RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 ERC1Q8IUD2 1116 aa17.26■□□□□ 0.35
RPL13A-212ENST00000488946 TJP1Q07157 1748 aa17.25■□□□□ 0.35
RPL13A-212ENST00000488946 NUTM1Q86Y26 1132 aa17.25■□□□□ 0.35
RPL13A-212ENST00000488946 SMAP1Q8IYB5 467 aaPredicted RBP17.25■□□□□ 0.35
RPL13A-212ENST00000488946 MYD88Q99836 296 aa17.25■□□□□ 0.35
RPL13A-212ENST00000488946 ESYT1Q9BSJ8 1104 aa17.25■□□□□ 0.35
RPL13A-212ENST00000488946 BICC1Q9H694 974 aaKnown RBP17.25■□□□□ 0.35
RPL13A-212ENST00000488946 SPATA31A5Q5VU36 1347 aa17.25■□□□□ 0.35
RPL13A-212ENST00000488946 SPATA31A7Q8IWB4 1347 aa17.25■□□□□ 0.35
RPL13A-212ENST00000488946 CHMLP26374 656 aa17.25■□□□□ 0.35
RPL13A-212ENST00000488946 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
RPL13A-212ENST00000488946 CD2BP2O95400 341 aaKnown RBP17.24■□□□□ 0.35
RPL13A-212ENST00000488946 NAP1L2Q9ULW6 460 aaPredicted RBP17.24■□□□□ 0.35
RPL13A-212ENST00000488946 ITGB4P16144 1822 aa17.24■□□□□ 0.35
RPL13A-212ENST00000488946 K7ELQ4 463 aaPredicted RBP17.24■□□□□ 0.35
RPL13A-212ENST00000488946 PLBD2Q8NHP8 589 aa17.24■□□□□ 0.35
RPL13A-212ENST00000488946 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
RPL13A-212ENST00000488946 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
RPL13A-212ENST00000488946 NBPF14Q5TI25 921 aa17.23■□□□□ 0.35
RPL13A-212ENST00000488946 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
RPL13A-212ENST00000488946 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
RPL13A-212ENST00000488946 SPATA31A1Q5TZJ5 1347 aa17.23■□□□□ 0.35
RPL13A-212ENST00000488946 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
RPL13A-212ENST00000488946 CIZ1Q9ULV3 898 aaPredicted RBP17.22■□□□□ 0.35
RPL13A-212ENST00000488946 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
RPL13A-212ENST00000488946 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
RPL13A-212ENST00000488946 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
RPL13A-212ENST00000488946 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
RPL13A-212ENST00000488946 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.35
RPL13A-212ENST00000488946 PA2G4Q9UQ80 394 aaKnown RBP17.21■□□□□ 0.35
RPL13A-212ENST00000488946 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
RPL13A-212ENST00000488946 RILPL2Q969X0 211 aa17.21■□□□□ 0.35
RPL13A-212ENST00000488946 IL17RAQ96F46 866 aa17.21■□□□□ 0.35
RPL13A-212ENST00000488946 MAP7D2Q96T17 732 aa17.21■□□□□ 0.35
RPL13A-212ENST00000488946 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
RPL13A-212ENST00000488946 THRAP3Q9Y2W1 955 aaKnown RBP17.2■□□□□ 0.34
RPL13A-212ENST00000488946 CASP7P55210 303 aa17.2■□□□□ 0.34
RPL13A-212ENST00000488946 RAB3GAP1Q15042 981 aa17.2■□□□□ 0.34
RPL13A-212ENST00000488946 ONECUT3O60422 494 aaPredicted RBP17.19■□□□□ 0.34
RPL13A-212ENST00000488946 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
RPL13A-212ENST00000488946 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
RPL13A-212ENST00000488946 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
RPL13A-212ENST00000488946 SASH1O94885 1247 aa17.18■□□□□ 0.34
RPL13A-212ENST00000488946 FAM98CQ17RN3 349 aaKnown RBP17.18■□□□□ 0.34
RPL13A-212ENST00000488946 BARGINQ6ZT62 677 aa17.18■□□□□ 0.34
RPL13A-212ENST00000488946 KIAA1211Q6ZU35 1233 aa17.18■□□□□ 0.34
RPL13A-212ENST00000488946 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
RPL13A-212ENST00000488946 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
RPL13A-212ENST00000488946 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
RPL13A-212ENST00000488946 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
RPL13A-212ENST00000488946 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
RPL13A-212ENST00000488946 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
RPL13A-212ENST00000488946 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
RPL13A-212ENST00000488946 ANAPC15P60006 121 aa17.17■□□□□ 0.34
RPL13A-212ENST00000488946 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.34
RPL13A-212ENST00000488946 GAS2L3Q86XJ1 694 aa17.17■□□□□ 0.34
RPL13A-212ENST00000488946 SKOR2Q2VWA4 1001 aaPredicted RBP17.16■□□□□ 0.34
RPL13A-212ENST00000488946 A1BGP04217 495 aa17.16■□□□□ 0.34
RPL13A-212ENST00000488946 TTLL7Q6ZT98 887 aa17.16■□□□□ 0.34
RPL13A-212ENST00000488946 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
RPL13A-212ENST00000488946 A0A0G2JS52 829 aa17.15■□□□□ 0.34
RPL13A-212ENST00000488946 BCL9O00512 1426 aa17.15■□□□□ 0.34
RPL13A-212ENST00000488946 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
RPL13A-212ENST00000488946 IFIT2P09913 472 aaKnown RBP17.15■□□□□ 0.34
RPL13A-212ENST00000488946 PTMSP20962 102 aa17.15■□□□□ 0.34
RPL13A-212ENST00000488946 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
RPL13A-212ENST00000488946 ZHX1Q9UKY1 873 aaPredicted RBP17.15■□□□□ 0.34
RPL13A-212ENST00000488946 H7C1W4 665 aa17.15■□□□□ 0.34
RPL13A-212ENST00000488946 MCCP23508 829 aa17.15■□□□□ 0.34
RPL13A-212ENST00000488946 AACSQ86V21 672 aa17.15■□□□□ 0.34
RPL13A-212ENST00000488946 IL25Q9H293 177 aa17.15■□□□□ 0.34
RPL13A-212ENST00000488946 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
RPL13A-212ENST00000488946 A0A087WZG4 1122 aa17.14■□□□□ 0.33
RPL13A-212ENST00000488946 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
RPL13A-212ENST00000488946 SGSM2O43147 1006 aa17.14■□□□□ 0.33
RPL13A-212ENST00000488946 ST18O60284 1047 aa17.14■□□□□ 0.33
RPL13A-212ENST00000488946 PIGBQ92521 554 aa17.14■□□□□ 0.33
RPL13A-212ENST00000488946 CDCA7Q9BWT1 371 aaPredicted RBP17.14■□□□□ 0.33
RPL13A-212ENST00000488946 ANO2Q9NQ90 1003 aa17.14■□□□□ 0.33
RPL13A-212ENST00000488946 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.14■□□□□ 0.33
RPL13A-212ENST00000488946 IPO4Q8TEX9 1081 aaKnown RBP17.14■□□□□ 0.33
RPL13A-212ENST00000488946 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
RPL13A-212ENST00000488946 BRWD3Q6RI45 1802 aa17.13■□□□□ 0.33
RPL13A-212ENST00000488946 MAP4K4O95819 1239 aaPredicted RBP17.13■□□□□ 0.33
RPL13A-212ENST00000488946 UTP14CQ5TAP6 766 aaKnown RBP17.13■□□□□ 0.33
RPL13A-212ENST00000488946 TRIM44Q96DX7 344 aaPredicted RBP17.13■□□□□ 0.33
RPL13A-212ENST00000488946 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
RPL13A-212ENST00000488946 THSD7AQ9UPZ6 1657 aa17.13■□□□□ 0.33
RPL13A-212ENST00000488946 RAD50Q92878 1312 aa17.13■□□□□ 0.33
RPL13A-212ENST00000488946 PTPN12Q05209 780 aaKnown RBP17.13■□□□□ 0.33
RPL13A-212ENST00000488946 ATG3Q9NT62 314 aa17.13■□□□□ 0.33
RPL13A-212ENST00000488946 CWC25Q9NXE8 425 aaPredicted RBP17.13■□□□□ 0.33
RPL13A-212ENST00000488946 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
RPL13A-212ENST00000488946 TERF1P54274 439 aa17.12■□□□□ 0.33
RPL13A-212ENST00000488946 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
RPL13A-212ENST00000488946 PALD1Q9ULE6 856 aa17.12■□□□□ 0.33
RPL13A-212ENST00000488946 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
RPL13A-212ENST00000488946 HSPA4P34932 840 aa17.11■□□□□ 0.33
RPL13A-212ENST00000488946 FOXO4P98177 505 aa17.11■□□□□ 0.33
RPL13A-212ENST00000488946 SIL1Q9H173 461 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms