RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 COLQQ9Y215 455 aaPredicted RBP12.83□□□□□ -0.36
SUPT20H-218ENST00000488590 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
SUPT20H-218ENST00000488590 STARD3NLO95772 234 aa12.82□□□□□ -0.36
SUPT20H-218ENST00000488590 CEP290O15078 2479 aa12.82□□□□□ -0.36
SUPT20H-218ENST00000488590 NPHP1O15259 732 aa12.81□□□□□ -0.36
SUPT20H-218ENST00000488590 LARGE2Q8N3Y3 721 aa12.81□□□□□ -0.36
SUPT20H-218ENST00000488590 TRPM4Q8TD43 1214 aa12.81□□□□□ -0.36
SUPT20H-218ENST00000488590 CCDC102AQ96A19 550 aa12.81□□□□□ -0.36
SUPT20H-218ENST00000488590 AKAP11Q9UKA4 1901 aa12.8□□□□□ -0.36
SUPT20H-218ENST00000488590 ALDH1B1P30837 517 aa12.8□□□□□ -0.36
SUPT20H-218ENST00000488590 CXCL9Q07325 125 aa12.8□□□□□ -0.36
SUPT20H-218ENST00000488590 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
SUPT20H-218ENST00000488590 ZNF296Q8WUU4 475 aaPredicted RBP12.8□□□□□ -0.36
SUPT20H-218ENST00000488590 NPC1L1Q9UHC9 1359 aa12.8□□□□□ -0.36
SUPT20H-218ENST00000488590 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
SUPT20H-218ENST00000488590 A1BGP04217 495 aa12.79□□□□□ -0.36
SUPT20H-218ENST00000488590 SLC10A3P09131 477 aa12.79□□□□□ -0.36
SUPT20H-218ENST00000488590 GMPSP49915 693 aaPredicted RBP12.79□□□□□ -0.36
SUPT20H-218ENST00000488590 CRY2Q49AN0 593 aa12.79□□□□□ -0.36
SUPT20H-218ENST00000488590 USP48Q86UV5 1035 aa12.79□□□□□ -0.36
SUPT20H-218ENST00000488590 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
SUPT20H-218ENST00000488590 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
SUPT20H-218ENST00000488590 ZNF330Q9Y3S2 320 aaPredicted RBP12.79□□□□□ -0.36
SUPT20H-218ENST00000488590 SHTN1A0MZ66 631 aa12.78□□□□□ -0.36
SUPT20H-218ENST00000488590 ZNF157P51786 506 aaPredicted RBP12.78□□□□□ -0.36
SUPT20H-218ENST00000488590 CC2D2BQ6DHV5 1058 aa12.78□□□□□ -0.36
SUPT20H-218ENST00000488590 SULT6B1Q6IMI4 303 aa12.78□□□□□ -0.36
SUPT20H-218ENST00000488590 FBXO46Q6PJ61 603 aaPredicted RBP12.78□□□□□ -0.36
SUPT20H-218ENST00000488590 GBA2Q9HCG7 927 aaPredicted RBP12.78□□□□□ -0.36
SUPT20H-218ENST00000488590 HEG1Q9ULI3 1381 aa12.78□□□□□ -0.36
SUPT20H-218ENST00000488590 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
SUPT20H-218ENST00000488590 CLEC4GQ6UXB4 293 aa12.77□□□□□ -0.37
SUPT20H-218ENST00000488590 DZIP3Q86Y13 1208 aaKnown RBP12.77□□□□□ -0.37
SUPT20H-218ENST00000488590 PITPNM2Q9BZ72 1349 aa12.77□□□□□ -0.37
SUPT20H-218ENST00000488590 TPTE2Q6XPS3 522 aa12.76□□□□□ -0.37
SUPT20H-218ENST00000488590 NIM1KQ8IY84 436 aa12.76□□□□□ -0.37
SUPT20H-218ENST00000488590 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
SUPT20H-218ENST00000488590 CDHR2Q9BYE9 1310 aa12.76□□□□□ -0.37
SUPT20H-218ENST00000488590 TBC1D8O95759 1140 aa12.75□□□□□ -0.37
SUPT20H-218ENST00000488590 KIAA0100Q14667 2235 aaKnown RBP12.75□□□□□ -0.37
SUPT20H-218ENST00000488590 LAMA3Q16787 3333 aa12.75□□□□□ -0.37
SUPT20H-218ENST00000488590 AOC3Q16853 763 aa12.75□□□□□ -0.37
SUPT20H-218ENST00000488590 HDAC9Q9UKV0 1011 aa12.75□□□□□ -0.37
SUPT20H-218ENST00000488590 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
SUPT20H-218ENST00000488590 HOXA10P31260 410 aaPredicted RBP12.74□□□□□ -0.37
SUPT20H-218ENST00000488590 NOM1Q5C9Z4 860 aaKnown RBP12.74□□□□□ -0.37
SUPT20H-218ENST00000488590 TEX13AQ9BXU3 409 aaPredicted RBP12.74□□□□□ -0.37
SUPT20H-218ENST00000488590 ZNRF3Q9ULT6 936 aa12.74□□□□□ -0.37
SUPT20H-218ENST00000488590 PPIP5K2O43314 1243 aa12.73□□□□□ -0.37
SUPT20H-218ENST00000488590 IL13P35225 146 aa12.73□□□□□ -0.37
SUPT20H-218ENST00000488590 GRIPAP1Q4V328 841 aa12.73□□□□□ -0.37
SUPT20H-218ENST00000488590 RASAL3Q86YV0 1011 aa12.73□□□□□ -0.37
SUPT20H-218ENST00000488590 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
SUPT20H-218ENST00000488590 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
SUPT20H-218ENST00000488590 RIC1Q4ADV7 1423 aa12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 RBBP6Q7Z6E9 1792 aaKnown RBP12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 ADM5C9JUS6 153 aa12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 GPR25O00155 361 aa12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 EGFRP00533 1210 aa12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 ZNF790Q6PG37 636 aa12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 VPS33BQ9H267 617 aa12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 CNOT7Q9UIV1 285 aaKnown RBP12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 NIP7Q9Y221 180 aaKnown RBP eCLIP12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 UNC80Q8N2C7 3258 aa12.72□□□□□ -0.37
SUPT20H-218ENST00000488590 PAPPA2Q9BXP8 1791 aa12.71□□□□□ -0.37
SUPT20H-218ENST00000488590 KIF7Q2M1P5 1343 aa12.71□□□□□ -0.37
SUPT20H-218ENST00000488590 FAM177BA6PVY3 158 aa12.71□□□□□ -0.37
SUPT20H-218ENST00000488590 RGL2O15211 777 aa12.71□□□□□ -0.37
SUPT20H-218ENST00000488590 MTHFSDQ2M296 383 aaKnown RBP12.71□□□□□ -0.37
SUPT20H-218ENST00000488590 KRT26Q7Z3Y9 468 aa12.71□□□□□ -0.37
SUPT20H-218ENST00000488590 TTC5Q8N0Z6 440 aa12.71□□□□□ -0.37
SUPT20H-218ENST00000488590 RAD17O75943 681 aa12.7□□□□□ -0.38
SUPT20H-218ENST00000488590 EN2P19622 333 aaPredicted RBP12.7□□□□□ -0.38
SUPT20H-218ENST00000488590 SAMD7Q7Z3H4 446 aa12.7□□□□□ -0.38
SUPT20H-218ENST00000488590 RTFDC1Q9BY42 306 aaPredicted RBP12.7□□□□□ -0.38
SUPT20H-218ENST00000488590 R3HDMLQ9H3Y0 253 aa12.7□□□□□ -0.38
SUPT20H-218ENST00000488590 USP16Q9Y5T5 823 aa12.7□□□□□ -0.38
SUPT20H-218ENST00000488590 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
SUPT20H-218ENST00000488590 YDJCA8MPS7 323 aa12.69□□□□□ -0.38
SUPT20H-218ENST00000488590 HLFQ16534 295 aa12.69□□□□□ -0.38
SUPT20H-218ENST00000488590 CDCA8Q53HL2 280 aa12.69□□□□□ -0.38
SUPT20H-218ENST00000488590 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
SUPT20H-218ENST00000488590 MICALL2Q8IY33 904 aa12.69□□□□□ -0.38
SUPT20H-218ENST00000488590 CRAMP1Q96RY5 1269 aa12.69□□□□□ -0.38
SUPT20H-218ENST00000488590 TCERG1O14776 1098 aaKnown RBP12.68□□□□□ -0.38
SUPT20H-218ENST00000488590 PPEF1O14829 653 aaPredicted RBP12.68□□□□□ -0.38
SUPT20H-218ENST00000488590 KCNQ3O43525 872 aa12.68□□□□□ -0.38
SUPT20H-218ENST00000488590 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
SUPT20H-218ENST00000488590 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
SUPT20H-218ENST00000488590 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
SUPT20H-218ENST00000488590 CFHR5Q9BXR6 569 aa12.68□□□□□ -0.38
SUPT20H-218ENST00000488590 ZNF652Q9Y2D9 606 aa12.68□□□□□ -0.38
SUPT20H-218ENST00000488590 VCANP13611 3396 aa12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 SIPA1L3O60292 1781 aaPredicted RBP12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 NBPF26B4DH59 902 aa12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 H0YGN5 161 aa12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 H7C1D1 291 aa12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 TM4SF4P48230 202 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms