RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 GCKRQ14397 625 aa13.8□□□□□ -0.2
TFF3-203ENST00000489676 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
TFF3-203ENST00000489676 PARP10Q53GL7 1025 aa13.8□□□□□ -0.2
TFF3-203ENST00000489676 MSL1Q68DK7 614 aa13.8□□□□□ -0.2
TFF3-203ENST00000489676 NLGN1Q8N2Q7 840 aa13.8□□□□□ -0.2
TFF3-203ENST00000489676 NIP7Q9Y221 180 aaKnown RBP eCLIP13.8□□□□□ -0.2
TFF3-203ENST00000489676 UTYO14607 1347 aa13.8□□□□□ -0.2
TFF3-203ENST00000489676 TNRC6CQ9HCJ0 1690 aaKnown RBP13.79□□□□□ -0.2
TFF3-203ENST00000489676 POLRMTO00411 1230 aaKnown RBP13.79□□□□□ -0.2
TFF3-203ENST00000489676 CASP7P55210 303 aa13.79□□□□□ -0.2
TFF3-203ENST00000489676 SUSD4Q5VX71 490 aa13.79□□□□□ -0.2
TFF3-203ENST00000489676 CWC25Q9NXE8 425 aaPredicted RBP13.79□□□□□ -0.2
TFF3-203ENST00000489676 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
TFF3-203ENST00000489676 RIC1Q4ADV7 1423 aa13.79□□□□□ -0.2
TFF3-203ENST00000489676 ANKRD31Q8N7Z5 1873 aa13.78□□□□□ -0.2
TFF3-203ENST00000489676 USP44Q9H0E7 712 aa13.78□□□□□ -0.2
TFF3-203ENST00000489676 ABCC12Q96J65 1359 aa13.78□□□□□ -0.2
TFF3-203ENST00000489676 GRM8O00222 908 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 PCCAP05165 728 aaPredicted RBP13.77□□□□□ -0.21
TFF3-203ENST00000489676 MMP10P09238 476 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 YY1P25490 414 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 ITPRIPQ8IWB1 547 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 SETDB2Q96T68 719 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 MEIS3Q99687 375 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 MTFR1LQ9H019 292 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 KIF13BQ9NQT8 1826 aa13.77□□□□□ -0.21
TFF3-203ENST00000489676 MYH3P11055 1940 aa13.76□□□□□ -0.21
TFF3-203ENST00000489676 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
TFF3-203ENST00000489676 CDHR2Q9BYE9 1310 aa13.76□□□□□ -0.21
TFF3-203ENST00000489676 H7C1W4 665 aa13.76□□□□□ -0.21
TFF3-203ENST00000489676 ZBTB7BO15156 539 aaPredicted RBP13.76□□□□□ -0.21
TFF3-203ENST00000489676 ZBTB7AO95365 584 aa13.76□□□□□ -0.21
TFF3-203ENST00000489676 ZBTB38Q8NAP3 1195 aaPredicted RBP13.76□□□□□ -0.21
TFF3-203ENST00000489676 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
TFF3-203ENST00000489676 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
TFF3-203ENST00000489676 NBPF7P0C2Y1 421 aaPredicted RBP13.75□□□□□ -0.21
TFF3-203ENST00000489676 UBE3BQ7Z3V4 1068 aa13.75□□□□□ -0.21
TFF3-203ENST00000489676 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
TFF3-203ENST00000489676 SYNE4Q8N205 404 aa13.75□□□□□ -0.21
TFF3-203ENST00000489676 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
TFF3-203ENST00000489676 COL11A2P13942 1736 aaPredicted RBP13.75□□□□□ -0.21
TFF3-203ENST00000489676 KIAA1551Q9HCM1 1747 aa13.75□□□□□ -0.21
TFF3-203ENST00000489676 SH3TC1Q8TE82 1336 aa13.74□□□□□ -0.21
TFF3-203ENST00000489676 SERPINB2P05120 415 aa13.74□□□□□ -0.21
TFF3-203ENST00000489676 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
TFF3-203ENST00000489676 PRR5LQ6MZQ0 368 aa13.74□□□□□ -0.21
TFF3-203ENST00000489676 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
TFF3-203ENST00000489676 FAM89AQ96GI7 184 aa13.74□□□□□ -0.21
TFF3-203ENST00000489676 KAZALD1Q96I82 304 aa13.74□□□□□ -0.21
TFF3-203ENST00000489676 NYXQ9GZU5 481 aa13.74□□□□□ -0.21
TFF3-203ENST00000489676 ZBTB40Q9NUA8 1239 aa13.74□□□□□ -0.21
TFF3-203ENST00000489676 TRMT112Q9UI30 125 aaKnown RBP13.74□□□□□ -0.21
TFF3-203ENST00000489676 FAM177BA6PVY3 158 aa13.73□□□□□ -0.21
TFF3-203ENST00000489676 PTGER2P43116 358 aa13.73□□□□□ -0.21
TFF3-203ENST00000489676 ERFEQ4G0M1 354 aa13.73□□□□□ -0.21
TFF3-203ENST00000489676 NUTM1Q86Y26 1132 aa13.73□□□□□ -0.21
TFF3-203ENST00000489676 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
TFF3-203ENST00000489676 EXOC6Q8TAG9 804 aa13.73□□□□□ -0.21
TFF3-203ENST00000489676 JARID2Q92833 1246 aaPredicted RBP13.73□□□□□ -0.21
TFF3-203ENST00000489676 SUCLG2Q96I99 432 aa13.73□□□□□ -0.21
TFF3-203ENST00000489676 PLA2G12BQ9BX93 195 aa13.73□□□□□ -0.21
TFF3-203ENST00000489676 C9orf78Q9NZ63 289 aaPredicted RBP13.73□□□□□ -0.21
TFF3-203ENST00000489676 GNAI3P08754 354 aa13.72□□□□□ -0.21
TFF3-203ENST00000489676 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
TFF3-203ENST00000489676 SLC10A5Q5PT55 438 aa13.72□□□□□ -0.21
TFF3-203ENST00000489676 ATF5Q9Y2D1 282 aaPredicted RBP13.72□□□□□ -0.21
TFF3-203ENST00000489676 DLEC1Q9Y238 1755 aa13.72□□□□□ -0.21
TFF3-203ENST00000489676 COL4A1P02462 1669 aa13.72□□□□□ -0.21
TFF3-203ENST00000489676 IRS4O14654 1257 aaPredicted RBP13.71□□□□□ -0.21
TFF3-203ENST00000489676 RTL5Q5HYW3 569 aaPredicted RBP13.71□□□□□ -0.21
TFF3-203ENST00000489676 EPHA10Q5JZY3 1008 aa13.71□□□□□ -0.21
TFF3-203ENST00000489676 TPTE2Q6XPS3 522 aa13.71□□□□□ -0.21
TFF3-203ENST00000489676 LRRFIP2Q9Y608 721 aaKnown RBP13.71□□□□□ -0.21
TFF3-203ENST00000489676 PARP3Q9Y6F1 533 aa13.71□□□□□ -0.21
TFF3-203ENST00000489676 GOLGB1Q14789 3259 aaKnown RBP13.7□□□□□ -0.22
TFF3-203ENST00000489676 FOXO4P98177 505 aa13.7□□□□□ -0.22
TFF3-203ENST00000489676 RABL6Q3YEC7 729 aaPredicted RBP13.7□□□□□ -0.22
TFF3-203ENST00000489676 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
TFF3-203ENST00000489676 CCDC24Q8N4L8 307 aa13.7□□□□□ -0.22
TFF3-203ENST00000489676 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
TFF3-203ENST00000489676 KLRG2A4D1S0 409 aaPredicted RBP13.69□□□□□ -0.22
TFF3-203ENST00000489676 GNAI2P04899 355 aa13.69□□□□□ -0.22
TFF3-203ENST00000489676 HCLS1P14317 486 aaPredicted RBP13.69□□□□□ -0.22
TFF3-203ENST00000489676 CTSWP56202 376 aa13.69□□□□□ -0.22
TFF3-203ENST00000489676 ST5P78524 1137 aa13.69□□□□□ -0.22
TFF3-203ENST00000489676 MTX1Q13505 466 aa13.69□□□□□ -0.22
TFF3-203ENST00000489676 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
TFF3-203ENST00000489676 BICC1Q9H694 974 aaKnown RBP13.69□□□□□ -0.22
TFF3-203ENST00000489676 C1orf115Q9H7X2 142 aa13.69□□□□□ -0.22
TFF3-203ENST00000489676 RTL9Q8NET4 1388 aa13.69□□□□□ -0.22
TFF3-203ENST00000489676 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
TFF3-203ENST00000489676 PDE8AO60658 829 aa13.68□□□□□ -0.22
TFF3-203ENST00000489676 POLD1P28340 1107 aa13.68□□□□□ -0.22
TFF3-203ENST00000489676 AAMPQ13685 434 aa13.68□□□□□ -0.22
TFF3-203ENST00000489676 CRY2Q49AN0 593 aa13.68□□□□□ -0.22
TFF3-203ENST00000489676 SPON1Q9HCB6 807 aa13.68□□□□□ -0.22
TFF3-203ENST00000489676 CSF1RP07333 972 aa13.67□□□□□ -0.22
TFF3-203ENST00000489676 SF3B3Q15393 1217 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms