RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 HMMRO75330 724 aa17.7■□□□□ 0.42
VPS26A-205ENST00000489656 CASP7P55210 303 aa17.7■□□□□ 0.42
VPS26A-205ENST00000489656 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
VPS26A-205ENST00000489656 MTX1Q13505 466 aa17.7■□□□□ 0.42
VPS26A-205ENST00000489656 HLFQ16534 295 aa17.7■□□□□ 0.42
VPS26A-205ENST00000489656 GCC1Q96CN9 775 aa17.7■□□□□ 0.42
VPS26A-205ENST00000489656 TBC1D2BQ9UPU7 963 aa17.7■□□□□ 0.42
VPS26A-205ENST00000489656 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
VPS26A-205ENST00000489656 H7C1W4 665 aa17.69■□□□□ 0.42
VPS26A-205ENST00000489656 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
VPS26A-205ENST00000489656 APBA3O96018 575 aa17.68■□□□□ 0.42
VPS26A-205ENST00000489656 CLEC4GQ6UXB4 293 aa17.68■□□□□ 0.42
VPS26A-205ENST00000489656 ZNF34Q8IZ26 560 aa17.68■□□□□ 0.42
VPS26A-205ENST00000489656 PROM2Q8N271 834 aa17.68■□□□□ 0.42
VPS26A-205ENST00000489656 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
VPS26A-205ENST00000489656 RTCBQ9Y3I0 505 aaKnown RBP17.68■□□□□ 0.42
VPS26A-205ENST00000489656 GNPATO15228 680 aa17.67■□□□□ 0.42
VPS26A-205ENST00000489656 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
VPS26A-205ENST00000489656 SSH3Q8TE77 659 aa17.67■□□□□ 0.42
VPS26A-205ENST00000489656 KAZALD1Q96I82 304 aa17.67■□□□□ 0.42
VPS26A-205ENST00000489656 SUCLG2Q96I99 432 aa17.67■□□□□ 0.42
VPS26A-205ENST00000489656 ARXQ96QS3 562 aa17.67■□□□□ 0.42
VPS26A-205ENST00000489656 NARFQ9UHQ1 456 aa17.67■□□□□ 0.42
VPS26A-205ENST00000489656 ZNF652Q9Y2D9 606 aa17.67■□□□□ 0.42
VPS26A-205ENST00000489656 POLA2Q14181 598 aa17.66■□□□□ 0.42
VPS26A-205ENST00000489656 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
VPS26A-205ENST00000489656 AK7Q96M32 723 aa17.66■□□□□ 0.42
VPS26A-205ENST00000489656 PNMA6EA0A0J9YXQ4 647 aa17.65■□□□□ 0.42
VPS26A-205ENST00000489656 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
VPS26A-205ENST00000489656 RABL6Q3YEC7 729 aaPredicted RBP17.65■□□□□ 0.42
VPS26A-205ENST00000489656 UBE3BQ7Z3V4 1068 aa17.65■□□□□ 0.42
VPS26A-205ENST00000489656 CDHR2Q9BYE9 1310 aa17.65■□□□□ 0.42
VPS26A-205ENST00000489656 PARP10Q53GL7 1025 aa17.64■□□□□ 0.41
VPS26A-205ENST00000489656 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
VPS26A-205ENST00000489656 PLA2G12BQ9BX93 195 aa17.64■□□□□ 0.41
VPS26A-205ENST00000489656 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
VPS26A-205ENST00000489656 PDZRN3Q9UPQ7 1066 aa17.64■□□□□ 0.41
VPS26A-205ENST00000489656 UBN2Q6ZU65 1347 aa17.64■□□□□ 0.41
VPS26A-205ENST00000489656 SSFA2P28290 1259 aa17.63■□□□□ 0.41
VPS26A-205ENST00000489656 NUCB1Q02818 461 aa17.63■□□□□ 0.41
VPS26A-205ENST00000489656 ZBTB38Q8NAP3 1195 aaPredicted RBP17.63■□□□□ 0.41
VPS26A-205ENST00000489656 SRGAP3O43295 1099 aa17.62■□□□□ 0.41
VPS26A-205ENST00000489656 GPTP24298 496 aa17.62■□□□□ 0.41
VPS26A-205ENST00000489656 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
VPS26A-205ENST00000489656 AMIGO3Q86WK7 504 aa17.62■□□□□ 0.41
VPS26A-205ENST00000489656 ARHGEF1Q92888 912 aaKnown RBP17.62■□□□□ 0.41
VPS26A-205ENST00000489656 USP42Q9H9J4 1324 aaKnown RBP17.62■□□□□ 0.41
VPS26A-205ENST00000489656 ZPR1O75312 459 aa17.61■□□□□ 0.41
VPS26A-205ENST00000489656 FOXO4P98177 505 aa17.61■□□□□ 0.41
VPS26A-205ENST00000489656 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
VPS26A-205ENST00000489656 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
VPS26A-205ENST00000489656 AKT1S1Q96B36 256 aa17.6■□□□□ 0.41
VPS26A-205ENST00000489656 NOP58Q9Y2X3 529 aaKnown RBP17.6■□□□□ 0.41
VPS26A-205ENST00000489656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.59■□□□□ 0.41
VPS26A-205ENST00000489656 RFC4P35249 363 aa17.59■□□□□ 0.41
VPS26A-205ENST00000489656 USPL1Q5W0Q7 1092 aa17.59■□□□□ 0.41
VPS26A-205ENST00000489656 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
VPS26A-205ENST00000489656 CAMKK2Q96RR4 588 aa17.59■□□□□ 0.41
VPS26A-205ENST00000489656 NIP7Q9Y221 180 aaKnown RBP eCLIP17.59■□□□□ 0.41
VPS26A-205ENST00000489656 JARID2Q92833 1246 aaPredicted RBP17.58■□□□□ 0.4
VPS26A-205ENST00000489656 FAM89AQ96GI7 184 aa17.58■□□□□ 0.4
VPS26A-205ENST00000489656 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.4
VPS26A-205ENST00000489656 SRP68Q9UHB9 627 aaKnown RBP17.58■□□□□ 0.4
VPS26A-205ENST00000489656 TRMT112Q9UI30 125 aaKnown RBP17.58■□□□□ 0.4
VPS26A-205ENST00000489656 RAB11FIP3O75154 756 aa17.57■□□□□ 0.4
VPS26A-205ENST00000489656 NTSR2O95665 410 aa17.57■□□□□ 0.4
VPS26A-205ENST00000489656 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
VPS26A-205ENST00000489656 ANKRD45Q5TZF3 282 aa17.57■□□□□ 0.4
VPS26A-205ENST00000489656 SUSD4Q5VX71 490 aa17.57■□□□□ 0.4
VPS26A-205ENST00000489656 SMIM5Q71RC9 77 aa17.57■□□□□ 0.4
VPS26A-205ENST00000489656 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
VPS26A-205ENST00000489656 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
VPS26A-205ENST00000489656 SH3TC1Q8TE82 1336 aa17.56■□□□□ 0.4
VPS26A-205ENST00000489656 CSF1RP07333 972 aa17.56■□□□□ 0.4
VPS26A-205ENST00000489656 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
VPS26A-205ENST00000489656 BAG6P46379 1132 aa17.56■□□□□ 0.4
VPS26A-205ENST00000489656 RFX5P48382 616 aaPredicted RBP17.56■□□□□ 0.4
VPS26A-205ENST00000489656 ZNF827Q17R98 1081 aa17.56■□□□□ 0.4
VPS26A-205ENST00000489656 LMBR1LQ6UX01 489 aa17.56■□□□□ 0.4
VPS26A-205ENST00000489656 FLAD1Q8NFF5 587 aa17.56■□□□□ 0.4
VPS26A-205ENST00000489656 COPRSQ9NQ92 184 aa17.56■□□□□ 0.4
VPS26A-205ENST00000489656 EXOC6BQ9Y2D4 811 aa17.56■□□□□ 0.4
VPS26A-205ENST00000489656 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-205ENST00000489656 PDE8AO60658 829 aa17.55■□□□□ 0.4
VPS26A-205ENST00000489656 PHF14O94880 888 aa17.55■□□□□ 0.4
VPS26A-205ENST00000489656 PDE4AP27815 886 aa17.55■□□□□ 0.4
VPS26A-205ENST00000489656 SF3B2Q13435 895 aaKnown RBP17.55■□□□□ 0.4
VPS26A-205ENST00000489656 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-205ENST00000489656 TBC1D9BQ66K14 1250 aa17.55■□□□□ 0.4
VPS26A-205ENST00000489656 CCDC125Q86Z20 511 aa17.55■□□□□ 0.4
VPS26A-205ENST00000489656 LRP5O75197 1615 aa17.54■□□□□ 0.4
VPS26A-205ENST00000489656 SURF6O75683 361 aaKnown RBP17.54■□□□□ 0.4
VPS26A-205ENST00000489656 EN1Q05925 392 aaPredicted RBP17.54■□□□□ 0.4
VPS26A-205ENST00000489656 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
VPS26A-205ENST00000489656 SKAP1Q86WV1 359 aa17.54■□□□□ 0.4
VPS26A-205ENST00000489656 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
VPS26A-205ENST00000489656 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
VPS26A-205ENST00000489656 AK9Q5TCS8 1911 aa17.54■□□□□ 0.4
VPS26A-205ENST00000489656 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
VPS26A-205ENST00000489656 A0A1B0GUL6 1792 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms