6.9□□□□□ -1.3
IFRD1-215ENST00000489994 ZBTB33Q86T24 672 aa6.9□□□□□ -1.3
IFRD1-215ENST00000489994 TLL2Q9Y6L7 1015 aa6.9□□□□□ -1.3
IFRD1-215ENST00000489994 ROBO1Q9Y6N7 1651 aa6.9□□□□□ -1.3
IFRD1-215ENST00000489994 ARID5BQ14865 1188 aa6.9□□□□□ -1.31
IFRD1-215ENST00000489994 ZKSCAN8Q15776 578 aaPredicted RBP6.9□□□□□ -1.31
IFRD1-215ENST00000489994 CARD14Q9BXL6 1004 aa6.9□□□□□ -1.31
IFRD1-215ENST00000489994 UBA5Q9GZZ9 404 aa6.9□□□□□ -1.31
IFRD1-215ENST00000489994 RPS6KL1Q9Y6S9 549 aa6.9□□□□□ -1.31
IFRD1-215ENST00000489994 MROH1Q8NDA8 1641 aa6.9□□□□□ -1.31
IFRD1-215ENST00000489994 ABCC3O15438 1527 aa6.89□□□□□ -1.31
IFRD1-215ENST00000489994 SSFA2P28290 1259 aa6.89□□□□□ -1.31
IFRD1-215ENST00000489994 MTA1Q13330 715 aa6.89□□□□□ -1.31
IFRD1-215ENST00000489994 WDR78Q5VTH9 848 aa6.89□□□□□ -1.31
IFRD1-215ENST00000489994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.89□□□□□ -1.31
IFRD1-215ENST00000489994 CXorf38Q8TB03 319 aa6.89□□□□□ -1.31
IFRD1-215ENST00000489994 CDK15Q96Q40 435 aa6.89□□□□□ -1.31
IFRD1-215ENST00000489994 C1QTNF2Q9BXJ5 285 aa6.89□□□□□ -1.31
IFRD1-215ENST00000489994 NCOA2Q15596 1464 aa6.89□□□□□ -1.31
IFRD1-215ENST00000489994 ANKRD62A6NC57 917 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 GOLGA6CA6NDK9 693 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 GOLGA6BA6NDN3 693 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 KIF20AO95235 890 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 GOLGA6DP0CG33 693 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 MCCD1P59942 119 aaPredicted RBP6.88□□□□□ -1.31
IFRD1-215ENST00000489994 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
IFRD1-215ENST00000489994 ZNF280DQ6N043 979 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 ANKRD23Q86SG2 305 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 TRMT44Q8IYL2 757 aaKnown RBP6.88□□□□□ -1.31
IFRD1-215ENST00000489994 MAP7D2Q96T17 732 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 GOLGA6AQ9NYA3 693 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 ERVK-7P63135 1459 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 CCDC141Q6ZP82 1450 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 SRCAPQ6ZRS2 3230 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 PHLPP1O60346 1717 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 EHBP1L1Q8N3D4 1523 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 FAM135BQ49AJ0 1406 aa6.88□□□□□ -1.31
IFRD1-215ENST00000489994 ARHGEF5Q12774 1597 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 SCAF11Q99590 1463 aaKnown RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 ARHGAP23Q9P227 1491 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 MTUS2Q5JR59 1369 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 AXIN1O15169 862 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 ADH1CP00326 375 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 LIG1P18858 919 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 NR1H3Q13133 447 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 DDX46Q7L014 1031 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms