RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 NFIXQ14938 502 aa15.55■□□□□ 0.08
TRAIP-209ENST00000488860 NLRP10Q86W26 655 aa15.55■□□□□ 0.08
TRAIP-209ENST00000488860 ZNF34Q8IZ26 560 aa15.55■□□□□ 0.08
TRAIP-209ENST00000488860 SETDB2Q96T68 719 aa15.55■□□□□ 0.08
TRAIP-209ENST00000488860 ALDH1L1O75891 902 aa15.54■□□□□ 0.08
TRAIP-209ENST00000488860 ZBTB7AO95365 584 aa15.54■□□□□ 0.08
TRAIP-209ENST00000488860 NLGN1Q8N2Q7 840 aa15.54■□□□□ 0.08
TRAIP-209ENST00000488860 CCDC191Q8NCU4 936 aa15.54■□□□□ 0.08
TRAIP-209ENST00000488860 TNRC6CQ9HCJ0 1690 aaKnown RBP15.54■□□□□ 0.08
TRAIP-209ENST00000488860 ANKRD31Q8N7Z5 1873 aa15.53■□□□□ 0.08
TRAIP-209ENST00000488860 GCKRQ14397 625 aa15.53■□□□□ 0.08
TRAIP-209ENST00000488860 PARP10Q53GL7 1025 aa15.53■□□□□ 0.08
TRAIP-209ENST00000488860 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
TRAIP-209ENST00000488860 SUSD4Q5VX71 490 aa15.53■□□□□ 0.08
TRAIP-209ENST00000488860 PPP1R42Q7Z4L9 355 aa15.53■□□□□ 0.08
TRAIP-209ENST00000488860 JARID2Q92833 1246 aaPredicted RBP15.53■□□□□ 0.08
TRAIP-209ENST00000488860 C9orf78Q9NZ63 289 aaPredicted RBP15.53■□□□□ 0.08
TRAIP-209ENST00000488860 SPEF2Q9C093 1822 aa15.52■□□□□ 0.08
TRAIP-209ENST00000488860 MMP10P09238 476 aa15.52■□□□□ 0.08
TRAIP-209ENST00000488860 DDR1Q08345 913 aa15.52■□□□□ 0.08
TRAIP-209ENST00000488860 NBPF5PQ86XG9 351 aaPredicted RBP15.52■□□□□ 0.08
TRAIP-209ENST00000488860 SLC16A10Q8TF71 515 aa15.52■□□□□ 0.08
TRAIP-209ENST00000488860 UTP14AQ9BVJ6 771 aaKnown RBP15.52■□□□□ 0.08
TRAIP-209ENST00000488860 TRMT112Q9UI30 125 aaKnown RBP15.52■□□□□ 0.08
TRAIP-209ENST00000488860 DDX19BQ9UMR2 479 aa15.52■□□□□ 0.08
TRAIP-209ENST00000488860 CACNA1SQ13698 1873 aa15.52■□□□□ 0.07
TRAIP-209ENST00000488860 IBTKQ9P2D0 1353 aaPredicted RBP15.51■□□□□ 0.07
TRAIP-209ENST00000488860 GRM8O00222 908 aa15.51■□□□□ 0.07
TRAIP-209ENST00000488860 NTSR2O95665 410 aa15.51■□□□□ 0.07
TRAIP-209ENST00000488860 GTF2E1P29083 439 aaPredicted RBP15.51■□□□□ 0.07
TRAIP-209ENST00000488860 UBE3BQ7Z3V4 1068 aa15.51■□□□□ 0.07
TRAIP-209ENST00000488860 MEIS3Q99687 375 aa15.51■□□□□ 0.07
TRAIP-209ENST00000488860 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
TRAIP-209ENST00000488860 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
TRAIP-209ENST00000488860 PARP3Q9Y6F1 533 aa15.51■□□□□ 0.07
TRAIP-209ENST00000488860 POLRMTO00411 1230 aaKnown RBP15.5■□□□□ 0.07
TRAIP-209ENST00000488860 UBTFL1P0CB47 393 aaPredicted RBP15.5■□□□□ 0.07
TRAIP-209ENST00000488860 TM4SF1P30408 202 aa15.5■□□□□ 0.07
TRAIP-209ENST00000488860 TRIM28Q13263 835 aaKnown RBP15.5■□□□□ 0.07
TRAIP-209ENST00000488860 NUTM1Q86Y26 1132 aa15.5■□□□□ 0.07
TRAIP-209ENST00000488860 CNBD1Q8NA66 436 aa15.5■□□□□ 0.07
TRAIP-209ENST00000488860 EXOC6Q8TAG9 804 aa15.5■□□□□ 0.07
TRAIP-209ENST00000488860 FAM89AQ96GI7 184 aa15.5■□□□□ 0.07
TRAIP-209ENST00000488860 MTFR1LQ9H019 292 aa15.5■□□□□ 0.07
TRAIP-209ENST00000488860 ABCC12Q96J65 1359 aa15.49■□□□□ 0.07
TRAIP-209ENST00000488860 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
TRAIP-209ENST00000488860 COL11A2P13942 1736 aaPredicted RBP15.49■□□□□ 0.07
TRAIP-209ENST00000488860 SERPINB2P05120 415 aa15.49■□□□□ 0.07
TRAIP-209ENST00000488860 PCCAP05165 728 aaPredicted RBP15.49■□□□□ 0.07
TRAIP-209ENST00000488860 CCDC24Q8N4L8 307 aa15.49■□□□□ 0.07
TRAIP-209ENST00000488860 ZBTB38Q8NAP3 1195 aaPredicted RBP15.49■□□□□ 0.07
TRAIP-209ENST00000488860 C1orf115Q9H7X2 142 aa15.49■□□□□ 0.07
TRAIP-209ENST00000488860 KIF13BQ9NQT8 1826 aa15.48■□□□□ 0.07
TRAIP-209ENST00000488860 GNAI3P08754 354 aa15.48■□□□□ 0.07
TRAIP-209ENST00000488860 NBPF7P0C2Y1 421 aaPredicted RBP15.48■□□□□ 0.07
TRAIP-209ENST00000488860 POLD1P28340 1107 aa15.48■□□□□ 0.07
TRAIP-209ENST00000488860 ST5P78524 1137 aa15.48■□□□□ 0.07
TRAIP-209ENST00000488860 ERFEQ4G0M1 354 aa15.48■□□□□ 0.07
TRAIP-209ENST00000488860 SYNE4Q8N205 404 aa15.48■□□□□ 0.07
TRAIP-209ENST00000488860 USP44Q9H0E7 712 aa15.48■□□□□ 0.07
TRAIP-209ENST00000488860 H7C1W4 665 aa15.47■□□□□ 0.07
TRAIP-209ENST00000488860 PRR5LQ6MZQ0 368 aa15.47■□□□□ 0.07
TRAIP-209ENST00000488860 TPTE2Q6XPS3 522 aa15.47■□□□□ 0.07
TRAIP-209ENST00000488860 SUCLG2Q96I99 432 aa15.47■□□□□ 0.07
TRAIP-209ENST00000488860 CHMP4BQ9H444 224 aaKnown RBP15.47■□□□□ 0.07
TRAIP-209ENST00000488860 UTYO14607 1347 aa15.46■□□□□ 0.07
TRAIP-209ENST00000488860 CDHR2Q9BYE9 1310 aa15.46■□□□□ 0.07
TRAIP-209ENST00000488860 TAF1P21675 1872 aa15.46■□□□□ 0.07
TRAIP-209ENST00000488860 IRS4O14654 1257 aaPredicted RBP15.46■□□□□ 0.07
TRAIP-209ENST00000488860 ZBTB7BO15156 539 aaPredicted RBP15.46■□□□□ 0.07
TRAIP-209ENST00000488860 HCLS1P14317 486 aaPredicted RBP15.46■□□□□ 0.07
TRAIP-209ENST00000488860 CASP7P55210 303 aa15.46■□□□□ 0.07
TRAIP-209ENST00000488860 LRRFIP2Q9Y608 721 aaKnown RBP15.46■□□□□ 0.07
TRAIP-209ENST00000488860 DLEC1Q9Y238 1755 aa15.45■□□□□ 0.06
TRAIP-209ENST00000488860 GNAI2P04899 355 aa15.45■□□□□ 0.06
TRAIP-209ENST00000488860 CHMP3Q9Y3E7 222 aa15.44■□□□□ 0.06
TRAIP-209ENST00000488860 RIC1Q4ADV7 1423 aa15.43■□□□□ 0.06
TRAIP-209ENST00000488860 C10orf71Q711Q0 1435 aa15.43■□□□□ 0.06
TRAIP-209ENST00000488860 PDE8AO60658 829 aa15.43■□□□□ 0.06
TRAIP-209ENST00000488860 KLHL34Q8N239 644 aa15.43■□□□□ 0.06
TRAIP-209ENST00000488860 CCDC85AQ96PX6 553 aaPredicted RBP15.43■□□□□ 0.06
TRAIP-209ENST00000488860 BICC1Q9H694 974 aaKnown RBP15.43■□□□□ 0.06
TRAIP-209ENST00000488860 SPON1Q9HCB6 807 aa15.43■□□□□ 0.06
TRAIP-209ENST00000488860 ZBTB40Q9NUA8 1239 aa15.43■□□□□ 0.06
TRAIP-209ENST00000488860 HDAC5Q9UQL6 1122 aa15.43■□□□□ 0.06
TRAIP-209ENST00000488860 KIAA1551Q9HCM1 1747 aa15.43■□□□□ 0.06
TRAIP-209ENST00000488860 HSP90B1P14625 803 aaKnown RBP15.42■□□□□ 0.06
TRAIP-209ENST00000488860 CTSWP56202 376 aa15.42■□□□□ 0.06
TRAIP-209ENST00000488860 EPHA10Q5JZY3 1008 aa15.42■□□□□ 0.06
TRAIP-209ENST00000488860 KAZALD1Q96I82 304 aa15.41■□□□□ 0.06
TRAIP-209ENST00000488860 PTGER2P43116 358 aa15.4■□□□□ 0.06
TRAIP-209ENST00000488860 FOXO4P98177 505 aa15.4■□□□□ 0.06
TRAIP-209ENST00000488860 LMBR1LQ6UX01 489 aa15.4■□□□□ 0.06
TRAIP-209ENST00000488860 C3orf67Q6ZVT6 689 aa15.4■□□□□ 0.06
TRAIP-209ENST00000488860 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
TRAIP-209ENST00000488860 NLRP3Q96P20 1036 aa15.4■□□□□ 0.06
TRAIP-209ENST00000488860 PLA2G12BQ9BX93 195 aa15.4■□□□□ 0.06
TRAIP-209ENST00000488860 PPP1R1BQ9UD71 204 aaPredicted RBP15.4■□□□□ 0.06
TRAIP-209ENST00000488860 LRP5O75197 1615 aa15.39■□□□□ 0.05
TRAIP-209ENST00000488860 A0A1B0GUL6 1792 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms