RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 USP17L17D6RBQ6 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L19D6RCP7 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L20D6RJB6 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 ATF3P18847 181 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 WDR4P57081 412 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 USP17L24Q0WX57 530 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 LARGE2Q8N3Y3 721 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 ZNF594Q96JF6 807 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 C8orf37Q96NL8 207 aa11.76□□□□□ -0.53
TRAPPC12-221ENST00000489032 IQGAP3Q86VI3 1631 aa11.75□□□□□ -0.53
TRAPPC12-221ENST00000489032 CHD2O14647 1828 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-221ENST00000489032 SCTRP47872 440 aa11.75□□□□□ -0.53
TRAPPC12-221ENST00000489032 CYP2U1Q7Z449 544 aa11.75□□□□□ -0.53
TRAPPC12-221ENST00000489032 NOVA2Q9UNW9 492 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-221ENST00000489032 DIP2AQ14689 1571 aa11.75□□□□□ -0.53
TRAPPC12-221ENST00000489032 ZIC2O95409 532 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-221ENST00000489032 SMPD1P17405 629 aa11.74□□□□□ -0.53
TRAPPC12-221ENST00000489032 CRTC2Q53ET0 693 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-221ENST00000489032 TRIM67Q6ZTA4 783 aa11.74□□□□□ -0.53
TRAPPC12-221ENST00000489032 RETREG2Q8NC44 543 aa11.74□□□□□ -0.53
TRAPPC12-221ENST00000489032 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
TRAPPC12-221ENST00000489032 RPRD2Q5VT52 1461 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-221ENST00000489032 PTK7Q13308 1070 aa11.73□□□□□ -0.53
TRAPPC12-221ENST00000489032 ELOAQ14241 798 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-221ENST00000489032 RAB3GAP2Q9H2M9 1393 aa11.73□□□□□ -0.53
TRAPPC12-221ENST00000489032 C19orf44Q9H6X5 657 aa11.73□□□□□ -0.53
TRAPPC12-221ENST00000489032 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-221ENST00000489032 CLDN10P78369 228 aa11.72□□□□□ -0.53
TRAPPC12-221ENST00000489032 IDI1Q13907 227 aa11.72□□□□□ -0.53
TRAPPC12-221ENST00000489032 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
TRAPPC12-221ENST00000489032 ANKMY2Q8IV38 441 aa11.72□□□□□ -0.53
TRAPPC12-221ENST00000489032 BRINP3Q76B58 766 aa11.71□□□□□ -0.53
TRAPPC12-221ENST00000489032 TPCN2Q8NHX9 752 aa11.71□□□□□ -0.53
TRAPPC12-221ENST00000489032 ITPKCQ96DU7 683 aa11.71□□□□□ -0.53
TRAPPC12-221ENST00000489032 USTQ9Y2C2 406 aa11.71□□□□□ -0.53
TRAPPC12-221ENST00000489032 PCDHGA11Q9Y5H2 935 aa11.71□□□□□ -0.53
TRAPPC12-221ENST00000489032 FAM187AA6NFU0 413 aa11.7□□□□□ -0.54
TRAPPC12-221ENST00000489032 LILRA1O75019 489 aa11.7□□□□□ -0.54
TRAPPC12-221ENST00000489032 DPYDQ12882 1025 aa11.7□□□□□ -0.54
TRAPPC12-221ENST00000489032 LRRC59Q96AG4 307 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-221ENST00000489032 OSBPL3Q9H4L5 887 aa11.7□□□□□ -0.54
TRAPPC12-221ENST00000489032 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
TRAPPC12-221ENST00000489032 SEC13P55735 322 aa11.69□□□□□ -0.54
TRAPPC12-221ENST00000489032 ESCO1Q5FWF5 840 aa11.69□□□□□ -0.54
TRAPPC12-221ENST00000489032 SIX5Q8N196 739 aa11.69□□□□□ -0.54
TRAPPC12-221ENST00000489032 HPS1Q92902 700 aa11.69□□□□□ -0.54
TRAPPC12-221ENST00000489032 MPHOSPH9Q99550 1183 aa11.69□□□□□ -0.54
TRAPPC12-221ENST00000489032 ADGRB3O60242 1522 aa11.69□□□□□ -0.54
TRAPPC12-221ENST00000489032 PLEKHG1Q9ULL1 1385 aa11.68□□□□□ -0.54
TRAPPC12-221ENST00000489032 LRP5O75197 1615 aa11.68□□□□□ -0.54
TRAPPC12-221ENST00000489032 EP400Q96L91 3159 aa11.68□□□□□ -0.54
TRAPPC12-221ENST00000489032 ZBTB7BO15156 539 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-221ENST00000489032 GFRA3O60609 400 aa11.68□□□□□ -0.54
TRAPPC12-221ENST00000489032 GNRH1P01148 92 aa11.68□□□□□ -0.54
TRAPPC12-221ENST00000489032 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
TRAPPC12-221ENST00000489032 E9PCH4 1651 aa11.68□□□□□ -0.54
TRAPPC12-221ENST00000489032 NOS1P29475 1434 aa11.68□□□□□ -0.54
TRAPPC12-221ENST00000489032 ADH1AP07327 375 aa11.67□□□□□ -0.54
TRAPPC12-221ENST00000489032 TIMP2P16035 220 aa11.67□□□□□ -0.54
TRAPPC12-221ENST00000489032 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-221ENST00000489032 CBLBQ13191 982 aa11.67□□□□□ -0.54
TRAPPC12-221ENST00000489032 PKDCCQ504Y2 493 aa11.67□□□□□ -0.54
TRAPPC12-221ENST00000489032 TRPC5Q9UL62 973 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-221ENST00000489032 KIAA1024Q9UPX6 916 aa11.67□□□□□ -0.54
TRAPPC12-221ENST00000489032 TBX22Q9Y458 520 aa11.67□□□□□ -0.54
TRAPPC12-221ENST00000489032 ASXL1Q8IXJ9 1541 aa11.66□□□□□ -0.54
TRAPPC12-221ENST00000489032 BACH1O14867 736 aa11.66□□□□□ -0.54
TRAPPC12-221ENST00000489032 CAPN5O15484 640 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-221ENST00000489032 UPP2O95045 317 aa11.66□□□□□ -0.54
TRAPPC12-221ENST00000489032 ADAMTS2O95450 1211 aa11.66□□□□□ -0.54
TRAPPC12-221ENST00000489032 USP21Q9UK80 565 aa11.66□□□□□ -0.54
TRAPPC12-221ENST00000489032 NHSL1Q5SYE7 1610 aa11.66□□□□□ -0.54
TRAPPC12-221ENST00000489032 PNPLA6Q8IY17 1366 aa11.66□□□□□ -0.54
TRAPPC12-221ENST00000489032 GDF10P55107 478 aa11.65□□□□□ -0.54
TRAPPC12-221ENST00000489032 TMEM164Q5U3C3 297 aa11.65□□□□□ -0.54
TRAPPC12-221ENST00000489032 STK32AQ8WU08 396 aa11.65□□□□□ -0.54
TRAPPC12-221ENST00000489032 HINFPQ9BQA5 517 aa11.65□□□□□ -0.54
TRAPPC12-221ENST00000489032 KLF16Q9BXK1 252 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-221ENST00000489032 ZMIZ1Q9ULJ6 1067 aa11.65□□□□□ -0.54
TRAPPC12-221ENST00000489032 LAPTM4AQ15012 233 aa11.64□□□□□ -0.55
TRAPPC12-221ENST00000489032 Q6ZVU0 165 aa11.64□□□□□ -0.55
TRAPPC12-221ENST00000489032 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRAPPC12-221ENST00000489032 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
TRAPPC12-221ENST00000489032 ZFYVE9O95405 1425 aa11.63□□□□□ -0.55
TRAPPC12-221ENST00000489032 DCCP43146 1447 aa11.63□□□□□ -0.55
TRAPPC12-221ENST00000489032 SFI1A8K8P3 1242 aa11.63□□□□□ -0.55
TRAPPC12-221ENST00000489032 NRG2O14511 850 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-221ENST00000489032 RELBQ01201 579 aa11.63□□□□□ -0.55
TRAPPC12-221ENST00000489032 NLRP3Q96P20 1036 aa11.63□□□□□ -0.55
TRAPPC12-221ENST00000489032 ARHGEF10LQ9HCE6 1279 aa11.63□□□□□ -0.55
TRAPPC12-221ENST00000489032 RIMS2Q9UQ26 1411 aa11.62□□□□□ -0.55
TRAPPC12-221ENST00000489032 DGAT1O75907 488 aa11.62□□□□□ -0.55
TRAPPC12-221ENST00000489032 PTGIRP43119 386 aa11.62□□□□□ -0.55
TRAPPC12-221ENST00000489032 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
TRAPPC12-221ENST00000489032 PCGF6Q9BYE7 350 aa11.62□□□□□ -0.55
TRAPPC12-221ENST00000489032 RAB6BQ9NRW1 208 aa11.62□□□□□ -0.55
TRAPPC12-221ENST00000489032 SERTAD1Q9UHV2 236 aa11.62□□□□□ -0.55
TRAPPC12-221ENST00000489032 PIK3R4Q99570 1358 aa11.62□□□□□ -0.55
TRAPPC12-221ENST00000489032 TRPM2O94759 1503 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms