RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NUTM1Q86Y26 1132 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 EGFL6Q8IUX8 553 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 IQUBQ8NA54 791 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 CCDC191Q8NCU4 936 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 FBXO18Q8NFZ0 1043 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 GOLGA5Q8TBA6 731 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 RUNDC1Q96C34 613 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 INTS4Q96HW7 963 aaKnown RBP5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 EYA1Q99502 592 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 ST7Q9NRC1 585 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 IFT57Q9NWB7 429 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 ZNF215Q9UL58 517 aaPredicted RBP5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 FHOD1Q9Y613 1164 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 ASXL1Q8IXJ9 1541 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 PTPRCP08575 1304 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 CCDC171Q6TFL3 1326 aa5.65□□□□□ -1.51
SNRNP40-206ENST00000489853 TRPM1Q7Z4N2 1603 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 NUTM2BA6NNL0 878 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 NUTM2EB1AL46 878 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 IPO8O15397 1037 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 SLU7O95391 586 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 MCCP23508 829 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 MAGEA9P43362 315 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 PLA2G4AP47712 749 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 GYS2P54840 703 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 NBPF20Q3BBV1 942 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 TTC31Q49AM3 519 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 ANKRD45Q5TZF3 282 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 NUTM2DQ5VT03 806 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 ATF7IPQ6VMQ6 1270 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 SRLQ86TD4 932 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 NUTM2AQ8IVF1 878 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 ITPRIPQ8IWB1 547 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 SUGP1Q8IWZ8 645 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 GPATCH11Q8N954 259 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 SPC24Q8NBT2 197 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 C16orf45Q96MC5 204 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 FUCA2Q9BTY2 467 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 BCL2L13Q9BXK5 485 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 TMX1Q9H3N1 280 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 MED4Q9NPJ6 270 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 PSD3Q9NYI0 1048 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 TSKSQ9UJT2 592 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 LRRFIP2Q9Y608 721 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 PTPRGP23470 1445 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 ANKRD50Q9ULJ7 1429 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 GLI2P10070 1586 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 REREQ9P2R6 1566 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 NUP155O75694 1391 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 PRDM15P57071 1507 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 KIF2AO00139 706 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 SMAPO00193 183 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 AP5Z1O43299 807 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 NEMFO60524 1076 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 GADD45BO75293 160 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 PNMA6AP0CW24 399 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 TRIM27P14373 513 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 PTGS1P23219 599 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 SRPK2P78362 688 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 CUL4AQ13619 759 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 DIXDC1Q155Q3 683 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 NUDT18Q6ZVK8 323 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 CERKQ8TCT0 537 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 PBXIP1Q96AQ6 731 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 CHAMP1Q96JM3 812 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 UBXN6Q9BZV1 441 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 CXorf56Q9H5V9 222 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 LCMT1Q9UIC8 334 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 RRP15Q9Y3B9 282 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 SYNMO15061 1565 aa5.64□□□□□ -1.51
SNRNP40-206ENST00000489853 ADGRL2O95490 1459 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 POLR3AO14802 1390 aaPredicted RBP5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 ATAD2Q6PL18 1390 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 PTPN5P54829 565 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 UBE2HP62256 183 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 CTDSPL2Q05D32 466 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 PTPN14Q15678 1187 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 ELF2Q15723 593 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 INTS3Q68E01 1043 aaKnown RBP5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 ZSCAN25Q6NSZ9 544 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 CCDC186Q7Z3E2 898 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 TCP11L2Q8N4U5 519 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 NEK11Q8NG66 645 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 EPS8L1Q8TE68 723 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 RTF1Q92541 710 aaKnown RBP5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 DRC1Q96MC2 740 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 CEP89Q96ST8 783 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 RAI14Q9P0K7 980 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 CCDC141Q6ZP82 1450 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 PLEKHG2Q9H7P9 1386 aa5.63□□□□□ -1.51
SNRNP40-206ENST00000489853 CFAP74Q9C0B2 1584 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 CCDC196A0A1B0GTZ2 297 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 TUBB4AP04350 444 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 IVLP07476 585 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 TRDNQ13061 729 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 CASC1Q6TDU7 716 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 EP400NLQ6ZTU2 488 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms