RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 UBTFL1P0CB47 393 aaPredicted RBP20.13■□□□□ 0.81
CLDN11-208ENST00000488989 CASP7P55210 303 aa20.13■□□□□ 0.81
CLDN11-208ENST00000488989 PARP10Q53GL7 1025 aa20.13■□□□□ 0.81
CLDN11-208ENST00000488989 STK32BQ9NY57 414 aa20.13■□□□□ 0.81
CLDN11-208ENST00000488989 C9orf78Q9NZ63 289 aaPredicted RBP20.13■□□□□ 0.81
CLDN11-208ENST00000488989 PCDHB15Q9Y5E8 787 aa20.13■□□□□ 0.81
CLDN11-208ENST00000488989 PNPLA7Q6ZV29 1317 aa20.12■□□□□ 0.81
CLDN11-208ENST00000488989 GNAI2P04899 355 aa20.12■□□□□ 0.81
CLDN11-208ENST00000488989 HDAC5Q9UQL6 1122 aa20.12■□□□□ 0.81
CLDN11-208ENST00000488989 MYH3P11055 1940 aa20.12■□□□□ 0.81
CLDN11-208ENST00000488989 GPTP24298 496 aa20.11■□□□□ 0.81
CLDN11-208ENST00000488989 COL23A1Q86Y22 540 aaPredicted RBP20.11■□□□□ 0.81
CLDN11-208ENST00000488989 LAMB2P55268 1798 aa20.11■□□□□ 0.81
CLDN11-208ENST00000488989 PCCAP05165 728 aaPredicted RBP20.1■□□□□ 0.81
CLDN11-208ENST00000488989 GYS1P13807 737 aa20.1■□□□□ 0.81
CLDN11-208ENST00000488989 ILDR2Q71H61 639 aa20.1■□□□□ 0.81
CLDN11-208ENST00000488989 NIP7Q9Y221 180 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLDN11-208ENST00000488989 TBC1D9BQ66K14 1250 aa20.09■□□□□ 0.81
CLDN11-208ENST00000488989 ZBTB38Q8NAP3 1195 aaPredicted RBP20.09■□□□□ 0.81
CLDN11-208ENST00000488989 C1orf115Q9H7X2 142 aa20.09■□□□□ 0.81
CLDN11-208ENST00000488989 CDHR2Q9BYE9 1310 aa20.08■□□□□ 0.81
CLDN11-208ENST00000488989 SUSD4Q5VX71 490 aa20.08■□□□□ 0.81
CLDN11-208ENST00000488989 CEP85Q6P2H3 762 aa20.08■□□□□ 0.81
CLDN11-208ENST00000488989 RPAP2Q8IXW5 612 aaPredicted RBP20.08■□□□□ 0.81
CLDN11-208ENST00000488989 ANKRD44Q8N8A2 993 aa20.08■□□□□ 0.81
CLDN11-208ENST00000488989 KAZALD1Q96I82 304 aa20.08■□□□□ 0.81
CLDN11-208ENST00000488989 SUCLG2Q96I99 432 aa20.08■□□□□ 0.81
CLDN11-208ENST00000488989 LRRFIP2Q9Y608 721 aaKnown RBP20.08■□□□□ 0.81
CLDN11-208ENST00000488989 DDX60Q8IY21 1712 aaKnown RBP20.07■□□□□ 0.8
CLDN11-208ENST00000488989 HDAC1Q13547 482 aaPredicted RBP20.07■□□□□ 0.8
CLDN11-208ENST00000488989 UBE3BQ7Z3V4 1068 aa20.07■□□□□ 0.8
CLDN11-208ENST00000488989 PPP1R42Q7Z4L9 355 aa20.07■□□□□ 0.8
CLDN11-208ENST00000488989 PLA2G12BQ9BX93 195 aa20.07■□□□□ 0.8
CLDN11-208ENST00000488989 NTSR2O95665 410 aa20.06■□□□□ 0.8
CLDN11-208ENST00000488989 MTX1Q13505 466 aa20.06■□□□□ 0.8
CLDN11-208ENST00000488989 SIRT2Q8IXJ6 389 aa20.06■□□□□ 0.8
CLDN11-208ENST00000488989 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
CLDN11-208ENST00000488989 UTP14AQ9BVJ6 771 aaKnown RBP20.06■□□□□ 0.8
CLDN11-208ENST00000488989 TM4SF1P30408 202 aa20.05■□□□□ 0.8
CLDN11-208ENST00000488989 ATP8B2P98198 1209 aa20.05■□□□□ 0.8
CLDN11-208ENST00000488989 NFIXQ14938 502 aa20.05■□□□□ 0.8
CLDN11-208ENST00000488989 B4GALNT3Q6L9W6 998 aa20.05■□□□□ 0.8
CLDN11-208ENST00000488989 SETDB2Q96T68 719 aa20.05■□□□□ 0.8
CLDN11-208ENST00000488989 TRMT112Q9UI30 125 aaKnown RBP20.05■□□□□ 0.8
CLDN11-208ENST00000488989 CASZ1Q86V15 1759 aa20.05■□□□□ 0.8
CLDN11-208ENST00000488989 NRXN2Q9P2S2 1712 aa20.05■□□□□ 0.8
CLDN11-208ENST00000488989 RABL6Q3YEC7 729 aaPredicted RBP20.04■□□□□ 0.8
CLDN11-208ENST00000488989 NLGN1Q8N2Q7 840 aa20.04■□□□□ 0.8
CLDN11-208ENST00000488989 FAM89AQ96GI7 184 aa20.04■□□□□ 0.8
CLDN11-208ENST00000488989 CARMIL3Q8ND23 1372 aa20.04■□□□□ 0.8
CLDN11-208ENST00000488989 KDM2BQ8NHM5 1336 aa20.03■□□□□ 0.8
CLDN11-208ENST00000488989 SH3TC1Q8TE82 1336 aa20.03■□□□□ 0.8
CLDN11-208ENST00000488989 EPHA10Q5JZY3 1008 aa20.03■□□□□ 0.8
CLDN11-208ENST00000488989 JARID2Q92833 1246 aaPredicted RBP20.03■□□□□ 0.8
CLDN11-208ENST00000488989 NYXQ9GZU5 481 aa20.03■□□□□ 0.8
CLDN11-208ENST00000488989 RWDD1Q9H446 243 aaPredicted RBP20.03■□□□□ 0.8
CLDN11-208ENST00000488989 BICC1Q9H694 974 aaKnown RBP20.03■□□□□ 0.8
CLDN11-208ENST00000488989 IGHDP01880 384 aa20.02■□□□□ 0.8
CLDN11-208ENST00000488989 FOXO4P98177 505 aa20.02■□□□□ 0.8
CLDN11-208ENST00000488989 BICDL1Q6ZP65 573 aa20.02■□□□□ 0.8
CLDN11-208ENST00000488989 POLA2Q14181 598 aa20.01■□□□□ 0.79
CLDN11-208ENST00000488989 SSH3Q8TE77 659 aa20.01■□□□□ 0.79
CLDN11-208ENST00000488989 PNMA6EA0A0J9YXQ4 647 aa20■□□□□ 0.79
CLDN11-208ENST00000488989 IRS4O14654 1257 aaPredicted RBP20■□□□□ 0.79
CLDN11-208ENST00000488989 MSH5O43196 834 aa20■□□□□ 0.79
CLDN11-208ENST00000488989 HMMRO75330 724 aa20■□□□□ 0.79
CLDN11-208ENST00000488989 HSP90B1P14625 803 aaKnown RBP20■□□□□ 0.79
CLDN11-208ENST00000488989 RTL5Q5HYW3 569 aaPredicted RBP20■□□□□ 0.79
CLDN11-208ENST00000488989 SLC10A5Q5PT55 438 aa20■□□□□ 0.79
CLDN11-208ENST00000488989 SYNE4Q8N205 404 aa20■□□□□ 0.79
CLDN11-208ENST00000488989 SLC16A10Q8TF71 515 aa20■□□□□ 0.79
CLDN11-208ENST00000488989 RIC1Q4ADV7 1423 aa20■□□□□ 0.79
CLDN11-208ENST00000488989 PDE8AO60658 829 aa19.99■□□□□ 0.79
CLDN11-208ENST00000488989 CSF1RP07333 972 aa19.99■□□□□ 0.79
CLDN11-208ENST00000488989 TPTE2Q6XPS3 522 aa19.99■□□□□ 0.79
CLDN11-208ENST00000488989 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
CLDN11-208ENST00000488989 POLRMTO00411 1230 aaKnown RBP19.98■□□□□ 0.79
CLDN11-208ENST00000488989 DDR1Q08345 913 aa19.98■□□□□ 0.79
CLDN11-208ENST00000488989 NBPF5PQ86XG9 351 aaPredicted RBP19.98■□□□□ 0.79
CLDN11-208ENST00000488989 FAM177BA6PVY3 158 aa19.97■□□□□ 0.79
CLDN11-208ENST00000488989 SRGAP3O43295 1099 aa19.97■□□□□ 0.79
CLDN11-208ENST00000488989 SERPINB2P05120 415 aa19.97■□□□□ 0.79
CLDN11-208ENST00000488989 ERFEQ4G0M1 354 aa19.97■□□□□ 0.79
CLDN11-208ENST00000488989 NUTM1Q86Y26 1132 aa19.97■□□□□ 0.79
CLDN11-208ENST00000488989 SMC5Q8IY18 1101 aa19.97■□□□□ 0.79
CLDN11-208ENST00000488989 DCTPP1Q9H773 170 aa19.97■□□□□ 0.79
CLDN11-208ENST00000488989 ABCC12Q96J65 1359 aa19.96■□□□□ 0.79
CLDN11-208ENST00000488989 CTSWP56202 376 aa19.96■□□□□ 0.79
CLDN11-208ENST00000488989 LMBR1LQ6UX01 489 aa19.96■□□□□ 0.79
CLDN11-208ENST00000488989 ANKRD31Q8N7Z5 1873 aa19.95■□□□□ 0.78
CLDN11-208ENST00000488989 TNRC6CQ9HCJ0 1690 aaKnown RBP19.95■□□□□ 0.78
CLDN11-208ENST00000488989 RFX5P48382 616 aaPredicted RBP19.95■□□□□ 0.78
CLDN11-208ENST00000488989 PRR5LQ6MZQ0 368 aa19.95■□□□□ 0.78
CLDN11-208ENST00000488989 TTLL11Q8NHH1 800 aa19.95■□□□□ 0.78
CLDN11-208ENST00000488989 GCC1Q96CN9 775 aa19.95■□□□□ 0.78
CLDN11-208ENST00000488989 PDGFDQ9GZP0 370 aaPredicted RBP19.95■□□□□ 0.78
CLDN11-208ENST00000488989 RTL9Q8NET4 1388 aa19.95■□□□□ 0.78
CLDN11-208ENST00000488989 HCLS1P14317 486 aaPredicted RBP19.94■□□□□ 0.78
CLDN11-208ENST00000488989 CNBD1Q8NA66 436 aa19.94■□□□□ 0.78
CLDN11-208ENST00000488989 NOP58Q9Y2X3 529 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms