RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 PSMD1Q99460 953 aa10.15□□□□□ -0.78
COL9A1-209ENST00000489861 POLKQ9UBT6 870 aa10.15□□□□□ -0.78
COL9A1-209ENST00000489861 NPHP1O15259 732 aa10.14□□□□□ -0.79
COL9A1-209ENST00000489861 AMOTQ4VCS5 1084 aa10.14□□□□□ -0.79
COL9A1-209ENST00000489861 C1orf141Q5JVX7 400 aa10.14□□□□□ -0.79
COL9A1-209ENST00000489861 SLC51AQ86UW1 340 aa10.14□□□□□ -0.79
COL9A1-209ENST00000489861 SIN3AQ96ST3 1273 aa10.14□□□□□ -0.79
COL9A1-209ENST00000489861 A0A087WZG4 1122 aa10.13□□□□□ -0.79
COL9A1-209ENST00000489861 CAMTA2O94983 1202 aa10.13□□□□□ -0.79
COL9A1-209ENST00000489861 FBXO46Q6PJ61 603 aaPredicted RBP10.13□□□□□ -0.79
COL9A1-209ENST00000489861 USP48Q86UV5 1035 aa10.13□□□□□ -0.79
COL9A1-209ENST00000489861 ZNF296Q8WUU4 475 aaPredicted RBP10.13□□□□□ -0.79
COL9A1-209ENST00000489861 CARD14Q9BXL6 1004 aa10.13□□□□□ -0.79
COL9A1-209ENST00000489861 SLC52A2Q9HAB3 445 aa10.13□□□□□ -0.79
COL9A1-209ENST00000489861 LGR6Q9HBX8 967 aa10.13□□□□□ -0.79
COL9A1-209ENST00000489861 HDAC9Q9UKV0 1011 aa10.13□□□□□ -0.79
COL9A1-209ENST00000489861 ZNF157P51786 506 aaPredicted RBP10.12□□□□□ -0.79
COL9A1-209ENST00000489861 CDC37L1Q7L3B6 337 aa10.12□□□□□ -0.79
COL9A1-209ENST00000489861 AEBP1Q8IUX7 1158 aa10.12□□□□□ -0.79
COL9A1-209ENST00000489861 LARGE2Q8N3Y3 721 aa10.12□□□□□ -0.79
COL9A1-209ENST00000489861 TRPM4Q8TD43 1214 aa10.12□□□□□ -0.79
COL9A1-209ENST00000489861 CCDC102AQ96A19 550 aa10.12□□□□□ -0.79
COL9A1-209ENST00000489861 ZNF330Q9Y3S2 320 aaPredicted RBP10.12□□□□□ -0.79
COL9A1-209ENST00000489861 MRC1P22897 1456 aa10.11□□□□□ -0.79
COL9A1-209ENST00000489861 PITPNM2Q9BZ72 1349 aa10.11□□□□□ -0.79
COL9A1-209ENST00000489861 SHTN1A0MZ66 631 aa10.11□□□□□ -0.79
COL9A1-209ENST00000489861 TBC1D8O95759 1140 aa10.11□□□□□ -0.79
COL9A1-209ENST00000489861 SLC10A3P09131 477 aa10.11□□□□□ -0.79
COL9A1-209ENST00000489861 VSIG10Q8N0Z9 540 aa10.11□□□□□ -0.79
COL9A1-209ENST00000489861 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
COL9A1-209ENST00000489861 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
COL9A1-209ENST00000489861 GMPSP49915 693 aaPredicted RBP10.1□□□□□ -0.79
COL9A1-209ENST00000489861 CXCL9Q07325 125 aa10.1□□□□□ -0.79
COL9A1-209ENST00000489861 GBA2Q9HCG7 927 aaPredicted RBP10.1□□□□□ -0.79
COL9A1-209ENST00000489861 UNC80Q8N2C7 3258 aa10.1□□□□□ -0.79
COL9A1-209ENST00000489861 LAMA3Q16787 3333 aa10.09□□□□□ -0.79
COL9A1-209ENST00000489861 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
COL9A1-209ENST00000489861 NPC1L1Q9UHC9 1359 aa10.09□□□□□ -0.79
COL9A1-209ENST00000489861 STARD3NLO95772 234 aa10.08□□□□□ -0.8
COL9A1-209ENST00000489861 EN2P19622 333 aaPredicted RBP10.08□□□□□ -0.8
COL9A1-209ENST00000489861 ALDH1B1P30837 517 aa10.08□□□□□ -0.8
COL9A1-209ENST00000489861 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
COL9A1-209ENST00000489861 NEUROD1Q13562 356 aa10.08□□□□□ -0.8
COL9A1-209ENST00000489861 NIM1KQ8IY84 436 aa10.08□□□□□ -0.8
COL9A1-209ENST00000489861 H0YGN5 161 aa10.07□□□□□ -0.8
COL9A1-209ENST00000489861 GPR25O00155 361 aa10.07□□□□□ -0.8
COL9A1-209ENST00000489861 RNMTO43148 476 aaKnown RBP10.07□□□□□ -0.8
COL9A1-209ENST00000489861 A1BGP04217 495 aa10.07□□□□□ -0.8
COL9A1-209ENST00000489861 IL6STP40189 918 aaPredicted RBP10.07□□□□□ -0.8
COL9A1-209ENST00000489861 C2orf69Q8N8R5 385 aa10.07□□□□□ -0.8
COL9A1-209ENST00000489861 ADM5C9JUS6 153 aa10.06□□□□□ -0.8
COL9A1-209ENST00000489861 TNNT2P45379 298 aaPredicted RBP10.06□□□□□ -0.8
COL9A1-209ENST00000489861 AOC3Q16853 763 aa10.06□□□□□ -0.8
COL9A1-209ENST00000489861 CC2D2BQ6DHV5 1058 aa10.06□□□□□ -0.8
COL9A1-209ENST00000489861 RASAL3Q86YV0 1011 aa10.06□□□□□ -0.8
COL9A1-209ENST00000489861 R3HDMLQ9H3Y0 253 aa10.06□□□□□ -0.8
COL9A1-209ENST00000489861 FAM177BA6PVY3 158 aa10.05□□□□□ -0.8
COL9A1-209ENST00000489861 PPIP5K2O43314 1243 aa10.05□□□□□ -0.8
COL9A1-209ENST00000489861 EGFRP00533 1210 aa10.05□□□□□ -0.8
COL9A1-209ENST00000489861 CRY2Q49AN0 593 aa10.05□□□□□ -0.8
COL9A1-209ENST00000489861 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
COL9A1-209ENST00000489861 KRT26Q7Z3Y9 468 aa10.05□□□□□ -0.8
COL9A1-209ENST00000489861 DZIP3Q86Y13 1208 aaKnown RBP10.05□□□□□ -0.8
COL9A1-209ENST00000489861 ZNF496Q96IT1 587 aaPredicted RBP10.05□□□□□ -0.8
COL9A1-209ENST00000489861 RBM27Q9P2N5 1060 aaKnown RBP10.05□□□□□ -0.8
COL9A1-209ENST00000489861 CNOT7Q9UIV1 285 aaKnown RBP10.05□□□□□ -0.8
COL9A1-209ENST00000489861 ZNRF3Q9ULT6 936 aa10.05□□□□□ -0.8
COL9A1-209ENST00000489861 VCANP13611 3396 aa10.04□□□□□ -0.8
COL9A1-209ENST00000489861 TCERG1O14776 1098 aaKnown RBP10.04□□□□□ -0.8
COL9A1-209ENST00000489861 SLC24A1O60721 1099 aa10.04□□□□□ -0.8
COL9A1-209ENST00000489861 PIP4K2AP48426 406 aaPredicted RBP10.04□□□□□ -0.8
COL9A1-209ENST00000489861 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
COL9A1-209ENST00000489861 SULT6B1Q6IMI4 303 aa10.04□□□□□ -0.8
COL9A1-209ENST00000489861 TPTE2Q6XPS3 522 aa10.04□□□□□ -0.8
COL9A1-209ENST00000489861 REM2Q8IYK8 340 aaPredicted RBP10.04□□□□□ -0.8
COL9A1-209ENST00000489861 BCL2L13Q9BXK5 485 aa10.04□□□□□ -0.8
COL9A1-209ENST00000489861 CDHR2Q9BYE9 1310 aa10.04□□□□□ -0.8
COL9A1-209ENST00000489861 ABCC12Q96J65 1359 aa10.03□□□□□ -0.8
COL9A1-209ENST00000489861 HEG1Q9ULI3 1381 aa10.03□□□□□ -0.8
COL9A1-209ENST00000489861 RAD17O75943 681 aa10.03□□□□□ -0.8
COL9A1-209ENST00000489861 INTS3Q68E01 1043 aaKnown RBP10.03□□□□□ -0.8
COL9A1-209ENST00000489861 CLEC4GQ6UXB4 293 aa10.03□□□□□ -0.8
COL9A1-209ENST00000489861 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
COL9A1-209ENST00000489861 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
COL9A1-209ENST00000489861 COL25A1Q9BXS0 654 aaPredicted RBP10.03□□□□□ -0.8
COL9A1-209ENST00000489861 TTC28Q96AY4 2481 aa10.02□□□□□ -0.8
COL9A1-209ENST00000489861 SIPA1L3O60292 1781 aaPredicted RBP10.02□□□□□ -0.81
COL9A1-209ENST00000489861 FKTNO75072 461 aa10.02□□□□□ -0.81
COL9A1-209ENST00000489861 NIP7Q9Y221 180 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL9A1-209ENST00000489861 YDJCA8MPS7 323 aa10.01□□□□□ -0.81
COL9A1-209ENST00000489861 H7C1D1 291 aa10.01□□□□□ -0.81
COL9A1-209ENST00000489861 HOXA10P31260 410 aaPredicted RBP10.01□□□□□ -0.81
COL9A1-209ENST00000489861 TBC1D10BQ4KMP7 808 aaPredicted RBP10.01□□□□□ -0.81
COL9A1-209ENST00000489861 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
COL9A1-209ENST00000489861 OTOP1Q7RTM1 612 aa10.01□□□□□ -0.81
COL9A1-209ENST00000489861 ZBTB12Q9Y330 459 aaPredicted RBP10.01□□□□□ -0.81
COL9A1-209ENST00000489861 TM4SF4P48230 202 aa10□□□□□ -0.81
COL9A1-209ENST00000489861 NUTM1Q86Y26 1132 aa10□□□□□ -0.81
COL9A1-209ENST00000489861 TTC5Q8N0Z6 440 aa10□□□□□ -0.81
COL9A1-209ENST00000489861 TEX13AQ9BXU3 409 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms