RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
PDPN-206ENST00000488631 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
PDPN-206ENST00000488631 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
PDPN-206ENST00000488631 PLBD2Q8NHP8 589 aa12.6□□□□□ -0.39
PDPN-206ENST00000488631 PHAXQ9H814 394 aaKnown RBP12.6□□□□□ -0.39
PDPN-206ENST00000488631 TRMT112Q9UI30 125 aaKnown RBP12.6□□□□□ -0.39
PDPN-206ENST00000488631 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
PDPN-206ENST00000488631 RGL2O15211 777 aa12.59□□□□□ -0.39
PDPN-206ENST00000488631 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
PDPN-206ENST00000488631 ERFEQ4G0M1 354 aa12.59□□□□□ -0.39
PDPN-206ENST00000488631 SUSD4Q5VX71 490 aa12.59□□□□□ -0.39
PDPN-206ENST00000488631 TTLL6Q8N841 843 aa12.59□□□□□ -0.39
PDPN-206ENST00000488631 RPGRQ92834 1020 aaKnown RBP12.59□□□□□ -0.39
PDPN-206ENST00000488631 MYD88Q99836 296 aa12.59□□□□□ -0.39
PDPN-206ENST00000488631 HAX1O00165 279 aa12.58□□□□□ -0.4
PDPN-206ENST00000488631 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.4
PDPN-206ENST00000488631 FKBP5Q13451 457 aaPredicted RBP12.58□□□□□ -0.4
PDPN-206ENST00000488631 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
PDPN-206ENST00000488631 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
PDPN-206ENST00000488631 LAMB4A4D0S4 1761 aa12.58□□□□□ -0.4
PDPN-206ENST00000488631 PXDNLA1KZ92 1463 aa12.58□□□□□ -0.4
PDPN-206ENST00000488631 ZNF34Q8IZ26 560 aa12.57□□□□□ -0.4
PDPN-206ENST00000488631 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
PDPN-206ENST00000488631 MASTLQ96GX5 879 aa12.57□□□□□ -0.4
PDPN-206ENST00000488631 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
PDPN-206ENST00000488631 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
PDPN-206ENST00000488631 VAMP4O75379 141 aa12.56□□□□□ -0.4
PDPN-206ENST00000488631 NPR1P16066 1061 aa12.56□□□□□ -0.4
PDPN-206ENST00000488631 LRP10Q7Z4F1 713 aa12.56□□□□□ -0.4
PDPN-206ENST00000488631 NLRP10Q86W26 655 aa12.56□□□□□ -0.4
PDPN-206ENST00000488631 UBN2Q6ZU65 1347 aa12.56□□□□□ -0.4
PDPN-206ENST00000488631 PI4KAP2A4QPH2 592 aa12.55□□□□□ -0.4
PDPN-206ENST00000488631 C21orf2O43822 256 aa12.55□□□□□ -0.4
PDPN-206ENST00000488631 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
PDPN-206ENST00000488631 KCNA3P22001 575 aa12.55□□□□□ -0.4
PDPN-206ENST00000488631 STYK1Q6J9G0 422 aa12.55□□□□□ -0.4
PDPN-206ENST00000488631 KSR2Q6VAB6 950 aa12.55□□□□□ -0.4
PDPN-206ENST00000488631 PI4KAP1Q8N8J0 262 aa12.55□□□□□ -0.4
PDPN-206ENST00000488631 CDCA7LQ96GN5 454 aa12.55□□□□□ -0.4
PDPN-206ENST00000488631 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
PDPN-206ENST00000488631 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
PDPN-206ENST00000488631 ATP10DQ9P241 1426 aa12.54□□□□□ -0.4
PDPN-206ENST00000488631 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
PDPN-206ENST00000488631 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
PDPN-206ENST00000488631 FLIIQ13045 1269 aa12.54□□□□□ -0.4
PDPN-206ENST00000488631 G2E3Q7L622 706 aa12.54□□□□□ -0.4
PDPN-206ENST00000488631 FAM89AQ96GI7 184 aa12.54□□□□□ -0.4
PDPN-206ENST00000488631 CWC25Q9NXE8 425 aaPredicted RBP12.54□□□□□ -0.4
PDPN-206ENST00000488631 SCN7AQ01118 1682 aa12.54□□□□□ -0.4
PDPN-206ENST00000488631 COL24A1Q17RW2 1714 aa12.54□□□□□ -0.4
PDPN-206ENST00000488631 NTSR2O95665 410 aa12.53□□□□□ -0.4
PDPN-206ENST00000488631 SRGNP10124 158 aa12.53□□□□□ -0.4
PDPN-206ENST00000488631 HSP90B1P14625 803 aaKnown RBP12.53□□□□□ -0.4
PDPN-206ENST00000488631 SLC4A10Q6U841 1118 aa12.53□□□□□ -0.4
PDPN-206ENST00000488631 ZNF526Q8TF50 670 aaPredicted RBP12.53□□□□□ -0.4
PDPN-206ENST00000488631 METTL22Q9BUU2 404 aaPredicted RBP12.53□□□□□ -0.4
PDPN-206ENST00000488631 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
PDPN-206ENST00000488631 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.41
PDPN-206ENST00000488631 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.41
PDPN-206ENST00000488631 JARID2Q92833 1246 aaPredicted RBP12.52□□□□□ -0.41
PDPN-206ENST00000488631 BCL2L13Q9BXK5 485 aa12.52□□□□□ -0.41
PDPN-206ENST00000488631 IRS4O14654 1257 aaPredicted RBP12.51□□□□□ -0.41
PDPN-206ENST00000488631 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
PDPN-206ENST00000488631 ISCA1Q9BUE6 129 aa12.51□□□□□ -0.41
PDPN-206ENST00000488631 SMC4Q9NTJ3 1288 aa12.51□□□□□ -0.41
PDPN-206ENST00000488631 RNF181Q9P0P0 153 aa12.51□□□□□ -0.41
PDPN-206ENST00000488631 ZNF521Q96K83 1311 aa12.51□□□□□ -0.41
PDPN-206ENST00000488631 ABCC12Q96J65 1359 aa12.51□□□□□ -0.41
PDPN-206ENST00000488631 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
PDPN-206ENST00000488631 CCDC191Q8NCU4 936 aa12.5□□□□□ -0.41
PDPN-206ENST00000488631 DNAAF4Q8WXU2 420 aa12.5□□□□□ -0.41
PDPN-206ENST00000488631 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
PDPN-206ENST00000488631 RNF123Q5XPI4 1314 aa12.5□□□□□ -0.41
PDPN-206ENST00000488631 N4BP2Q86UW6 1770 aaPredicted RBP12.5□□□□□ -0.41
PDPN-206ENST00000488631 BCORQ6W2J9 1755 aa12.49□□□□□ -0.41
PDPN-206ENST00000488631 IBTKQ9P2D0 1353 aaPredicted RBP12.49□□□□□ -0.41
PDPN-206ENST00000488631 F6X3S4 739 aa12.49□□□□□ -0.41
PDPN-206ENST00000488631 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
PDPN-206ENST00000488631 RASSF7Q02833 373 aa12.49□□□□□ -0.41
PDPN-206ENST00000488631 CWF19L2Q2TBE0 894 aaKnown RBP12.49□□□□□ -0.41
PDPN-206ENST00000488631 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
PDPN-206ENST00000488631 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
PDPN-206ENST00000488631 TRIM28Q13263 835 aaKnown RBP12.48□□□□□ -0.41
PDPN-206ENST00000488631 SLC10A5Q5PT55 438 aa12.48□□□□□ -0.41
PDPN-206ENST00000488631 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
PDPN-206ENST00000488631 ZNF784Q8NCA9 323 aaPredicted RBP12.48□□□□□ -0.41
PDPN-206ENST00000488631 TAOK3Q9H2K8 898 aa12.48□□□□□ -0.41
PDPN-206ENST00000488631 AFDNP55196 1824 aaKnown RBP12.47□□□□□ -0.41
PDPN-206ENST00000488631 LMNB1P20700 586 aa12.47□□□□□ -0.41
PDPN-206ENST00000488631 UBE3BQ7Z3V4 1068 aa12.47□□□□□ -0.41
PDPN-206ENST00000488631 RTKN2Q8IZC4 609 aa12.47□□□□□ -0.41
PDPN-206ENST00000488631 SSH1Q8WYL5 1049 aa12.47□□□□□ -0.41
PDPN-206ENST00000488631 CRAMP1Q96RY5 1269 aa12.47□□□□□ -0.41
PDPN-206ENST00000488631 GPBP1L1Q9HC44 474 aaPredicted RBP12.47□□□□□ -0.41
PDPN-206ENST00000488631 C9orf78Q9NZ63 289 aaPredicted RBP12.47□□□□□ -0.41
PDPN-206ENST00000488631 CHMP3Q9Y3E7 222 aa12.47□□□□□ -0.41
PDPN-206ENST00000488631 ADCY9O60503 1353 aa12.46□□□□□ -0.41
PDPN-206ENST00000488631 KLRG2A4D1S0 409 aaPredicted RBP12.46□□□□□ -0.41
PDPN-206ENST00000488631 NEURL1BA8MQ27 555 aa12.46□□□□□ -0.41
PDPN-206ENST00000488631 PCCAP05165 728 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms