RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 OS9Q13438 667 aaPredicted RBP13.06□□□□□ -0.32
NEB-215ENST00000489048 ANKRD1Q15327 319 aa13.06□□□□□ -0.32
NEB-215ENST00000489048 MAP3K11Q16584 847 aa13.06□□□□□ -0.32
NEB-215ENST00000489048 MPNDQ8N594 471 aa13.06□□□□□ -0.32
NEB-215ENST00000489048 NPHP4O75161 1426 aaPredicted RBP13.06□□□□□ -0.32
NEB-215ENST00000489048 NCAPD2Q15021 1401 aa13.06□□□□□ -0.32
NEB-215ENST00000489048 UTYO14607 1347 aa13.06□□□□□ -0.32
NEB-215ENST00000489048 HEG1Q9ULI3 1381 aa13.06□□□□□ -0.32
NEB-215ENST00000489048 MRVI1Q9Y6F6 885 aa13.06□□□□□ -0.32
NEB-215ENST00000489048 MED23Q9ULK4 1368 aa13.05□□□□□ -0.32
NEB-215ENST00000489048 VPS37CA5D8V6 355 aaPredicted RBP13.05□□□□□ -0.32
NEB-215ENST00000489048 IFIT2P09913 472 aaKnown RBP13.05□□□□□ -0.32
NEB-215ENST00000489048 UTP14CQ5TAP6 766 aaKnown RBP13.05□□□□□ -0.32
NEB-215ENST00000489048 IP6K1Q92551 441 aa13.05□□□□□ -0.32
NEB-215ENST00000489048 NUP62CLQ9H1M0 184 aa13.05□□□□□ -0.32
NEB-215ENST00000489048 SLC27A2O14975 620 aa13.05□□□□□ -0.32
NEB-215ENST00000489048 CTIFO43310 598 aaKnown RBP13.05□□□□□ -0.32
NEB-215ENST00000489048 TYRO3Q06418 890 aa13.05□□□□□ -0.32
NEB-215ENST00000489048 TSGA10IPQ3SY00 556 aa13.05□□□□□ -0.32
NEB-215ENST00000489048 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
NEB-215ENST00000489048 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
NEB-215ENST00000489048 DBF4Q9UBU7 674 aaPredicted RBP13.05□□□□□ -0.32
NEB-215ENST00000489048 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
NEB-215ENST00000489048 CDC37L1Q7L3B6 337 aa13.04□□□□□ -0.32
NEB-215ENST00000489048 SCAND2PQ9GZW5 306 aaPredicted RBP13.04□□□□□ -0.32
NEB-215ENST00000489048 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
NEB-215ENST00000489048 DDX19AQ9NUU7 478 aaKnown RBP13.04□□□□□ -0.32
NEB-215ENST00000489048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.04□□□□□ -0.32
NEB-215ENST00000489048 ANKRD7Q92527 254 aa13.04□□□□□ -0.32
NEB-215ENST00000489048 LIG1P18858 919 aa13.04□□□□□ -0.32
NEB-215ENST00000489048 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
NEB-215ENST00000489048 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
NEB-215ENST00000489048 ILDR2Q71H61 639 aa13.04□□□□□ -0.32
NEB-215ENST00000489048 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
NEB-215ENST00000489048 NECAB1Q8N987 351 aa13.04□□□□□ -0.32
NEB-215ENST00000489048 JARID2Q92833 1246 aaPredicted RBP13.04□□□□□ -0.32
NEB-215ENST00000489048 NPHP3Q7Z494 1330 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 KCNQ3O43525 872 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 GIGYF1O75420 1035 aaPredicted RBP13.03□□□□□ -0.32
NEB-215ENST00000489048 RPS6KB1P23443 525 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
NEB-215ENST00000489048 AACSQ86V21 672 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 USHBP1Q8N6Y0 703 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
NEB-215ENST00000489048 HMG20BQ9P0W2 317 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 BTBD11A6QL63 1104 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 SYCP1Q15431 976 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 RNF20Q5VTR2 975 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 TDRD7Q8NHU6 1098 aaKnown RBP13.03□□□□□ -0.32
NEB-215ENST00000489048 CLSTN2Q9H4D0 955 aa13.03□□□□□ -0.32
NEB-215ENST00000489048 TSC1Q92574 1164 aa13.02□□□□□ -0.32
NEB-215ENST00000489048 FAM227BQ96M60 508 aa13.02□□□□□ -0.32
NEB-215ENST00000489048 C9orf78Q9NZ63 289 aaPredicted RBP13.02□□□□□ -0.32
NEB-215ENST00000489048 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.32
NEB-215ENST00000489048 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.32
NEB-215ENST00000489048 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
NEB-215ENST00000489048 SASH1O94885 1247 aa13.02□□□□□ -0.33
NEB-215ENST00000489048 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
NEB-215ENST00000489048 DMTNQ08495 405 aa13.02□□□□□ -0.33
NEB-215ENST00000489048 TOB2Q14106 344 aaPredicted RBP13.02□□□□□ -0.33
NEB-215ENST00000489048 NBPF6Q5VWK0 638 aa13.02□□□□□ -0.33
NEB-215ENST00000489048 BLOC1S2Q6QNY1 142 aa13.02□□□□□ -0.33
NEB-215ENST00000489048 NBPF4Q96M43 638 aa13.02□□□□□ -0.33
NEB-215ENST00000489048 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 CBX8Q9HC52 389 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 SIPA1L3O60292 1781 aaPredicted RBP13.01□□□□□ -0.33
NEB-215ENST00000489048 CAVIN2O95810 425 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 TEFQ10587 303 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 TPRNQ4KMQ1 711 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 SPC24Q8NBT2 197 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 LINS1Q8NG48 757 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 LEO1Q8WVC0 666 aaPredicted RBP13.01□□□□□ -0.33
NEB-215ENST00000489048 EAF2Q96CJ1 260 aaPredicted RBP13.01□□□□□ -0.33
NEB-215ENST00000489048 KAZALD1Q96I82 304 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 TNMDQ9H2S6 317 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 RFX7Q2KHR2 1363 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
NEB-215ENST00000489048 CAMTA1Q9Y6Y1 1673 aa13□□□□□ -0.33
NEB-215ENST00000489048 A0A0D9SFI3 127 aa13□□□□□ -0.33
NEB-215ENST00000489048 ANXA1P04083 346 aa13□□□□□ -0.33
NEB-215ENST00000489048 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
NEB-215ENST00000489048 CDC25BP30305 580 aa13□□□□□ -0.33
NEB-215ENST00000489048 SPATA32Q96LK8 384 aa13□□□□□ -0.33
NEB-215ENST00000489048 DACT1Q9NYF0 836 aa13□□□□□ -0.33
NEB-215ENST00000489048 GRM8O00222 908 aa13□□□□□ -0.33
NEB-215ENST00000489048 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
NEB-215ENST00000489048 PTGS1P23219 599 aa13□□□□□ -0.33
NEB-215ENST00000489048 KCNJ4P48050 445 aa13□□□□□ -0.33
NEB-215ENST00000489048 ZNF75DP51815 510 aa13□□□□□ -0.33
NEB-215ENST00000489048 AMOTQ4VCS5 1084 aa13□□□□□ -0.33
NEB-215ENST00000489048 LUZP1Q86V48 1076 aa13□□□□□ -0.33
NEB-215ENST00000489048 SUCLG2Q96I99 432 aa13□□□□□ -0.33
NEB-215ENST00000489048 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
NEB-215ENST00000489048 ANO6Q4KMQ2 910 aa12.99□□□□□ -0.33
NEB-215ENST00000489048 PLEKHO1Q53GL0 409 aaPredicted RBP12.99□□□□□ -0.33
NEB-215ENST00000489048 LARP1Q6PKG0 1096 aaKnown RBP12.99□□□□□ -0.33
NEB-215ENST00000489048 ZBTB7CA1YPR0 619 aa12.99□□□□□ -0.33
NEB-215ENST00000489048 COL9A3Q14050 684 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms