RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 STIM2Q9P246 746 aa10.02□□□□□ -0.81
CCDC39-206ENST00000489868 KCNH4Q9UQ05 1017 aa10.02□□□□□ -0.81
CCDC39-206ENST00000489868 MAP2K3P46734 347 aa10.01□□□□□ -0.81
CCDC39-206ENST00000489868 SERPINB4P48594 390 aa10.01□□□□□ -0.81
CCDC39-206ENST00000489868 ANO2Q9NQ90 1003 aa10.01□□□□□ -0.81
CCDC39-206ENST00000489868 ARSDP51689 593 aa10□□□□□ -0.81
CCDC39-206ENST00000489868 INSM1Q01101 510 aaPredicted RBP10□□□□□ -0.81
CCDC39-206ENST00000489868 SPEM2Q0P670 501 aa10□□□□□ -0.81
CCDC39-206ENST00000489868 ZNF211Q13398 564 aaPredicted RBP10□□□□□ -0.81
CCDC39-206ENST00000489868 TXNDC2Q86VQ3 553 aa10□□□□□ -0.81
CCDC39-206ENST00000489868 OXCT2Q9BYC2 517 aaPredicted RBP10□□□□□ -0.81
CCDC39-206ENST00000489868 NSFL1CQ9UNZ2 370 aaKnown RBP10□□□□□ -0.81
CCDC39-206ENST00000489868 CELA2BP08218 269 aaPredicted RBP9.99□□□□□ -0.81
CCDC39-206ENST00000489868 PCBP4P57723 403 aaKnown RBP9.99□□□□□ -0.81
CCDC39-206ENST00000489868 ZNF468Q5VIY5 522 aaPredicted RBP9.99□□□□□ -0.81
CCDC39-206ENST00000489868 ATCAYQ86WG3 371 aa9.99□□□□□ -0.81
CCDC39-206ENST00000489868 GGA1Q9UJY5 639 aa9.99□□□□□ -0.81
CCDC39-206ENST00000489868 ARAFP10398 606 aa9.98□□□□□ -0.81
CCDC39-206ENST00000489868 MPSTP25325 297 aa9.98□□□□□ -0.81
CCDC39-206ENST00000489868 PDE4CQ08493 712 aa9.98□□□□□ -0.81
CCDC39-206ENST00000489868 B4GALNT3Q6L9W6 998 aa9.98□□□□□ -0.81
CCDC39-206ENST00000489868 RGL4Q8IZJ4 473 aa9.98□□□□□ -0.81
CCDC39-206ENST00000489868 GSX2Q9BZM3 304 aa9.98□□□□□ -0.81
CCDC39-206ENST00000489868 RTCBQ9Y3I0 505 aaKnown RBP9.98□□□□□ -0.81
CCDC39-206ENST00000489868 ARHGEF15O94989 841 aa9.97□□□□□ -0.81
CCDC39-206ENST00000489868 ABL1P00519 1130 aa9.97□□□□□ -0.81
CCDC39-206ENST00000489868 ZAP70P43403 619 aa9.97□□□□□ -0.81
CCDC39-206ENST00000489868 FCHSD1Q86WN1 690 aa9.97□□□□□ -0.81
CCDC39-206ENST00000489868 KCNMB2Q9Y691 235 aa9.97□□□□□ -0.81
CCDC39-206ENST00000489868 NEURL1BA8MQ27 555 aa9.96□□□□□ -0.82
CCDC39-206ENST00000489868 ARID4AP29374 1257 aaPredicted RBP9.96□□□□□ -0.82
CCDC39-206ENST00000489868 TRIP4Q15650 581 aaPredicted RBP9.96□□□□□ -0.82
CCDC39-206ENST00000489868 SYT9Q86SS6 491 aa9.96□□□□□ -0.82
CCDC39-206ENST00000489868 SVOPQ8N4V2 548 aa9.96□□□□□ -0.82
CCDC39-206ENST00000489868 PRR12Q9ULL5 1215 aa9.96□□□□□ -0.82
CCDC39-206ENST00000489868 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
CCDC39-206ENST00000489868 BRD1O95696 1058 aa9.95□□□□□ -0.82
CCDC39-206ENST00000489868 BCRP11274 1271 aa9.95□□□□□ -0.82
CCDC39-206ENST00000489868 NPR3P17342 541 aa9.95□□□□□ -0.82
CCDC39-206ENST00000489868 ECM1Q16610 540 aa9.95□□□□□ -0.82
CCDC39-206ENST00000489868 SLCO4C1Q6ZQN7 724 aa9.95□□□□□ -0.82
CCDC39-206ENST00000489868 TRAIPQ9BWF2 469 aa9.95□□□□□ -0.82
CCDC39-206ENST00000489868 OIP5O43482 229 aa9.94□□□□□ -0.82
CCDC39-206ENST00000489868 EIF1AXP47813 144 aaKnown RBP9.94□□□□□ -0.82
CCDC39-206ENST00000489868 GOLGA6L1Q8N7Z2 621 aa9.94□□□□□ -0.82
CCDC39-206ENST00000489868 ABTB2Q8N961 1025 aa9.94□□□□□ -0.82
CCDC39-206ENST00000489868 BHMTQ93088 406 aa9.94□□□□□ -0.82
CCDC39-206ENST00000489868 MDFIQ99750 246 aa9.94□□□□□ -0.82
CCDC39-206ENST00000489868 AVENQ9NQS1 362 aaPredicted RBP9.94□□□□□ -0.82
CCDC39-206ENST00000489868 ZFATQ9P243 1243 aa9.94□□□□□ -0.82
CCDC39-206ENST00000489868 EPB42P16452 691 aa9.93□□□□□ -0.82
CCDC39-206ENST00000489868 ADH6P28332 368 aa9.93□□□□□ -0.82
CCDC39-206ENST00000489868 CCINQ13939 588 aa9.93□□□□□ -0.82
CCDC39-206ENST00000489868 CMTR1Q8N1G2 835 aaKnown RBP9.93□□□□□ -0.82
CCDC39-206ENST00000489868 GPR152Q8TDT2 470 aa9.93□□□□□ -0.82
CCDC39-206ENST00000489868 GDF2Q9UK05 429 aaPredicted RBP9.93□□□□□ -0.82
CCDC39-206ENST00000489868 MTMR7Q9Y216 660 aa9.93□□□□□ -0.82
CCDC39-206ENST00000489868 ICMTO60725 284 aa9.92□□□□□ -0.82
CCDC39-206ENST00000489868 EPXP11678 715 aa9.92□□□□□ -0.82
CCDC39-206ENST00000489868 FKBP4Q02790 459 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC39-206ENST00000489868 KRT25Q7Z3Z0 450 aa9.92□□□□□ -0.82
CCDC39-206ENST00000489868 GALNT6Q8NCL4 622 aa9.92□□□□□ -0.82
CCDC39-206ENST00000489868 EGFL7Q9UHF1 273 aa9.92□□□□□ -0.82
CCDC39-206ENST00000489868 H3BRB1 525 aa9.91□□□□□ -0.82
CCDC39-206ENST00000489868 SIN3BO75182 1162 aa9.91□□□□□ -0.82
CCDC39-206ENST00000489868 XYLBO75191 536 aa9.91□□□□□ -0.82
CCDC39-206ENST00000489868 SASH3O75995 380 aa9.91□□□□□ -0.82
CCDC39-206ENST00000489868 EGFRP00533 1210 aa9.91□□□□□ -0.82
CCDC39-206ENST00000489868 NFKB1P19838 968 aa9.91□□□□□ -0.82
CCDC39-206ENST00000489868 TARSP26639 723 aaKnown RBP9.91□□□□□ -0.82
CCDC39-206ENST00000489868 SF3B2Q13435 895 aaKnown RBP9.91□□□□□ -0.82
CCDC39-206ENST00000489868 NOM1Q5C9Z4 860 aaKnown RBP9.91□□□□□ -0.82
CCDC39-206ENST00000489868 EDARADDQ8WWZ3 215 aa9.91□□□□□ -0.82
CCDC39-206ENST00000489868 TUT1Q9H6E5 874 aaKnown RBP9.91□□□□□ -0.82
CCDC39-206ENST00000489868 LRRC4BQ9NT99 713 aa9.9□□□□□ -0.82
CCDC39-206ENST00000489868 GNEQ9Y223 722 aaKnown RBP9.9□□□□□ -0.82
CCDC39-206ENST00000489868 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.9□□□□□ -0.82
CCDC39-206ENST00000489868 HOXB4P17483 251 aaPredicted RBP9.89□□□□□ -0.83
CCDC39-206ENST00000489868 EDEM1Q92611 657 aa9.89□□□□□ -0.83
CCDC39-206ENST00000489868 TNFRSF25Q93038 417 aa9.89□□□□□ -0.83
CCDC39-206ENST00000489868 NUDT16Q96DE0 195 aaKnown RBP9.89□□□□□ -0.83
CCDC39-206ENST00000489868 FZD6O60353 706 aa9.88□□□□□ -0.83
CCDC39-206ENST00000489868 FAM13AO94988 1023 aa9.88□□□□□ -0.83
CCDC39-206ENST00000489868 ARHGAP4P98171 946 aa9.88□□□□□ -0.83
CCDC39-206ENST00000489868 MAP3K10Q02779 954 aa9.88□□□□□ -0.83
CCDC39-206ENST00000489868 DNM1Q05193 864 aaKnown RBP9.88□□□□□ -0.83
CCDC39-206ENST00000489868 PIK3R5Q8WYR1 880 aa9.88□□□□□ -0.83
CCDC39-206ENST00000489868 C11orf16Q9NQ32 467 aa9.88□□□□□ -0.83
CCDC39-206ENST00000489868 STK17AQ9UEE5 414 aa9.88□□□□□ -0.83
CCDC39-206ENST00000489868 ADAMTS8Q9UP79 889 aa9.88□□□□□ -0.83
CCDC39-206ENST00000489868 ADARB2-AS1A8MUL3 147 aa9.87□□□□□ -0.83
CCDC39-206ENST00000489868 PDGFAP04085 211 aa9.87□□□□□ -0.83
CCDC39-206ENST00000489868 CCER1Q8TC90 406 aaPredicted RBP9.87□□□□□ -0.83
CCDC39-206ENST00000489868 PNMA5Q96PV4 448 aa9.87□□□□□ -0.83
CCDC39-206ENST00000489868 CCDC87Q9NVE4 849 aa9.87□□□□□ -0.83
CCDC39-206ENST00000489868 A6NHS1 94 aa9.86□□□□□ -0.83
CCDC39-206ENST00000489868 UBAP1LF5GYI3 381 aa9.86□□□□□ -0.83
CCDC39-206ENST00000489868 GLYCTKQ8IVS8 523 aa9.86□□□□□ -0.83
CCDC39-206ENST00000489868 GGNBP2Q9H3C7 697 aa9.86□□□□□ -0.83
CCDC39-206ENST00000489868 POLIQ9UNA4 740 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms